EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000020948 (Gene tree)
Gene ID: 106700466
Gene Symbol: rpl29
Alias: zgc:92868
Full Name: ribosomal protein L29
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 2640 bases
Position: chr20:13625489-13628128
Accession: 106700466
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000036853	Ribosomal_L29e	PF01779.17	4.7e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000022404	-	1148	XM_014475916	ENSXMAP00000036853	64 (aa)	XP_014331402	M4AT65

Gene Model

Click here to download ENSXMAG00000020948's gene model file

Pathways

Pathway ID	Pathway Name	Source
xma03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000020948's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000020948	rpl29	86	98.182	ENSG00000162244	RPL29	97	91.667	Homo_sapiens
ENSXMAG00000020948	rpl29	84	88.889	ENSAPOG00000002586	rpl29	100	84.375	Acanthochromis_polyacanthus
ENSXMAG00000020948	rpl29	84	96.296	ENSACIG00000018340	rpl29	100	92.188	Amphilophus_citrinellus
ENSXMAG00000020948	rpl29	84	92.593	ENSAOCG00000016652	rpl29	100	87.500	Amphiprion_ocellaris
ENSXMAG00000020948	rpl29	84	92.593	ENSAPEG00000005754	rpl29	100	87.500	Amphiprion_percula
ENSXMAG00000020948	rpl29	91	96.552	ENSACAG00000006888	RPL29	89	96.552	Anolis_carolinensis
ENSXMAG00000020948	rpl29	86	98.182	ENSANAG00000024147	-	77	80.435	Aotus_nancymaae
ENSXMAG00000020948	rpl29	100	92.188	ENSACLG00000017820	rpl29	100	92.188	Astatotilapia_calliptera
ENSXMAG00000020948	rpl29	100	87.500	ENSAMXG00000038794	rpl29	100	87.500	Astyanax_mexicanus
ENSXMAG00000020948	rpl29	84	59.259	WBGene00004443	rpl-29	87	59.259	Caenorhabditis_elegans
ENSXMAG00000020948	rpl29	86	98.182	ENSCJAG00000042339	-	77	80.435	Callithrix_jacchus
ENSXMAG00000020948	rpl29	86	98.182	ENSCCAG00000027980	-	58	97.143	Cebus_capucinus
ENSXMAG00000020948	rpl29	72	87.234	ENSCSAG00000017871	-	50	89.286	Chlorocebus_sabaeus
ENSXMAG00000020948	rpl29	81	78.846	ENSCING00000018496	-	90	78.846	Ciona_intestinalis
ENSXMAG00000020948	rpl29	81	78.846	ENSCSAVG00000005231	-	88	78.846	Ciona_savignyi
ENSXMAG00000020948	rpl29	86	98.182	ENSCGRG00001016452	-	81	98.182	Cricetulus_griseus_chok1gshd
ENSXMAG00000020948	rpl29	78	94.000	ENSCSEG00000010267	rpl29	94	91.935	Cynoglossus_semilaevis
ENSXMAG00000020948	rpl29	100	96.875	ENSCVAG00000023098	rpl29	100	96.875	Cyprinodon_variegatus
ENSXMAG00000020948	rpl29	100	85.938	ENSDARG00000077717	rpl29	100	85.938	Danio_rerio
ENSXMAG00000020948	rpl29	78	64.000	FBgn0016726	RpL29	66	64.000	Drosophila_melanogaster
ENSXMAG00000020948	rpl29	67	88.372	ENSEASG00005005507	-	66	88.372	Equus_asinus_asinus
ENSXMAG00000020948	rpl29	95	81.967	ENSELUG00000015592	RL29	87	81.967	Esox_lucius
ENSXMAG00000020948	rpl29	98	52.381	ENSFCAG00000035470	-	58	68.182	Felis_catus
ENSXMAG00000020948	rpl29	81	71.154	ENSFCAG00000043006	-	64	71.154	Felis_catus
ENSXMAG00000020948	rpl29	72	93.478	ENSFALG00000008925	RPL29	81	94.545	Ficedula_albicollis
ENSXMAG00000020948	rpl29	100	96.875	ENSFHEG00000015425	rpl29	100	96.875	Fundulus_heteroclitus
ENSXMAG00000020948	rpl29	84	87.037	ENSGMOG00000003626	rpl29	82	87.097	Gadus_morhua
ENSXMAG00000020948	rpl29	72	97.826	ENSGALG00000026978	RPL29	77	98.182	Gallus_gallus
ENSXMAG00000020948	rpl29	100	100.000	ENSGAFG00000012868	rpl29	100	100.000	Gambusia_affinis
ENSXMAG00000020948	rpl29	95	88.525	ENSGACG00000007041	rpl29	79	88.525	Gasterosteus_aculeatus
ENSXMAG00000020948	rpl29	72	77.083	ENSGAGG00000024203	-	89	77.083	Gopherus_agassizii
ENSXMAG00000020948	rpl29	86	98.182	ENSGGOG00000024691	RPL29	60	94.444	Gorilla_gorilla
ENSXMAG00000020948	rpl29	100	92.188	ENSHBUG00000010519	rpl29	100	92.188	Haplochromis_burtoni
ENSXMAG00000020948	rpl29	78	96.000	ENSHCOG00000000478	rpl29	79	95.161	Hippocampus_comes
ENSXMAG00000020948	rpl29	100	87.500	ENSIPUG00000001196	rpl29	100	87.500	Ictalurus_punctatus
ENSXMAG00000020948	rpl29	100	96.875	ENSKMAG00000011291	rpl29	100	96.875	Kryptolebias_marmoratus
ENSXMAG00000020948	rpl29	84	90.741	ENSLBEG00000016213	rpl29	91	87.097	Labrus_bergylta
ENSXMAG00000020948	rpl29	95	88.525	ENSLACG00000018622	rpl29	95	88.525	Latimeria_chalumnae
ENSXMAG00000020948	rpl29	91	89.655	ENSLACG00000018031	-	90	88.525	Latimeria_chalumnae
ENSXMAG00000020948	rpl29	72	95.652	ENSLOCG00000013798	rpl29	92	91.667	Lepisosteus_oculatus
ENSXMAG00000020948	rpl29	84	96.296	ENSMAMG00000014274	rpl29	67	90.625	Mastacembelus_armatus
ENSXMAG00000020948	rpl29	100	92.188	ENSMZEG00005013519	rpl29	100	92.188	Maylandia_zebra
ENSXMAG00000020948	rpl29	72	97.826	ENSMGAG00000001213	RPL29	77	98.182	Meleagris_gallopavo
ENSXMAG00000020948	rpl29	77	83.673	ENSMICG00000049466	-	74	83.673	Microcebus_murinus
ENSXMAG00000020948	rpl29	100	90.625	ENSMMOG00000010430	rpl29	100	90.625	Mola_mola
ENSXMAG00000020948	rpl29	84	94.444	ENSMALG00000009023	rpl29	82	89.062	Monopterus_albus
ENSXMAG00000020948	rpl29	86	98.182	ENSMUSG00000048758	Rpl29	81	98.182	Mus_musculus
ENSXMAG00000020948	rpl29	100	92.188	ENSNBRG00000022109	rpl29	100	92.188	Neolamprologus_brichardi
ENSXMAG00000020948	rpl29	98	92.063	ENSONIG00000014377	rpl29	100	92.063	Oreochromis_niloticus
ENSXMAG00000020948	rpl29	100	92.188	ENSORLG00000023610	rpl29	67	92.188	Oryzias_latipes
ENSXMAG00000020948	rpl29	100	92.188	ENSORLG00020018665	rpl29	67	92.188	Oryzias_latipes_hni
ENSXMAG00000020948	rpl29	100	92.188	ENSORLG00015014455	rpl29	67	92.188	Oryzias_latipes_hsok
ENSXMAG00000020948	rpl29	100	93.750	ENSOMEG00000019919	rpl29	100	93.750	Oryzias_melastigma
ENSXMAG00000020948	rpl29	56	94.444	ENSPPAG00000037142	-	61	94.444	Pan_paniscus
ENSXMAG00000020948	rpl29	81	73.077	ENSPPRG00000011689	-	80	73.077	Panthera_pardus
ENSXMAG00000020948	rpl29	81	71.154	ENSPTIG00000011913	-	63	71.154	Panthera_tigris_altaica
ENSXMAG00000020948	rpl29	86	98.182	ENSPTRG00000043237	RPL29	61	94.444	Pan_troglodytes
ENSXMAG00000020948	rpl29	72	93.478	ENSPKIG00000025048	rpl29	91	91.667	Paramormyrops_kingsleyae
ENSXMAG00000020948	rpl29	72	97.826	ENSPSIG00000014699	RPL29	92	94.828	Pelodiscus_sinensis
ENSXMAG00000020948	rpl29	97	87.097	ENSPMGG00000005361	rpl29	91	87.097	Periophthalmus_magnuspinnatus
ENSXMAG00000020948	rpl29	95	98.361	ENSPFOG00000011385	rpl29	100	98.361	Poecilia_formosa
ENSXMAG00000020948	rpl29	100	96.875	ENSPLAG00000012042	rpl29	100	96.875	Poecilia_latipinna
ENSXMAG00000020948	rpl29	100	98.438	ENSPMEG00000018297	rpl29	100	98.438	Poecilia_mexicana
ENSXMAG00000020948	rpl29	100	98.438	ENSPREG00000007066	rpl29	100	98.438	Poecilia_reticulata
ENSXMAG00000020948	rpl29	100	92.188	ENSPNYG00000019481	rpl29	100	92.188	Pundamilia_nyererei
ENSXMAG00000020948	rpl29	100	89.062	ENSPNAG00000007550	rpl29	100	89.062	Pygocentrus_nattereri
ENSXMAG00000020948	rpl29	81	88.462	ENSRNOG00000025794	AABR07021239.1	69	88.462	Rattus_norvegicus
ENSXMAG00000020948	rpl29	72	73.913	YFR032C-A	RPL29	100	66.102	Saccharomyces_cerevisiae
ENSXMAG00000020948	rpl29	84	92.593	ENSSMAG00000013571	rpl29	100	89.062	Scophthalmus_maximus
ENSXMAG00000020948	rpl29	78	94.000	ENSSDUG00000016140	rpl29	100	89.062	Seriola_dumerili
ENSXMAG00000020948	rpl29	72	65.957	ENSSDUG00000020458	-	76	65.957	Seriola_dumerili
ENSXMAG00000020948	rpl29	78	94.000	ENSSLDG00000003932	rpl29	100	89.062	Seriola_lalandi_dorsalis
ENSXMAG00000020948	rpl29	72	97.826	ENSSPUG00000003760	RPL29	92	94.828	Sphenodon_punctatus
ENSXMAG00000020948	rpl29	84	87.037	ENSSPAG00000020292	rpl29	100	81.250	Stegastes_partitus
ENSXMAG00000020948	rpl29	59	92.105	ENSSSCG00000037047	-	96	93.617	Sus_scrofa
ENSXMAG00000020948	rpl29	84	68.519	ENSSSCG00000031314	-	85	68.519	Sus_scrofa
ENSXMAG00000020948	rpl29	72	93.478	ENSTGUG00000006027	RPL29	87	94.545	Taeniopygia_guttata
ENSXMAG00000020948	rpl29	98	87.302	ENSTRUG00000022273	rpl29	97	87.302	Takifugu_rubripes
ENSXMAG00000020948	rpl29	83	92.453	ENSTNIG00000014816	rpl29	90	90.164	Tetraodon_nigroviridis
ENSXMAG00000020948	rpl29	100	73.438	ENSTBEG00000000807	-	78	73.438	Tupaia_belangeri
ENSXMAG00000020948	rpl29	83	84.211	ENSUAMG00000002601	-	100	84.211	Ursus_americanus
ENSXMAG00000020948	rpl29	72	91.304	ENSVVUG00000012400	-	96	92.727	Vulpes_vulpes
ENSXMAG00000020948	rpl29	86	96.364	ENSXETG00000010811	rpl29	73	96.364	Xenopus_tropicalis
ENSXMAG00000020948	rpl29	100	96.875	ENSXCOG00000013543	rpl29	100	96.875	Xiphophorus_couchianus