EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000019971 (Gene tree)
Gene ID: 102234883
Gene Symbol: sf3b5
Alias: Splicing factor 3B subunit 10|si:ch211-8a9.5|zgc:92874
Full Name: splicing factor 3b subunit 5
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 261 bases
Position: chr22:19779530-19779790
Accession: 102234883
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000020018	SF3b10	PF07189.11	8.2e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000020046	-	261	XM_005804170	ENSXMAP00000020018	86 (aa)	XP_005804227	M4AZX3

Gene Model

Click here to download ENSXMAG00000019971's gene model file

Pathways

Pathway ID	Pathway Name	Source
xma03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000019971's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000019971	sf3b5	99	92.941	ENSG00000169976	SF3B5	99	92.941	Homo_sapiens
ENSXMAG00000019971	sf3b5	100	98.837	ENSAPOG00000001721	sf3b5	100	98.837	Acanthochromis_polyacanthus
ENSXMAG00000019971	sf3b5	100	98.837	ENSACIG00000008106	sf3b5	100	98.837	Amphilophus_citrinellus
ENSXMAG00000019971	sf3b5	100	98.837	ENSAOCG00000023367	sf3b5	100	98.837	Amphiprion_ocellaris
ENSXMAG00000019971	sf3b5	100	98.837	ENSAPEG00000004605	sf3b5	100	98.837	Amphiprion_percula
ENSXMAG00000019971	sf3b5	100	100.000	ENSATEG00000009720	sf3b5	100	100.000	Anabas_testudineus
ENSXMAG00000019971	sf3b5	100	91.860	ENSACAG00000007948	SF3B5	100	91.860	Anolis_carolinensis
ENSXMAG00000019971	sf3b5	99	92.941	ENSANAG00000019999	SF3B5	99	92.941	Aotus_nancymaae
ENSXMAG00000019971	sf3b5	100	98.837	ENSACLG00000022410	sf3b5	100	98.837	Astatotilapia_calliptera
ENSXMAG00000019971	sf3b5	99	92.941	ENSBTAG00000009795	SF3B5	99	92.941	Bos_taurus
ENSXMAG00000019971	sf3b5	99	92.941	ENSCJAG00000046566	SF3B5	99	92.941	Callithrix_jacchus
ENSXMAG00000019971	sf3b5	99	92.941	ENSCAFG00000032495	SF3B5	99	92.941	Canis_familiaris
ENSXMAG00000019971	sf3b5	99	92.941	ENSCAFG00020000873	SF3B5	99	92.941	Canis_lupus_dingo
ENSXMAG00000019971	sf3b5	99	92.941	ENSCHIG00000007987	SF3B5	99	92.941	Capra_hircus
ENSXMAG00000019971	sf3b5	99	92.941	ENSTSYG00000012236	SF3B5	99	92.941	Carlito_syrichta
ENSXMAG00000019971	sf3b5	99	92.941	ENSCPOG00000012435	SF3B5	99	92.941	Cavia_porcellus
ENSXMAG00000019971	sf3b5	99	92.941	ENSCCAG00000006528	SF3B5	99	92.941	Cebus_capucinus
ENSXMAG00000019971	sf3b5	99	92.941	ENSCATG00000010192	SF3B5	99	92.941	Cercocebus_atys
ENSXMAG00000019971	sf3b5	99	92.941	ENSCLAG00000017802	SF3B5	99	92.941	Chinchilla_lanigera
ENSXMAG00000019971	sf3b5	99	92.941	ENSCSAG00000000187	SF3B5	99	92.941	Chlorocebus_sabaeus
ENSXMAG00000019971	sf3b5	100	91.860	ENSCPBG00000017148	SF3B5	100	91.860	Chrysemys_picta_bellii
ENSXMAG00000019971	sf3b5	98	72.619	ENSCING00000021953	-	98	72.619	Ciona_intestinalis
ENSXMAG00000019971	sf3b5	99	92.941	ENSCANG00000002639	SF3B5	99	92.941	Colobus_angolensis_palliatus
ENSXMAG00000019971	sf3b5	99	91.765	ENSCGRG00001007249	Sf3b5	99	91.765	Cricetulus_griseus_chok1gshd
ENSXMAG00000019971	sf3b5	99	91.765	ENSCGRG00000019185	Sf3b5	99	91.765	Cricetulus_griseus_crigri
ENSXMAG00000019971	sf3b5	100	98.837	ENSCSEG00000003216	sf3b5	100	98.837	Cynoglossus_semilaevis
ENSXMAG00000019971	sf3b5	100	100.000	ENSCVAG00000005040	sf3b5	100	100.000	Cyprinodon_variegatus
ENSXMAG00000019971	sf3b5	100	95.349	ENSDARG00000016855	sf3b5	100	95.349	Danio_rerio
ENSXMAG00000019971	sf3b5	99	92.941	ENSDNOG00000048829	SF3B5	81	92.941	Dasypus_novemcinctus
ENSXMAG00000019971	sf3b5	99	92.941	ENSDORG00000005838	Sf3b5	99	92.941	Dipodomys_ordii
ENSXMAG00000019971	sf3b5	99	81.176	FBgn0040534	Sf3b5	100	81.176	Drosophila_melanogaster
ENSXMAG00000019971	sf3b5	99	92.941	ENSETEG00000004047	SF3B5	99	92.941	Echinops_telfairi
ENSXMAG00000019971	sf3b5	99	82.353	ENSEBUG00000002311	sf3b5	100	82.353	Eptatretus_burgeri
ENSXMAG00000019971	sf3b5	99	92.941	ENSEASG00005009522	SF3B5	99	92.941	Equus_asinus_asinus
ENSXMAG00000019971	sf3b5	99	92.941	ENSECAG00000005457	SF3B5	99	92.941	Equus_caballus
ENSXMAG00000019971	sf3b5	100	98.837	ENSELUG00000014290	SF3B5	100	98.837	Esox_lucius
ENSXMAG00000019971	sf3b5	99	92.941	ENSFCAG00000000936	SF3B5	99	92.941	Felis_catus
ENSXMAG00000019971	sf3b5	100	90.698	ENSFALG00000015012	SF3B5	100	90.698	Ficedula_albicollis
ENSXMAG00000019971	sf3b5	99	92.941	ENSFDAG00000003664	SF3B5	99	92.941	Fukomys_damarensis
ENSXMAG00000019971	sf3b5	100	100.000	ENSFHEG00000020301	sf3b5	100	100.000	Fundulus_heteroclitus
ENSXMAG00000019971	sf3b5	100	97.674	ENSGMOG00000019972	sf3b5	100	97.674	Gadus_morhua
ENSXMAG00000019971	sf3b5	100	93.023	ENSGALG00000030824	SF3B5	100	93.023	Gallus_gallus
ENSXMAG00000019971	sf3b5	100	100.000	ENSGAFG00000000271	sf3b5	100	100.000	Gambusia_affinis
ENSXMAG00000019971	sf3b5	100	100.000	ENSGACG00000010363	sf3b5	100	100.000	Gasterosteus_aculeatus
ENSXMAG00000019971	sf3b5	100	91.860	ENSGAGG00000011434	SF3B5	100	91.860	Gopherus_agassizii
ENSXMAG00000019971	sf3b5	100	87.209	ENSGAGG00000000646	-	100	87.209	Gopherus_agassizii
ENSXMAG00000019971	sf3b5	99	92.941	ENSGGOG00000001537	SF3B5	99	92.941	Gorilla_gorilla
ENSXMAG00000019971	sf3b5	100	98.837	ENSHBUG00000008925	sf3b5	100	98.837	Haplochromis_burtoni
ENSXMAG00000019971	sf3b5	99	92.941	ENSHGLG00000021406	SF3B5	99	92.941	Heterocephalus_glaber_female
ENSXMAG00000019971	sf3b5	99	92.941	ENSHGLG00100020370	SF3B5	99	92.941	Heterocephalus_glaber_male
ENSXMAG00000019971	sf3b5	100	98.837	ENSHCOG00000016802	sf3b5	100	98.837	Hippocampus_comes
ENSXMAG00000019971	sf3b5	100	98.837	ENSHCOG00000016806	sf3b5	100	98.837	Hippocampus_comes
ENSXMAG00000019971	sf3b5	100	98.837	ENSHCOG00000009115	-	100	98.837	Hippocampus_comes
ENSXMAG00000019971	sf3b5	100	97.674	ENSIPUG00000015166	sf3b5	100	97.674	Ictalurus_punctatus
ENSXMAG00000019971	sf3b5	99	92.941	ENSSTOG00000003347	SF3B5	99	92.941	Ictidomys_tridecemlineatus
ENSXMAG00000019971	sf3b5	99	92.941	ENSJJAG00000001857	Sf3b5	99	92.941	Jaculus_jaculus
ENSXMAG00000019971	sf3b5	100	100.000	ENSKMAG00000002249	sf3b5	100	100.000	Kryptolebias_marmoratus
ENSXMAG00000019971	sf3b5	100	100.000	ENSLBEG00000019847	sf3b5	100	100.000	Labrus_bergylta
ENSXMAG00000019971	sf3b5	100	91.860	ENSLACG00000000946	SF3B5	100	91.860	Latimeria_chalumnae
ENSXMAG00000019971	sf3b5	100	98.837	ENSLOCG00000017352	sf3b5	100	98.837	Lepisosteus_oculatus
ENSXMAG00000019971	sf3b5	99	92.941	ENSLAFG00000032489	SF3B5	99	92.941	Loxodonta_africana
ENSXMAG00000019971	sf3b5	99	92.941	ENSMFAG00000029753	SF3B5	99	92.941	Macaca_fascicularis
ENSXMAG00000019971	sf3b5	99	92.941	ENSMMUG00000047691	SF3B5	99	92.941	Macaca_mulatta
ENSXMAG00000019971	sf3b5	99	92.941	ENSMNEG00000028236	SF3B5	99	92.941	Macaca_nemestrina
ENSXMAG00000019971	sf3b5	99	92.941	ENSMLEG00000007622	SF3B5	99	92.941	Mandrillus_leucophaeus
ENSXMAG00000019971	sf3b5	100	98.837	ENSMAMG00000021639	sf3b5	100	98.837	Mastacembelus_armatus
ENSXMAG00000019971	sf3b5	100	87.209	ENSMZEG00005027407	sf3b5	100	87.209	Maylandia_zebra
ENSXMAG00000019971	sf3b5	100	98.837	ENSMZEG00005027408	sf3b5	100	98.837	Maylandia_zebra
ENSXMAG00000019971	sf3b5	100	98.837	ENSMZEG00005028115	SF3B5	100	98.837	Maylandia_zebra
ENSXMAG00000019971	sf3b5	100	93.023	ENSMGAG00000015849	SF3B5	100	93.023	Meleagris_gallopavo
ENSXMAG00000019971	sf3b5	99	91.765	ENSMAUG00000008283	Sf3b5	99	91.765	Mesocricetus_auratus
ENSXMAG00000019971	sf3b5	99	92.941	ENSMICG00000014922	SF3B5	99	92.941	Microcebus_murinus
ENSXMAG00000019971	sf3b5	99	91.765	ENSMOCG00000001713	Sf3b5	99	91.765	Microtus_ochrogaster
ENSXMAG00000019971	sf3b5	100	98.837	ENSMMOG00000007956	sf3b5	100	98.837	Mola_mola
ENSXMAG00000019971	sf3b5	99	92.941	ENSMODG00000023291	SF3B5	83	92.941	Monodelphis_domestica
ENSXMAG00000019971	sf3b5	91	96.296	ENSMALG00000020357	sf3b5	99	96.296	Monopterus_albus
ENSXMAG00000019971	sf3b5	99	91.765	MGP_CAROLIEiJ_G0015120	Sf3b5	99	91.765	Mus_caroli
ENSXMAG00000019971	sf3b5	99	91.765	ENSMUSG00000078348	Sf3b5	99	91.765	Mus_musculus
ENSXMAG00000019971	sf3b5	99	91.765	MGP_PahariEiJ_G0023739	Sf3b5	99	91.765	Mus_pahari
ENSXMAG00000019971	sf3b5	99	91.765	MGP_SPRETEiJ_G0015928	Sf3b5	99	91.765	Mus_spretus
ENSXMAG00000019971	sf3b5	99	92.941	ENSMPUG00000018379	SF3B5	99	92.941	Mustela_putorius_furo
ENSXMAG00000019971	sf3b5	93	93.750	ENSMLUG00000025546	-	93	93.750	Myotis_lucifugus
ENSXMAG00000019971	sf3b5	99	90.588	ENSMLUG00000010802	-	99	90.588	Myotis_lucifugus
ENSXMAG00000019971	sf3b5	99	92.941	ENSMLUG00000028504	-	99	92.941	Myotis_lucifugus
ENSXMAG00000019971	sf3b5	99	92.941	ENSNGAG00000010732	Sf3b5	99	92.941	Nannospalax_galili
ENSXMAG00000019971	sf3b5	100	98.837	ENSNBRG00000014383	sf3b5	100	98.837	Neolamprologus_brichardi
ENSXMAG00000019971	sf3b5	99	92.941	ENSNLEG00000019307	SF3B5	99	92.941	Nomascus_leucogenys
ENSXMAG00000019971	sf3b5	99	92.941	ENSMEUG00000005445	-	99	92.941	Notamacropus_eugenii
ENSXMAG00000019971	sf3b5	99	92.941	ENSMEUG00000005440	-	99	92.941	Notamacropus_eugenii
ENSXMAG00000019971	sf3b5	99	94.118	ENSOPRG00000015107	SF3B5	99	94.118	Ochotona_princeps
ENSXMAG00000019971	sf3b5	99	92.941	ENSODEG00000019507	SF3B5	99	92.941	Octodon_degus
ENSXMAG00000019971	sf3b5	100	98.837	ENSONIG00000020725	sf3b5	100	98.837	Oreochromis_niloticus
ENSXMAG00000019971	sf3b5	67	93.103	ENSOANG00000015301	SF3B5	95	93.103	Ornithorhynchus_anatinus
ENSXMAG00000019971	sf3b5	99	92.941	ENSOCUG00000008752	SF3B5	99	92.941	Oryctolagus_cuniculus
ENSXMAG00000019971	sf3b5	100	97.674	ENSORLG00000004925	sf3b5	100	97.674	Oryzias_latipes
ENSXMAG00000019971	sf3b5	100	97.674	ENSORLG00020011625	sf3b5	100	97.674	Oryzias_latipes_hni
ENSXMAG00000019971	sf3b5	100	97.674	ENSORLG00015017061	sf3b5	100	97.674	Oryzias_latipes_hsok
ENSXMAG00000019971	sf3b5	100	97.674	ENSOMEG00000010620	sf3b5	100	97.674	Oryzias_melastigma
ENSXMAG00000019971	sf3b5	99	92.941	ENSOGAG00000012152	SF3B5	99	92.941	Otolemur_garnettii
ENSXMAG00000019971	sf3b5	99	89.412	ENSOARG00000002617	SF3B5	99	89.412	Ovis_aries
ENSXMAG00000019971	sf3b5	92	93.671	ENSOARG00000019486	-	95	93.671	Ovis_aries
ENSXMAG00000019971	sf3b5	99	92.941	ENSPPAG00000012940	SF3B5	99	92.941	Pan_paniscus
ENSXMAG00000019971	sf3b5	99	92.941	ENSPPRG00000021262	SF3B5	99	92.941	Panthera_pardus
ENSXMAG00000019971	sf3b5	99	92.941	ENSPTIG00000001952	SF3B5	99	92.941	Panthera_tigris_altaica
ENSXMAG00000019971	sf3b5	99	92.941	ENSPTRG00000018676	SF3B5	99	92.941	Pan_troglodytes
ENSXMAG00000019971	sf3b5	99	92.941	ENSPANG00000034242	SF3B5	99	92.941	Papio_anubis
ENSXMAG00000019971	sf3b5	100	96.512	ENSPKIG00000006057	sf3b5	100	96.512	Paramormyrops_kingsleyae
ENSXMAG00000019971	sf3b5	100	91.860	ENSPSIG00000001262	SF3B5	100	91.860	Pelodiscus_sinensis
ENSXMAG00000019971	sf3b5	100	98.837	ENSPMGG00000014804	sf3b5	100	98.837	Periophthalmus_magnuspinnatus
ENSXMAG00000019971	sf3b5	99	91.765	ENSPEMG00000012931	Sf3b5	99	91.765	Peromyscus_maniculatus_bairdii
ENSXMAG00000019971	sf3b5	100	88.372	ENSPMAG00000010296	sf3b5	100	88.372	Petromyzon_marinus
ENSXMAG00000019971	sf3b5	93	95.000	ENSPCIG00000011344	-	78	95.000	Phascolarctos_cinereus
ENSXMAG00000019971	sf3b5	99	71.765	ENSPCIG00000025007	-	99	71.765	Phascolarctos_cinereus
ENSXMAG00000019971	sf3b5	100	100.000	ENSPFOG00000019994	sf3b5	100	100.000	Poecilia_formosa
ENSXMAG00000019971	sf3b5	100	100.000	ENSPLAG00000008412	sf3b5	100	100.000	Poecilia_latipinna
ENSXMAG00000019971	sf3b5	100	100.000	ENSPMEG00000020050	sf3b5	100	100.000	Poecilia_mexicana
ENSXMAG00000019971	sf3b5	100	100.000	ENSPREG00000009242	sf3b5	100	100.000	Poecilia_reticulata
ENSXMAG00000019971	sf3b5	99	92.941	ENSPPYG00000017068	SF3B5	99	92.941	Pongo_abelii
ENSXMAG00000019971	sf3b5	99	92.941	ENSPCAG00000009332	SF3B5	99	92.941	Procavia_capensis
ENSXMAG00000019971	sf3b5	99	92.941	ENSPCOG00000013754	SF3B5	99	92.941	Propithecus_coquereli
ENSXMAG00000019971	sf3b5	56	95.833	ENSPVAG00000002820	SF3B5	100	95.833	Pteropus_vampyrus
ENSXMAG00000019971	sf3b5	100	98.837	ENSPNYG00000002075	sf3b5	100	98.837	Pundamilia_nyererei
ENSXMAG00000019971	sf3b5	100	96.512	ENSPNAG00000004942	sf3b5	100	96.512	Pygocentrus_nattereri
ENSXMAG00000019971	sf3b5	99	91.765	ENSRNOG00000014908	Sf3b5	99	91.765	Rattus_norvegicus
ENSXMAG00000019971	sf3b5	99	92.941	ENSRBIG00000006301	SF3B5	99	92.941	Rhinopithecus_bieti
ENSXMAG00000019971	sf3b5	99	92.941	ENSRROG00000037067	SF3B5	99	92.941	Rhinopithecus_roxellana
ENSXMAG00000019971	sf3b5	99	92.941	ENSSBOG00000006122	SF3B5	99	92.941	Saimiri_boliviensis_boliviensis
ENSXMAG00000019971	sf3b5	99	91.765	ENSSHAG00000015670	SF3B5	99	91.765	Sarcophilus_harrisii
ENSXMAG00000019971	sf3b5	100	95.349	ENSSFOG00015015767	sf3b5	100	95.349	Scleropages_formosus
ENSXMAG00000019971	sf3b5	100	98.837	ENSSMAG00000018852	sf3b5	100	98.837	Scophthalmus_maximus
ENSXMAG00000019971	sf3b5	100	100.000	ENSSDUG00000018161	sf3b5	100	100.000	Seriola_dumerili
ENSXMAG00000019971	sf3b5	100	100.000	ENSSLDG00000014547	sf3b5	100	100.000	Seriola_lalandi_dorsalis
ENSXMAG00000019971	sf3b5	99	92.941	ENSSARG00000007820	SF3B5	99	92.941	Sorex_araneus
ENSXMAG00000019971	sf3b5	100	98.837	ENSSPAG00000009244	sf3b5	100	98.837	Stegastes_partitus
ENSXMAG00000019971	sf3b5	100	98.837	ENSSPAG00000017371	-	100	98.837	Stegastes_partitus
ENSXMAG00000019971	sf3b5	99	92.941	ENSSSCG00000035578	SF3B5	99	92.941	Sus_scrofa
ENSXMAG00000019971	sf3b5	100	93.023	ENSTGUG00000010810	SF3B5	100	93.023	Taeniopygia_guttata
ENSXMAG00000019971	sf3b5	100	97.674	ENSTRUG00000005577	sf3b5	100	97.674	Takifugu_rubripes
ENSXMAG00000019971	sf3b5	100	97.674	ENSTNIG00000001265	sf3b5	100	97.674	Tetraodon_nigroviridis
ENSXMAG00000019971	sf3b5	99	94.118	ENSTBEG00000003072	SF3B5	99	94.118	Tupaia_belangeri
ENSXMAG00000019971	sf3b5	99	92.941	ENSTTRG00000008817	SF3B5	99	92.941	Tursiops_truncatus
ENSXMAG00000019971	sf3b5	99	92.941	ENSUAMG00000027296	SF3B5	99	92.941	Ursus_americanus
ENSXMAG00000019971	sf3b5	99	92.941	ENSUMAG00000005448	SF3B5	99	92.941	Ursus_maritimus
ENSXMAG00000019971	sf3b5	99	92.941	ENSVPAG00000003826	SF3B5	99	92.941	Vicugna_pacos
ENSXMAG00000019971	sf3b5	99	92.941	ENSVVUG00000004703	SF3B5	99	92.941	Vulpes_vulpes
ENSXMAG00000019971	sf3b5	100	95.349	ENSXETG00000021409	sf3b5	100	95.349	Xenopus_tropicalis