EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000019746 (Gene tree)
Gene ID: 102234609
Gene Symbol: pop7
Alias: fj61g07|wu:fj61g07|zgc:103779
Full Name: POP7 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 456 bases
Position: chr14:19917554-19918009
Accession: 102234609
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000019793	Alba	PF01918.21	7.9e-12	1	1
ENSXMAP00000019793	Rpp20	PF12328.8	6.5e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000019821	-	456	XM_005800419	ENSXMAP00000019793	151 (aa)	XP_005800476	M4AZ98

Gene Model

Click here to download ENSXMAG00000019746's gene model file

Pathways

Pathway ID	Pathway Name	Source
xma03008	Ribosome biogenesis in eukaryotes	KEGG
xma03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000019746's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000019746	pop7	82	72.093	ENSG00000172336	POP7	89	74.194	Homo_sapiens
ENSXMAG00000019746	pop7	89	97.015	ENSAPOG00000015722	pop7	98	97.015	Acanthochromis_polyacanthus
ENSXMAG00000019746	pop7	83	96.825	ENSACIG00000022071	pop7	93	96.825	Amphilophus_citrinellus
ENSXMAG00000019746	pop7	98	93.919	ENSAOCG00000021222	pop7	97	93.919	Amphiprion_ocellaris
ENSXMAG00000019746	pop7	98	93.919	ENSAPEG00000018819	pop7	97	93.919	Amphiprion_percula
ENSXMAG00000019746	pop7	83	98.400	ENSATEG00000017615	pop7	83	98.400	Anabas_testudineus
ENSXMAG00000019746	pop7	82	72.093	ENSANAG00000019054	POP7	91	72.093	Aotus_nancymaae
ENSXMAG00000019746	pop7	100	92.715	ENSACLG00000018898	pop7	100	92.715	Astatotilapia_calliptera
ENSXMAG00000019746	pop7	80	92.623	ENSAMXG00000025789	pop7	87	92.623	Astyanax_mexicanus
ENSXMAG00000019746	pop7	82	72.093	ENSCJAG00000015056	POP7	91	72.093	Callithrix_jacchus
ENSXMAG00000019746	pop7	82	72.093	ENSCAFG00000014205	POP7	91	72.093	Canis_familiaris
ENSXMAG00000019746	pop7	82	72.093	ENSCAFG00020013863	POP7	91	72.093	Canis_lupus_dingo
ENSXMAG00000019746	pop7	82	72.093	ENSCHIG00000013484	POP7	91	72.093	Capra_hircus
ENSXMAG00000019746	pop7	82	72.868	ENSTSYG00000035016	POP7	91	72.868	Carlito_syrichta
ENSXMAG00000019746	pop7	82	72.868	ENSCPOG00000005767	POP7	91	72.868	Cavia_porcellus
ENSXMAG00000019746	pop7	82	72.093	ENSCCAG00000008898	POP7	91	72.093	Cebus_capucinus
ENSXMAG00000019746	pop7	82	72.093	ENSCATG00000010371	POP7	91	72.093	Cercocebus_atys
ENSXMAG00000019746	pop7	82	72.868	ENSCLAG00000001541	POP7	91	72.868	Chinchilla_lanigera
ENSXMAG00000019746	pop7	82	72.093	ENSCSAG00000017937	POP7	91	72.093	Chlorocebus_sabaeus
ENSXMAG00000019746	pop7	82	72.093	ENSCANG00000000652	POP7	91	72.093	Colobus_angolensis_palliatus
ENSXMAG00000019746	pop7	82	72.093	ENSCGRG00001010593	Pop7	91	72.093	Cricetulus_griseus_chok1gshd
ENSXMAG00000019746	pop7	82	72.093	ENSCGRG00000019940	Pop7	91	72.093	Cricetulus_griseus_crigri
ENSXMAG00000019746	pop7	84	95.276	ENSCSEG00000013197	pop7	98	95.276	Cynoglossus_semilaevis
ENSXMAG00000019746	pop7	100	94.040	ENSCVAG00000016728	pop7	100	94.040	Cyprinodon_variegatus
ENSXMAG00000019746	pop7	99	80.000	ENSDARG00000036394	pop7	100	80.000	Danio_rerio
ENSXMAG00000019746	pop7	83	72.308	ENSDNOG00000031207	POP7	58	72.308	Dasypus_novemcinctus
ENSXMAG00000019746	pop7	82	72.868	ENSDORG00000012512	Pop7	91	72.868	Dipodomys_ordii
ENSXMAG00000019746	pop7	74	45.536	FBgn0066304	Rpp20	65	45.536	Drosophila_melanogaster
ENSXMAG00000019746	pop7	81	71.094	ENSETEG00000007941	POP7	92	71.094	Echinops_telfairi
ENSXMAG00000019746	pop7	82	72.093	ENSEASG00005016994	POP7	91	72.093	Equus_asinus_asinus
ENSXMAG00000019746	pop7	82	72.093	ENSECAG00000010383	POP7	91	72.093	Equus_caballus
ENSXMAG00000019746	pop7	75	96.460	ENSELUG00000023947	pop7	88	96.460	Esox_lucius
ENSXMAG00000019746	pop7	82	72.093	ENSFCAG00000006849	POP7	91	72.093	Felis_catus
ENSXMAG00000019746	pop7	82	72.093	ENSFDAG00000018839	POP7	91	72.093	Fukomys_damarensis
ENSXMAG00000019746	pop7	100	95.364	ENSFHEG00000012595	pop7	100	95.364	Fundulus_heteroclitus
ENSXMAG00000019746	pop7	100	100.000	ENSGAFG00000017633	pop7	100	100.000	Gambusia_affinis
ENSXMAG00000019746	pop7	100	89.404	ENSGACG00000019931	pop7	100	89.404	Gasterosteus_aculeatus
ENSXMAG00000019746	pop7	82	72.093	ENSGGOG00000016492	POP7	91	72.093	Gorilla_gorilla
ENSXMAG00000019746	pop7	82	93.548	ENSHBUG00000011987	pop7	94	93.548	Haplochromis_burtoni
ENSXMAG00000019746	pop7	82	72.093	ENSHGLG00000018118	POP7	91	72.093	Heterocephalus_glaber_female
ENSXMAG00000019746	pop7	82	72.093	ENSHGLG00100007908	POP7	91	72.093	Heterocephalus_glaber_male
ENSXMAG00000019746	pop7	99	86.093	ENSHCOG00000010137	pop7	100	86.093	Hippocampus_comes
ENSXMAG00000019746	pop7	99	80.667	ENSIPUG00000000411	pop7	99	80.667	Ictalurus_punctatus
ENSXMAG00000019746	pop7	82	72.093	ENSSTOG00000030883	POP7	91	72.093	Ictidomys_tridecemlineatus
ENSXMAG00000019746	pop7	82	72.093	ENSJJAG00000003989	Pop7	91	72.093	Jaculus_jaculus
ENSXMAG00000019746	pop7	100	96.689	ENSKMAG00000010696	pop7	100	96.689	Kryptolebias_marmoratus
ENSXMAG00000019746	pop7	82	96.774	ENSLBEG00000003483	pop7	89	96.774	Labrus_bergylta
ENSXMAG00000019746	pop7	96	90.345	ENSLBEG00000008621	pop7	94	90.345	Labrus_bergylta
ENSXMAG00000019746	pop7	91	71.533	ENSLACG00000010203	POP7	96	71.533	Latimeria_chalumnae
ENSXMAG00000019746	pop7	99	77.333	ENSLOCG00000017553	pop7	97	79.730	Lepisosteus_oculatus
ENSXMAG00000019746	pop7	83	69.231	ENSLAFG00000030032	POP7	93	69.231	Loxodonta_africana
ENSXMAG00000019746	pop7	82	72.093	ENSMFAG00000027783	POP7	91	72.093	Macaca_fascicularis
ENSXMAG00000019746	pop7	82	72.093	ENSMMUG00000008581	POP7	91	72.093	Macaca_mulatta
ENSXMAG00000019746	pop7	82	72.093	ENSMNEG00000037495	POP7	91	72.093	Macaca_nemestrina
ENSXMAG00000019746	pop7	82	72.093	ENSMLEG00000027597	POP7	91	72.093	Mandrillus_leucophaeus
ENSXMAG00000019746	pop7	82	98.387	ENSMAMG00000007258	pop7	89	98.387	Mastacembelus_armatus
ENSXMAG00000019746	pop7	82	93.548	ENSMZEG00005005138	pop7	94	93.548	Maylandia_zebra
ENSXMAG00000019746	pop7	95	85.811	ENSMZEG00005022194	-	100	85.811	Maylandia_zebra
ENSXMAG00000019746	pop7	82	72.868	ENSMAUG00000015820	Pop7	91	72.868	Mesocricetus_auratus
ENSXMAG00000019746	pop7	82	72.093	ENSMICG00000009398	POP7	91	72.093	Microcebus_murinus
ENSXMAG00000019746	pop7	82	72.093	ENSMOCG00000013694	Pop7	91	72.093	Microtus_ochrogaster
ENSXMAG00000019746	pop7	89	92.593	ENSMMOG00000014095	pop7	98	92.593	Mola_mola
ENSXMAG00000019746	pop7	82	71.756	ENSMODG00000023662	POP7	91	72.519	Monodelphis_domestica
ENSXMAG00000019746	pop7	81	97.561	ENSMALG00000011180	pop7	95	97.561	Monopterus_albus
ENSXMAG00000019746	pop7	82	72.093	MGP_CAROLIEiJ_G0027876	Pop7	91	72.093	Mus_caroli
ENSXMAG00000019746	pop7	82	72.093	ENSMUSG00000029715	Pop7	91	72.093	Mus_musculus
ENSXMAG00000019746	pop7	82	72.093	MGP_PahariEiJ_G0024462	Pop7	91	72.093	Mus_pahari
ENSXMAG00000019746	pop7	82	72.093	MGP_SPRETEiJ_G0028881	Pop7	91	72.093	Mus_spretus
ENSXMAG00000019746	pop7	82	72.868	ENSMPUG00000019765	POP7	91	72.868	Mustela_putorius_furo
ENSXMAG00000019746	pop7	82	72.868	ENSMLUG00000010110	POP7	91	72.868	Myotis_lucifugus
ENSXMAG00000019746	pop7	82	71.318	ENSNGAG00000021630	Pop7	91	71.318	Nannospalax_galili
ENSXMAG00000019746	pop7	83	96.000	ENSNBRG00000006286	pop7	91	96.000	Neolamprologus_brichardi
ENSXMAG00000019746	pop7	82	72.093	ENSNLEG00000011939	POP7	91	72.093	Nomascus_leucogenys
ENSXMAG00000019746	pop7	50	74.667	ENSOPRG00000015185	POP7	97	74.667	Ochotona_princeps
ENSXMAG00000019746	pop7	82	72.868	ENSODEG00000020363	POP7	91	72.868	Octodon_degus
ENSXMAG00000019746	pop7	82	72.581	ENSOANG00000001658	POP7	91	72.581	Ornithorhynchus_anatinus
ENSXMAG00000019746	pop7	82	72.868	ENSOCUG00000007818	POP7	91	72.868	Oryctolagus_cuniculus
ENSXMAG00000019746	pop7	81	96.721	ENSORLG00000003594	pop7	88	96.721	Oryzias_latipes
ENSXMAG00000019746	pop7	99	89.333	ENSORLG00020017530	pop7	91	89.333	Oryzias_latipes_hni
ENSXMAG00000019746	pop7	85	95.349	ENSORLG00015015310	pop7	94	95.349	Oryzias_latipes_hsok
ENSXMAG00000019746	pop7	100	86.093	ENSOMEG00000003667	pop7	100	86.093	Oryzias_melastigma
ENSXMAG00000019746	pop7	82	71.318	ENSOGAG00000009340	POP7	91	71.318	Otolemur_garnettii
ENSXMAG00000019746	pop7	82	72.093	ENSPPAG00000015339	POP7	91	72.093	Pan_paniscus
ENSXMAG00000019746	pop7	82	72.093	ENSPPRG00000018408	POP7	91	72.093	Panthera_pardus
ENSXMAG00000019746	pop7	82	72.093	ENSPTIG00000005807	POP7	91	72.093	Panthera_tigris_altaica
ENSXMAG00000019746	pop7	82	72.093	ENSPTRG00000047460	-	91	72.093	Pan_troglodytes
ENSXMAG00000019746	pop7	82	72.093	ENSPTRG00000019504	POP7	91	72.093	Pan_troglodytes
ENSXMAG00000019746	pop7	82	72.093	ENSPANG00000006196	POP7	91	72.093	Papio_anubis
ENSXMAG00000019746	pop7	99	73.510	ENSPKIG00000019869	pop7	85	78.082	Paramormyrops_kingsleyae
ENSXMAG00000019746	pop7	68	69.903	ENSPSIG00000000415	POP7	92	69.748	Pelodiscus_sinensis
ENSXMAG00000019746	pop7	81	96.748	ENSPMGG00000011142	pop7	89	96.748	Periophthalmus_magnuspinnatus
ENSXMAG00000019746	pop7	82	72.093	ENSPEMG00000011583	Pop7	91	72.093	Peromyscus_maniculatus_bairdii
ENSXMAG00000019746	pop7	83	73.485	ENSPCIG00000000517	POP7	66	73.485	Phascolarctos_cinereus
ENSXMAG00000019746	pop7	100	100.000	ENSPFOG00000019976	pop7	100	100.000	Poecilia_formosa
ENSXMAG00000019746	pop7	100	100.000	ENSPLAG00000007700	pop7	100	100.000	Poecilia_latipinna
ENSXMAG00000019746	pop7	100	100.000	ENSPMEG00000010673	pop7	100	100.000	Poecilia_mexicana
ENSXMAG00000019746	pop7	100	100.000	ENSPREG00000015137	pop7	100	100.000	Poecilia_reticulata
ENSXMAG00000019746	pop7	82	72.093	ENSPPYG00000017426	POP7	91	72.093	Pongo_abelii
ENSXMAG00000019746	pop7	83	71.538	ENSPCAG00000010445	POP7	91	71.538	Procavia_capensis
ENSXMAG00000019746	pop7	82	72.093	ENSPCOG00000009302	POP7	91	72.093	Propithecus_coquereli
ENSXMAG00000019746	pop7	77	65.000	ENSPCOG00000018009	-	88	65.000	Propithecus_coquereli
ENSXMAG00000019746	pop7	82	93.548	ENSPNYG00000000975	pop7	94	93.548	Pundamilia_nyererei
ENSXMAG00000019746	pop7	87	87.121	ENSPNAG00000007206	pop7	94	87.121	Pygocentrus_nattereri
ENSXMAG00000019746	pop7	82	72.093	ENSRNOG00000025310	Pop7	91	72.093	Rattus_norvegicus
ENSXMAG00000019746	pop7	82	72.093	ENSRBIG00000002671	POP7	91	72.093	Rhinopithecus_bieti
ENSXMAG00000019746	pop7	82	72.093	ENSRROG00000028543	POP7	91	72.093	Rhinopithecus_roxellana
ENSXMAG00000019746	pop7	82	72.868	ENSSBOG00000005173	POP7	91	72.868	Saimiri_boliviensis_boliviensis
ENSXMAG00000019746	pop7	82	72.519	ENSSHAG00000001026	POP7	91	72.519	Sarcophilus_harrisii
ENSXMAG00000019746	pop7	88	82.963	ENSSFOG00015007957	pop7	92	82.963	Scleropages_formosus
ENSXMAG00000019746	pop7	81	97.561	ENSSMAG00000015536	pop7	91	97.561	Scophthalmus_maximus
ENSXMAG00000019746	pop7	89	94.074	ENSSDUG00000022172	pop7	92	94.074	Seriola_dumerili
ENSXMAG00000019746	pop7	100	76.821	ENSSLDG00000019818	pop7	100	76.821	Seriola_lalandi_dorsalis
ENSXMAG00000019746	pop7	99	90.000	ENSSPAG00000000652	pop7	93	90.000	Stegastes_partitus
ENSXMAG00000019746	pop7	82	72.093	ENSSSCG00000007672	POP7	91	72.093	Sus_scrofa
ENSXMAG00000019746	pop7	100	86.755	ENSTRUG00000023845	pop7	100	86.755	Takifugu_rubripes
ENSXMAG00000019746	pop7	91	88.321	ENSTRUG00000024340	-	100	88.321	Takifugu_rubripes
ENSXMAG00000019746	pop7	100	89.404	ENSTNIG00000001259	pop7	100	89.404	Tetraodon_nigroviridis
ENSXMAG00000019746	pop7	82	72.093	ENSTBEG00000001849	POP7	91	72.093	Tupaia_belangeri
ENSXMAG00000019746	pop7	82	71.318	ENSTTRG00000011012	POP7	91	71.318	Tursiops_truncatus
ENSXMAG00000019746	pop7	82	72.093	ENSUAMG00000028076	POP7	91	72.093	Ursus_americanus
ENSXMAG00000019746	pop7	82	72.093	ENSUMAG00000010895	POP7	91	72.093	Ursus_maritimus
ENSXMAG00000019746	pop7	82	72.093	ENSVVUG00000023472	POP7	91	72.093	Vulpes_vulpes
ENSXMAG00000019746	pop7	95	100.000	ENSXCOG00000012016	pop7	94	100.000	Xiphophorus_couchianus