EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000020872 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 6574 bases
Position: chr18:5436840-5443413
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000028060	RVT_1	PF00078.27	3.1e-45	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000034715	-	1326	-	ENSXMAP00000028060	441 (aa)	-	-

Gene Model

Click here to download ENSXMAG00000020872's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000020872's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000020872	-	59	41.132	ENSACLG00000006900	-	74	41.132	Astatotilapia_calliptera
ENSXMAG00000020872	-	85	32.732	ENSDARG00000086849	si:dkey-187k19.2	66	32.732	Danio_rerio
ENSXMAG00000020872	-	60	37.956	ENSEBUG00000005774	-	84	37.956	Eptatretus_burgeri
ENSXMAG00000020872	-	76	40.176	ENSHBUG00000020868	-	83	40.176	Haplochromis_burtoni
ENSXMAG00000020872	-	68	39.474	ENSKMAG00000007124	-	62	39.474	Kryptolebias_marmoratus
ENSXMAG00000020872	-	64	36.014	ENSLBEG00000018239	-	94	36.014	Labrus_bergylta
ENSXMAG00000020872	-	64	44.718	ENSLOCG00000018030	-	80	44.718	Lepisosteus_oculatus
ENSXMAG00000020872	-	50	32.189	ENSLOCG00000000597	-	51	32.189	Lepisosteus_oculatus
ENSXMAG00000020872	-	54	33.610	ENSONIG00000020426	-	67	33.610	Oreochromis_niloticus
ENSXMAG00000020872	-	56	34.221	ENSORLG00000029764	-	98	34.221	Oryzias_latipes
ENSXMAG00000020872	-	81	36.785	ENSORLG00000029559	-	91	36.785	Oryzias_latipes
ENSXMAG00000020872	-	79	36.798	ENSORLG00015017584	-	50	36.798	Oryzias_latipes_hsok
ENSXMAG00000020872	-	81	32.880	ENSPFOG00000023623	-	54	32.880	Poecilia_formosa
ENSXMAG00000020872	-	83	72.432	ENSPLAG00000021304	-	88	72.432	Poecilia_latipinna
ENSXMAG00000020872	-	83	72.162	ENSPMEG00000021732	-	90	72.162	Poecilia_mexicana
ENSXMAG00000020872	-	88	76.982	ENSPMEG00000005418	-	98	76.982	Poecilia_mexicana
ENSXMAG00000020872	-	68	34.304	ENSSFOG00015015726	-	98	34.304	Scleropages_formosus
ENSXMAG00000020872	-	59	39.098	ENSSLDG00000000237	-	93	36.986	Seriola_lalandi_dorsalis
ENSXMAG00000020872	-	51	36.564	ENSTNIG00000000750	-	75	36.564	Tetraodon_nigroviridis
ENSXMAG00000020872	-	79	65.374	ENSXCOG00000012075	-	88	65.374	Xiphophorus_couchianus
ENSXMAG00000020872	-	100	99.546	ENSXMAG00000028317	-	100	99.546	Xiphophorus_maculatus