EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000021195 (Gene tree)
Gene ID: 102226058
Gene Symbol: -
Alias: -
Full Name: zinc finger protein 300-like
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 5337 bases
Position: chr16:9910744-9916080
Accession: 102226058
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000023147	zf-C2H2	PF00096.26	2.6e-15	1	4
ENSXMAP00000023147	zf-C2H2	PF00096.26	2.6e-15	2	4
ENSXMAP00000023147	zf-C2H2	PF00096.26	2.6e-15	3	4
ENSXMAP00000023147	zf-C2H2	PF00096.26	2.6e-15	4	4
ENSXMAP00000023147	zf-met	PF12874.7	9.8e-06	1	2
ENSXMAP00000023147	zf-met	PF12874.7	9.8e-06	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000022342	-	3904	XM_023348807	ENSXMAP00000023147	471 (aa)	XP_023204575	UPI000C6EC32D

Gene Model

Click here to download ENSXMAG00000021195's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000021195's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000021195	-	99	63.636	ENSATEG00000023773	-	98	63.636	Anabas_testudineus
ENSXMAG00000021195	-	97	51.096	ENSCSEG00000011817	-	96	51.096	Cynoglossus_semilaevis
ENSXMAG00000021195	-	99	73.348	ENSFHEG00000015400	-	98	73.348	Fundulus_heteroclitus
ENSXMAG00000021195	-	98	91.739	ENSGAFG00000013839	-	99	91.739	Gambusia_affinis
ENSXMAG00000021195	-	97	62.009	ENSMAMG00000020468	-	99	62.227	Mastacembelus_armatus
ENSXMAG00000021195	-	69	81.429	ENSNBRG00000019881	-	97	81.429	Neolamprologus_brichardi
ENSXMAG00000021195	-	58	50.545	ENSORLG00015013828	-	85	50.545	Oryzias_latipes_hsok
ENSXMAG00000021195	-	97	54.783	ENSOMEG00000005928	-	98	54.565	Oryzias_melastigma
ENSXMAG00000021195	-	62	95.789	ENSPFOG00000005998	-	100	89.375	Poecilia_formosa
ENSXMAG00000021195	-	100	90.909	ENSPLAG00000001674	-	100	91.121	Poecilia_latipinna
ENSXMAG00000021195	-	100	90.890	ENSPMEG00000013200	-	100	91.102	Poecilia_mexicana
ENSXMAG00000021195	-	97	61.354	ENSSMAG00000002598	-	99	62.009	Scophthalmus_maximus
ENSXMAG00000021195	-	96	64.454	ENSSDUG00000015456	-	96	64.668	Seriola_dumerili
ENSXMAG00000021195	-	99	65.812	ENSSPAG00000017203	-	98	65.812	Stegastes_partitus