EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000020079 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 4741 bases
Position: chrPGSD01000039.1:93585-98325
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000020126	RIO1	PF01163.22	0.00027	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000020154	-	609	-	ENSXMAP00000020126	202 (aa)	-	M4B081

Gene Model

Click here to download ENSXMAG00000020079's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000020079's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000020079	-	81	61.963	ENSG00000172315	TP53RK	63	61.963	Homo_sapiens
ENSXMAG00000020079	-	81	77.301	ENSAPOG00000007130	tp53rk	71	77.301	Acanthochromis_polyacanthus
ENSXMAG00000020079	-	81	63.190	ENSAMEG00000000007	TP53RK	94	63.190	Ailuropoda_melanoleuca
ENSXMAG00000020079	-	81	79.755	ENSACIG00000000770	tp53rk	71	79.755	Amphilophus_citrinellus
ENSXMAG00000020079	-	81	78.528	ENSAOCG00000009426	tp53rk	71	78.528	Amphiprion_ocellaris
ENSXMAG00000020079	-	81	77.914	ENSAPEG00000017566	tp53rk	71	77.914	Amphiprion_percula
ENSXMAG00000020079	-	81	75.460	ENSATEG00000003109	tp53rk	71	75.460	Anabas_testudineus
ENSXMAG00000020079	-	88	63.483	ENSACAG00000016698	TP53RK	71	63.483	Anolis_carolinensis
ENSXMAG00000020079	-	81	61.350	ENSANAG00000021017	TP53RK	63	61.350	Aotus_nancymaae
ENSXMAG00000020079	-	75	75.497	ENSACLG00000026597	tp53rk	67	75.497	Astatotilapia_calliptera
ENSXMAG00000020079	-	81	67.485	ENSAMXG00000040578	tp53rk	68	67.485	Astyanax_mexicanus
ENSXMAG00000020079	-	81	61.963	ENSBTAG00000027326	TP53RK	63	61.963	Bos_taurus
ENSXMAG00000020079	-	80	43.902	WBGene00138717	F52C12.6	64	43.902	Caenorhabditis_elegans
ENSXMAG00000020079	-	81	61.350	ENSCJAG00000039826	TP53RK	63	61.350	Callithrix_jacchus
ENSXMAG00000020079	-	81	62.577	ENSCAFG00000029496	TP53RK	53	62.577	Canis_familiaris
ENSXMAG00000020079	-	81	62.577	ENSCAFG00020015159	TP53RK	63	62.577	Canis_lupus_dingo
ENSXMAG00000020079	-	81	61.350	ENSCHIG00000026217	-	63	61.350	Capra_hircus
ENSXMAG00000020079	-	81	60.736	ENSCHIG00000011635	-	63	60.736	Capra_hircus
ENSXMAG00000020079	-	80	61.728	ENSCPOG00000005477	TP53RK	65	61.728	Cavia_porcellus
ENSXMAG00000020079	-	81	62.577	ENSCCAG00000025781	TP53RK	63	62.577	Cebus_capucinus
ENSXMAG00000020079	-	81	59.509	ENSCATG00000042243	TP53RK	63	59.509	Cercocebus_atys
ENSXMAG00000020079	-	80	61.111	ENSCLAG00000015459	TP53RK	65	61.111	Chinchilla_lanigera
ENSXMAG00000020079	-	81	60.736	ENSCSAG00000014864	TP53RK	63	60.736	Chlorocebus_sabaeus
ENSXMAG00000020079	-	80	63.354	ENSCHOG00000005034	TP53RK	100	63.354	Choloepus_hoffmanni
ENSXMAG00000020079	-	81	69.091	ENSCPBG00000026757	TP53RK	67	69.091	Chrysemys_picta_bellii
ENSXMAG00000020079	-	99	45.366	ENSCSAVG00000003140	-	90	45.366	Ciona_savignyi
ENSXMAG00000020079	-	81	61.350	ENSCANG00000034367	-	63	61.350	Colobus_angolensis_palliatus
ENSXMAG00000020079	-	70	61.972	ENSCANG00000034667	-	60	61.972	Colobus_angolensis_palliatus
ENSXMAG00000020079	-	81	60.736	ENSCGRG00001017009	-	63	60.736	Cricetulus_griseus_chok1gshd
ENSXMAG00000020079	-	90	58.011	ENSCGRG00000008894	-	88	58.011	Cricetulus_griseus_crigri
ENSXMAG00000020079	-	81	73.006	ENSCSEG00000020246	tp53rk	71	73.006	Cynoglossus_semilaevis
ENSXMAG00000020079	-	81	68.098	ENSDARG00000112667	tp53rk	68	68.098	Danio_rerio
ENSXMAG00000020079	-	80	65.644	ENSDNOG00000003789	TP53RK	63	65.644	Dasypus_novemcinctus
ENSXMAG00000020079	-	81	42.262	FBgn0035590	Prpk	74	42.262	Drosophila_melanogaster
ENSXMAG00000020079	-	96	54.124	ENSETEG00000009174	TP53RK	74	54.124	Echinops_telfairi
ENSXMAG00000020079	-	81	47.895	ENSEBUG00000000968	tp53rk	69	47.895	Eptatretus_burgeri
ENSXMAG00000020079	-	81	60.736	ENSEASG00005023356	TP53RK	63	60.736	Equus_asinus_asinus
ENSXMAG00000020079	-	81	60.736	ENSECAG00000038590	TP53RK	63	60.736	Equus_caballus
ENSXMAG00000020079	-	81	60.123	ENSEEUG00000014466	TP53RK	63	60.123	Erinaceus_europaeus
ENSXMAG00000020079	-	81	64.024	ENSELUG00000013117	tp53rk	69	64.024	Esox_lucius
ENSXMAG00000020079	-	81	61.963	ENSFCAG00000040607	TP53RK	63	61.963	Felis_catus
ENSXMAG00000020079	-	80	67.284	ENSFALG00000005147	TP53RK	89	67.284	Ficedula_albicollis
ENSXMAG00000020079	-	80	59.877	ENSFDAG00000015505	TP53RK	79	59.877	Fukomys_damarensis
ENSXMAG00000020079	-	80	69.697	ENSGMOG00000017301	tp53rk	69	69.697	Gadus_morhua
ENSXMAG00000020079	-	81	96.319	ENSGAFG00000008308	tp53rk	71	96.319	Gambusia_affinis
ENSXMAG00000020079	-	81	74.847	ENSGACG00000011424	tp53rk	69	74.847	Gasterosteus_aculeatus
ENSXMAG00000020079	-	81	67.485	ENSGAGG00000024362	TP53RK	67	67.485	Gopherus_agassizii
ENSXMAG00000020079	-	81	61.963	ENSGGOG00000002063	TP53RK	63	61.963	Gorilla_gorilla
ENSXMAG00000020079	-	81	77.301	ENSHBUG00000003738	tp53rk	69	77.301	Haplochromis_burtoni
ENSXMAG00000020079	-	80	60.494	ENSHGLG00000004532	TP53RK	65	60.494	Heterocephalus_glaber_female
ENSXMAG00000020079	-	80	61.111	ENSHGLG00100001420	TP53RK	65	61.111	Heterocephalus_glaber_male
ENSXMAG00000020079	-	81	72.561	ENSHCOG00000015970	tp53rk	69	72.561	Hippocampus_comes
ENSXMAG00000020079	-	81	65.854	ENSIPUG00000002500	tp53rk	68	65.854	Ictalurus_punctatus
ENSXMAG00000020079	-	81	60.736	ENSSTOG00000023195	TP53RK	65	60.736	Ictidomys_tridecemlineatus
ENSXMAG00000020079	-	80	61.728	ENSJJAG00000017483	-	65	61.728	Jaculus_jaculus
ENSXMAG00000020079	-	81	73.620	ENSKMAG00000013771	tp53rk	71	73.620	Kryptolebias_marmoratus
ENSXMAG00000020079	-	81	71.166	ENSLACG00000009114	TP53RK	69	71.166	Latimeria_chalumnae
ENSXMAG00000020079	-	81	71.515	ENSLOCG00000002129	tp53rk	62	71.515	Lepisosteus_oculatus
ENSXMAG00000020079	-	81	61.963	ENSLAFG00000002452	TP53RK	65	61.963	Loxodonta_africana
ENSXMAG00000020079	-	81	60.736	ENSMFAG00000042174	TP53RK	63	60.736	Macaca_fascicularis
ENSXMAG00000020079	-	81	60.736	ENSMNEG00000035758	TP53RK	63	60.736	Macaca_nemestrina
ENSXMAG00000020079	-	81	60.736	ENSMLEG00000042123	TP53RK	63	60.736	Mandrillus_leucophaeus
ENSXMAG00000020079	-	75	70.395	ENSMAMG00000000432	tp53rk	62	70.395	Mastacembelus_armatus
ENSXMAG00000020079	-	81	77.301	ENSMZEG00005004953	tp53rk	69	77.301	Maylandia_zebra
ENSXMAG00000020079	-	81	61.350	ENSMAUG00000018147	-	65	61.350	Mesocricetus_auratus
ENSXMAG00000020079	-	81	61.963	ENSMICG00000030995	TP53RK	63	61.963	Microcebus_murinus
ENSXMAG00000020079	-	81	62.048	ENSMOCG00000020701	-	65	62.048	Microtus_ochrogaster
ENSXMAG00000020079	-	81	57.669	ENSMOCG00000004008	-	69	57.669	Microtus_ochrogaster
ENSXMAG00000020079	-	81	63.190	ENSMMOG00000009664	tp53rk	60	63.190	Mola_mola
ENSXMAG00000020079	-	81	76.074	ENSMALG00000016276	tp53rk	69	76.074	Monopterus_albus
ENSXMAG00000020079	-	81	61.446	MGP_CAROLIEiJ_G0024689	-	66	61.446	Mus_caroli
ENSXMAG00000020079	-	81	60.843	ENSMUSG00000039725	Trp53rka	66	60.843	Mus_musculus
ENSXMAG00000020079	-	81	62.048	ENSMUSG00000042854	Trp53rkb	66	62.048	Mus_musculus
ENSXMAG00000020079	-	81	62.651	MGP_PahariEiJ_G0026131	-	66	62.651	Mus_pahari
ENSXMAG00000020079	-	84	60.116	MGP_SPRETEiJ_G0025616	Trp53rkb	68	60.116	Mus_spretus
ENSXMAG00000020079	-	81	62.048	MGP_SPRETEiJ_G0025609	Trp53rka	66	62.048	Mus_spretus
ENSXMAG00000020079	-	81	62.577	ENSMLUG00000012340	TP53RK	62	62.577	Myotis_lucifugus
ENSXMAG00000020079	-	82	56.287	ENSNGAG00000015004	-	65	56.287	Nannospalax_galili
ENSXMAG00000020079	-	81	61.350	ENSNGAG00000017924	-	65	61.350	Nannospalax_galili
ENSXMAG00000020079	-	81	61.350	ENSNLEG00000029775	TP53RK	63	61.350	Nomascus_leucogenys
ENSXMAG00000020079	-	81	64.417	ENSMEUG00000002329	TP53RK	64	64.417	Notamacropus_eugenii
ENSXMAG00000020079	-	79	56.875	ENSOPRG00000002155	TP53RK	63	56.875	Ochotona_princeps
ENSXMAG00000020079	-	80	62.346	ENSODEG00000009596	TP53RK	65	62.346	Octodon_degus
ENSXMAG00000020079	-	81	77.914	ENSONIG00000003139	tp53rk	64	77.914	Oreochromis_niloticus
ENSXMAG00000020079	-	81	71.166	ENSORLG00000027986	tp53rk	71	71.166	Oryzias_latipes
ENSXMAG00000020079	-	81	71.166	ENSORLG00020001150	tp53rk	71	71.166	Oryzias_latipes_hni
ENSXMAG00000020079	-	81	69.939	ENSORLG00015022941	tp53rk	59	69.939	Oryzias_latipes_hsok
ENSXMAG00000020079	-	81	68.712	ENSOMEG00000015137	tp53rk	71	68.712	Oryzias_melastigma
ENSXMAG00000020079	-	81	61.350	ENSOGAG00000012689	TP53RK	63	61.350	Otolemur_garnettii
ENSXMAG00000020079	-	81	61.350	ENSOARG00000009156	TP53RK	63	61.350	Ovis_aries
ENSXMAG00000020079	-	81	61.963	ENSPPAG00000038588	TP53RK	63	61.963	Pan_paniscus
ENSXMAG00000020079	-	81	62.577	ENSPPRG00000010845	TP53RK	63	62.577	Panthera_pardus
ENSXMAG00000020079	-	80	62.733	ENSPTIG00000009801	TP53RK	68	62.733	Panthera_tigris_altaica
ENSXMAG00000020079	-	81	61.963	ENSPTRG00000051150	TP53RK	63	61.963	Pan_troglodytes
ENSXMAG00000020079	-	81	60.736	ENSPANG00000020822	TP53RK	63	60.736	Papio_anubis
ENSXMAG00000020079	-	81	72.393	ENSPKIG00000003915	tp53rk	69	72.393	Paramormyrops_kingsleyae
ENSXMAG00000020079	-	80	69.136	ENSPSIG00000012226	TP53RK	63	69.136	Pelodiscus_sinensis
ENSXMAG00000020079	-	81	69.939	ENSPMGG00000008635	tp53rk	61	69.939	Periophthalmus_magnuspinnatus
ENSXMAG00000020079	-	81	52.727	ENSPMAG00000001764	tp53rk	64	52.727	Petromyzon_marinus
ENSXMAG00000020079	-	81	92.638	ENSPFOG00000011783	tp53rk	71	92.638	Poecilia_formosa
ENSXMAG00000020079	-	81	90.798	ENSPLAG00000012951	tp53rk	71	90.798	Poecilia_latipinna
ENSXMAG00000020079	-	81	91.411	ENSPMEG00000015978	tp53rk	71	91.411	Poecilia_mexicana
ENSXMAG00000020079	-	81	93.865	ENSPREG00000021035	tp53rk	69	93.865	Poecilia_reticulata
ENSXMAG00000020079	-	81	61.963	ENSPPYG00000011097	TP53RK	63	61.963	Pongo_abelii
ENSXMAG00000020079	-	84	58.824	ENSPCAG00000014248	TP53RK	66	58.824	Procavia_capensis
ENSXMAG00000020079	-	81	61.350	ENSPCOG00000021538	TP53RK	63	61.350	Propithecus_coquereli
ENSXMAG00000020079	-	81	77.301	ENSPNYG00000007461	tp53rk	69	77.301	Pundamilia_nyererei
ENSXMAG00000020079	-	81	66.871	ENSPNAG00000007871	tp53rk	68	66.871	Pygocentrus_nattereri
ENSXMAG00000020079	-	81	59.639	ENSRNOG00000029470	LOC685619	62	59.639	Rattus_norvegicus
ENSXMAG00000020079	-	81	60.241	ENSRNOG00000007285	Tp53rk	66	60.241	Rattus_norvegicus
ENSXMAG00000020079	-	81	61.350	ENSRBIG00000034747	TP53RK	63	61.350	Rhinopithecus_bieti
ENSXMAG00000020079	-	81	61.350	ENSRROG00000007671	TP53RK	63	61.350	Rhinopithecus_roxellana
ENSXMAG00000020079	-	81	60.736	ENSSBOG00000028863	TP53RK	63	60.736	Saimiri_boliviensis_boliviensis
ENSXMAG00000020079	-	81	63.190	ENSSHAG00000002155	TP53RK	62	63.190	Sarcophilus_harrisii
ENSXMAG00000020079	-	81	71.779	ENSSFOG00015001790	tp53rk	69	71.779	Scleropages_formosus
ENSXMAG00000020079	-	81	69.492	ENSSMAG00000016610	tp53rk	65	69.492	Scophthalmus_maximus
ENSXMAG00000020079	-	81	76.687	ENSSDUG00000006796	tp53rk	69	76.687	Seriola_dumerili
ENSXMAG00000020079	-	81	76.687	ENSSLDG00000021017	tp53rk	69	76.687	Seriola_lalandi_dorsalis
ENSXMAG00000020079	-	81	60.606	ENSSPUG00000003590	TP53RK	63	60.606	Sphenodon_punctatus
ENSXMAG00000020079	-	81	78.528	ENSSPAG00000003918	tp53rk	71	78.528	Stegastes_partitus
ENSXMAG00000020079	-	81	63.804	ENSSSCG00000007452	TP53RK	63	63.804	Sus_scrofa
ENSXMAG00000020079	-	81	68.712	ENSTRUG00000021182	tp53rk	69	68.712	Takifugu_rubripes
ENSXMAG00000020079	-	81	68.712	ENSTNIG00000003803	tp53rk	67	68.712	Tetraodon_nigroviridis
ENSXMAG00000020079	-	81	61.350	ENSTBEG00000016574	TP53RK	63	61.350	Tupaia_belangeri
ENSXMAG00000020079	-	81	61.963	ENSTTRG00000007142	TP53RK	64	61.963	Tursiops_truncatus
ENSXMAG00000020079	-	81	63.190	ENSUAMG00000021617	TP53RK	63	63.190	Ursus_americanus
ENSXMAG00000020079	-	81	62.577	ENSVVUG00000016557	TP53RK	53	62.577	Vulpes_vulpes
ENSXMAG00000020079	-	81	66.871	ENSXETG00000003469	tp53rk	66	66.871	Xenopus_tropicalis
ENSXMAG00000020079	-	87	98.295	ENSXCOG00000003917	tp53rk	82	98.295	Xiphophorus_couchianus
ENSXMAG00000020079	-	81	99.387	ENSXMAG00000023174	tp53rk	71	99.387	Xiphophorus_maculatus
ENSXMAG00000020079	-	81	99.387	ENSXMAG00000025503	-	71	99.387	Xiphophorus_maculatus
ENSXMAG00000020079	-	81	98.773	ENSXMAG00000021217	TP53RK	71	98.773	Xiphophorus_maculatus