EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000021061 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 3741 bases
Position: chr10:16177699-16181439
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000039351	RVT_1	PF00078.27	2.2e-45	1	1
ENSXMAP00000039351	RNase_H	PF00075.24	9.2e-07	1	1
ENSXMAP00000039351	Exo_endo_phos	PF03372.23	2e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000022798	-	3741	-	ENSXMAP00000039351	1246 (aa)	-	-

Gene Model

Click here to download ENSXMAG00000021061's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000021061's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000021061	-	100	45.280	ENSAMXG00000043500	-	99	45.280	Astyanax_mexicanus
ENSXMAG00000021061	-	99	46.363	ENSDARG00000099201	BX908731.1	99	46.363	Danio_rerio
ENSXMAG00000021061	-	99	46.283	ENSDARG00000103037	CR848788.1	99	46.283	Danio_rerio
ENSXMAG00000021061	-	100	48.361	ENSDARG00000103436	BX548028.1	99	48.361	Danio_rerio
ENSXMAG00000021061	-	65	59.282	ENSKMAG00000021014	-	100	59.282	Kryptolebias_marmoratus
ENSXMAG00000021061	-	68	51.601	ENSKMAG00000012711	-	100	51.601	Kryptolebias_marmoratus
ENSXMAG00000021061	-	100	55.092	ENSKMAG00000004415	-	100	55.092	Kryptolebias_marmoratus
ENSXMAG00000021061	-	100	55.092	ENSKMAG00000003982	-	100	55.092	Kryptolebias_marmoratus
ENSXMAG00000021061	-	100	46.380	ENSORLG00000026314	-	99	46.380	Oryzias_latipes
ENSXMAG00000021061	-	100	46.099	ENSORLG00000024423	-	99	46.099	Oryzias_latipes
ENSXMAG00000021061	-	100	46.099	ENSORLG00000027174	-	99	46.099	Oryzias_latipes
ENSXMAG00000021061	-	100	46.258	ENSORLG00000023592	-	99	46.258	Oryzias_latipes
ENSXMAG00000021061	-	100	46.338	ENSORLG00020011427	-	99	46.215	Oryzias_latipes_hni
ENSXMAG00000021061	-	100	46.576	ENSORLG00020020238	-	99	46.454	Oryzias_latipes_hni
ENSXMAG00000021061	-	71	45.880	ENSORLG00020019901	-	100	45.880	Oryzias_latipes_hni
ENSXMAG00000021061	-	100	46.497	ENSORLG00020018543	-	99	46.497	Oryzias_latipes_hni
ENSXMAG00000021061	-	87	46.630	ENSORLG00015013792	-	99	46.630	Oryzias_latipes_hsok
ENSXMAG00000021061	-	85	47.928	ENSOMEG00000003836	-	97	47.928	Oryzias_melastigma
ENSXMAG00000021061	-	100	48.923	ENSPKIG00000019189	-	99	48.923	Paramormyrops_kingsleyae
ENSXMAG00000021061	-	90	47.336	ENSXMAG00000022223	-	99	47.336	Xiphophorus_maculatus
ENSXMAG00000021061	-	90	47.336	ENSXMAG00000026588	-	99	47.336	Xiphophorus_maculatus
ENSXMAG00000021061	-	100	56.571	ENSXMAG00000021755	-	100	56.571	Xiphophorus_maculatus
ENSXMAG00000021061	-	69	51.042	ENSXMAG00000020874	-	95	51.042	Xiphophorus_maculatus
ENSXMAG00000021061	-	82	50.392	ENSXMAG00000027130	-	99	50.196	Xiphophorus_maculatus
ENSXMAG00000021061	-	63	79.082	ENSXMAG00000023377	-	100	79.082	Xiphophorus_maculatus
ENSXMAG00000021061	-	100	56.170	ENSXMAG00000028309	-	100	56.170	Xiphophorus_maculatus
ENSXMAG00000021061	-	61	42.593	ENSXMAG00000025430	-	99	42.593	Xiphophorus_maculatus
ENSXMAG00000021061	-	64	97.753	ENSXMAG00000023126	-	100	97.753	Xiphophorus_maculatus
ENSXMAG00000021061	-	82	49.902	ENSXMAG00000023078	-	99	49.706	Xiphophorus_maculatus
ENSXMAG00000021061	-	82	50.098	ENSXMAG00000029923	-	99	49.902	Xiphophorus_maculatus
ENSXMAG00000021061	-	71	46.689	ENSXMAG00000024143	-	100	46.059	Xiphophorus_maculatus
ENSXMAG00000021061	-	92	45.635	ENSXMAG00000029466	-	100	45.156	Xiphophorus_maculatus
ENSXMAG00000021061	-	90	47.336	ENSXMAG00000026248	-	99	47.336	Xiphophorus_maculatus
ENSXMAG00000021061	-	100	56.571	ENSXMAG00000021070	-	100	56.571	Xiphophorus_maculatus