EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000020042 (Gene tree)
Gene ID: 111609634
Gene Symbol: -
Alias: -
Full Name: oocyte zinc finger protein XlCOF6.1-like
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 1209 bases
Position: chr9:30168520-30169728
Accession: 111609634
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000020089	zf-C2H2	PF00096.26	2.3e-46	1	8
ENSXMAP00000020089	zf-C2H2	PF00096.26	2.3e-46	2	8
ENSXMAP00000020089	zf-C2H2	PF00096.26	2.3e-46	3	8
ENSXMAP00000020089	zf-C2H2	PF00096.26	2.3e-46	4	8
ENSXMAP00000020089	zf-C2H2	PF00096.26	2.3e-46	5	8
ENSXMAP00000020089	zf-C2H2	PF00096.26	2.3e-46	6	8
ENSXMAP00000020089	zf-C2H2	PF00096.26	2.3e-46	7	8
ENSXMAP00000020089	zf-C2H2	PF00096.26	2.3e-46	8	8
ENSXMAP00000020089	zf-met	PF12874.7	3.1e-14	1	2
ENSXMAP00000020089	zf-met	PF12874.7	3.1e-14	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000020117	-	1209	XM_023339023	ENSXMAP00000020089	402 (aa)	XP_023194791	M4B044

Gene Model

Click here to download ENSXMAG00000020042's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000020042's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000020042	-	76	44.215	ENSACAG00000026916	-	86	44.215	Anolis_carolinensis
ENSXMAG00000020042	-	67	47.638	ENSACAG00000026906	-	99	47.638	Anolis_carolinensis
ENSXMAG00000020042	-	66	49.012	ENSACAG00000027001	-	97	49.012	Anolis_carolinensis
ENSXMAG00000020042	-	69	46.457	ENSAMXG00000014745	-	82	46.457	Astyanax_mexicanus
ENSXMAG00000020042	-	65	55.294	ENSAMXG00000038122	-	100	55.294	Astyanax_mexicanus
ENSXMAG00000020042	-	65	48.913	ENSELUG00000000485	-	86	48.913	Esox_lucius
ENSXMAG00000020042	-	68	39.860	ENSELUG00000018970	-	82	39.860	Esox_lucius
ENSXMAG00000020042	-	97	45.614	ENSELUG00000021525	-	87	45.614	Esox_lucius
ENSXMAG00000020042	-	67	40.927	ENSELUG00000013806	-	64	40.927	Esox_lucius
ENSXMAG00000020042	-	68	37.729	ENSELUG00000011838	-	66	36.735	Esox_lucius
ENSXMAG00000020042	-	66	40.000	ENSGACG00000001523	-	99	40.000	Gasterosteus_aculeatus
ENSXMAG00000020042	-	82	34.146	ENSHBUG00000016384	-	92	34.146	Haplochromis_burtoni
ENSXMAG00000020042	-	65	46.983	ENSHCOG00000017456	-	88	46.983	Hippocampus_comes
ENSXMAG00000020042	-	96	46.781	ENSHCOG00000001629	-	92	46.781	Hippocampus_comes
ENSXMAG00000020042	-	89	34.605	ENSLBEG00000013235	-	95	36.683	Labrus_bergylta
ENSXMAG00000020042	-	69	45.370	ENSMGAG00000016603	-	100	45.370	Meleagris_gallopavo
ENSXMAG00000020042	-	67	45.982	ENSPNAG00000009184	-	90	45.982	Pygocentrus_nattereri
ENSXMAG00000020042	-	69	46.215	ENSPNAG00000009176	-	87	46.215	Pygocentrus_nattereri
ENSXMAG00000020042	-	82	39.738	ENSSFOG00015020993	-	78	43.262	Scleropages_formosus
ENSXMAG00000020042	-	63	36.820	ENSTNIG00000000528	-	95	36.820	Tetraodon_nigroviridis
ENSXMAG00000020042	-	68	40.343	ENSTNIG00000002343	-	85	40.343	Tetraodon_nigroviridis