EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000021235 (Gene tree)
Gene ID: 102237547
Gene Symbol: si:ch211-11k18.4
Alias: -
Full Name: uncharacterized LOC102237547
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 7251 bases
Position: chr16:16399259-16406509
Accession: 102237547
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000025321	MMR_HSR1	PF01926.23	3.6e-06	1	1
ENSXMAP00000023217	MMR_HSR1	PF01926.23	3.7e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000038272	-	1323	-	ENSXMAP00000023217	440 (aa)	-	-
ENSXMAT00000020926	-	3385	XM_005807010	ENSXMAP00000025321	451 (aa)	XP_005807067	UPI0003B3EFFC

Gene Model

Click here to download ENSXMAG00000021235's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000021235's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000021235	si:ch211-11k18.4	99	89.310	ENSAPOG00000018833	si:ch211-11k18.4	99	89.310	Acanthochromis_polyacanthus
ENSXMAG00000021235	si:ch211-11k18.4	99	60.667	ENSAPOG00000010378	si:dkey-98f17.5	100	60.444	Acanthochromis_polyacanthus
ENSXMAG00000021235	si:ch211-11k18.4	99	86.222	ENSACIG00000006696	si:ch211-11k18.4	99	86.222	Amphilophus_citrinellus
ENSXMAG00000021235	si:ch211-11k18.4	99	60.222	ENSACIG00000017719	si:dkey-98f17.5	100	60.222	Amphilophus_citrinellus
ENSXMAG00000021235	si:ch211-11k18.4	99	60.889	ENSAOCG00000008661	si:dkey-98f17.5	100	60.667	Amphiprion_ocellaris
ENSXMAG00000021235	si:ch211-11k18.4	100	90.244	ENSAOCG00000014284	si:ch211-11k18.4	100	90.244	Amphiprion_ocellaris
ENSXMAG00000021235	si:ch211-11k18.4	100	90.022	ENSAPEG00000014910	si:ch211-11k18.4	100	90.022	Amphiprion_percula
ENSXMAG00000021235	si:ch211-11k18.4	99	60.889	ENSAPEG00000022447	si:dkey-98f17.5	100	60.667	Amphiprion_percula
ENSXMAG00000021235	si:ch211-11k18.4	100	87.805	ENSATEG00000004775	si:ch211-11k18.4	100	87.805	Anabas_testudineus
ENSXMAG00000021235	si:ch211-11k18.4	99	60.889	ENSATEG00000007188	si:dkey-98f17.5	100	60.889	Anabas_testudineus
ENSXMAG00000021235	si:ch211-11k18.4	98	64.719	ENSACAG00000028632	-	98	64.574	Anolis_carolinensis
ENSXMAG00000021235	si:ch211-11k18.4	99	88.196	ENSACLG00000007907	si:ch211-11k18.4	99	88.196	Astatotilapia_calliptera
ENSXMAG00000021235	si:ch211-11k18.4	99	60.222	ENSACLG00000001308	si:dkey-98f17.5	100	60.000	Astatotilapia_calliptera
ENSXMAG00000021235	si:ch211-11k18.4	99	60.444	ENSAMXG00000001190	si:dkey-98f17.5	100	60.444	Astyanax_mexicanus
ENSXMAG00000021235	si:ch211-11k18.4	99	82.222	ENSAMXG00000017817	si:ch211-11k18.4	100	82.222	Astyanax_mexicanus
ENSXMAG00000021235	si:ch211-11k18.4	84	61.765	ENSCING00000020807	-	99	61.273	Ciona_intestinalis
ENSXMAG00000021235	si:ch211-11k18.4	99	59.333	ENSCSAVG00000009987	-	100	59.333	Ciona_savignyi
ENSXMAG00000021235	si:ch211-11k18.4	99	59.867	ENSCSEG00000017512	si:dkey-98f17.5	98	60.471	Cynoglossus_semilaevis
ENSXMAG00000021235	si:ch211-11k18.4	100	83.149	ENSCSEG00000017661	si:ch211-11k18.4	100	83.149	Cynoglossus_semilaevis
ENSXMAG00000021235	si:ch211-11k18.4	99	60.000	ENSCVAG00000011351	si:dkey-98f17.5	100	60.000	Cyprinodon_variegatus
ENSXMAG00000021235	si:ch211-11k18.4	100	92.683	ENSCVAG00000015346	si:ch211-11k18.4	100	92.683	Cyprinodon_variegatus
ENSXMAG00000021235	si:ch211-11k18.4	99	82.000	ENSDARG00000087869	si:ch211-11k18.4	100	89.796	Danio_rerio
ENSXMAG00000021235	si:ch211-11k18.4	98	60.544	ENSDARG00000068863	si:dkey-98f17.5	100	60.317	Danio_rerio
ENSXMAG00000021235	si:ch211-11k18.4	83	58.696	ENSEBUG00000007620	si:dkey-98f17.5	89	62.462	Eptatretus_burgeri
ENSXMAG00000021235	si:ch211-11k18.4	99	58.889	ENSELUG00000003365	si:dkey-98f17.5	100	59.333	Esox_lucius
ENSXMAG00000021235	si:ch211-11k18.4	100	90.022	ENSFHEG00000019820	si:ch211-11k18.4	100	90.022	Fundulus_heteroclitus
ENSXMAG00000021235	si:ch211-11k18.4	99	60.000	ENSFHEG00000012744	si:dkey-98f17.5	100	60.000	Fundulus_heteroclitus
ENSXMAG00000021235	si:ch211-11k18.4	90	78.218	ENSGMOG00000003492	si:ch211-11k18.4	100	78.218	Gadus_morhua
ENSXMAG00000021235	si:ch211-11k18.4	99	59.778	ENSGAFG00000012362	si:dkey-98f17.5	89	59.778	Gambusia_affinis
ENSXMAG00000021235	si:ch211-11k18.4	100	95.344	ENSGAFG00000005677	si:ch211-11k18.4	100	95.344	Gambusia_affinis
ENSXMAG00000021235	si:ch211-11k18.4	90	87.624	ENSGACG00000013134	si:ch211-11k18.4	100	87.624	Gasterosteus_aculeatus
ENSXMAG00000021235	si:ch211-11k18.4	59	73.846	ENSGACG00000009399	si:dkey-98f17.5	100	73.846	Gasterosteus_aculeatus
ENSXMAG00000021235	si:ch211-11k18.4	99	88.419	ENSHBUG00000020638	si:ch211-11k18.4	99	88.419	Haplochromis_burtoni
ENSXMAG00000021235	si:ch211-11k18.4	99	60.444	ENSHBUG00000008331	si:dkey-98f17.5	100	60.222	Haplochromis_burtoni
ENSXMAG00000021235	si:ch211-11k18.4	99	59.276	ENSHCOG00000016505	si:dkey-98f17.5	98	59.276	Hippocampus_comes
ENSXMAG00000021235	si:ch211-11k18.4	99	87.111	ENSHCOG00000014773	si:ch211-11k18.4	100	87.111	Hippocampus_comes
ENSXMAG00000021235	si:ch211-11k18.4	90	68.317	ENSIPUG00000016694	si:ch211-11k18.4	85	69.689	Ictalurus_punctatus
ENSXMAG00000021235	si:ch211-11k18.4	96	78.066	ENSIPUG00000016678	si:ch211-11k18.4	99	78.302	Ictalurus_punctatus
ENSXMAG00000021235	si:ch211-11k18.4	99	58.093	ENSIPUG00000019981	si:dkey-98f17.5	100	58.093	Ictalurus_punctatus
ENSXMAG00000021235	si:ch211-11k18.4	99	89.333	ENSKMAG00000009327	si:ch211-11k18.4	99	89.333	Kryptolebias_marmoratus
ENSXMAG00000021235	si:ch211-11k18.4	99	59.111	ENSKMAG00000014997	si:dkey-98f17.5	100	58.889	Kryptolebias_marmoratus
ENSXMAG00000021235	si:ch211-11k18.4	99	60.222	ENSLBEG00000012756	si:dkey-98f17.5	100	60.222	Labrus_bergylta
ENSXMAG00000021235	si:ch211-11k18.4	99	62.138	ENSLACG00000004899	-	99	62.138	Latimeria_chalumnae
ENSXMAG00000021235	si:ch211-11k18.4	99	71.397	ENSLACG00000006280	si:ch211-11k18.4	100	71.397	Latimeria_chalumnae
ENSXMAG00000021235	si:ch211-11k18.4	98	59.685	ENSLACG00000017433	si:dkey-98f17.5	98	60.090	Latimeria_chalumnae
ENSXMAG00000021235	si:ch211-11k18.4	99	59.735	ENSLOCG00000003824	si:dkey-98f17.5	99	59.735	Lepisosteus_oculatus
ENSXMAG00000021235	si:ch211-11k18.4	99	60.000	ENSMAMG00000014528	si:dkey-98f17.5	100	59.778	Mastacembelus_armatus
ENSXMAG00000021235	si:ch211-11k18.4	96	89.120	ENSMAMG00000002536	si:ch211-11k18.4	99	89.120	Mastacembelus_armatus
ENSXMAG00000021235	si:ch211-11k18.4	99	60.444	ENSMZEG00005016572	si:dkey-98f17.5	100	60.222	Maylandia_zebra
ENSXMAG00000021235	si:ch211-11k18.4	99	87.973	ENSMZEG00005008941	si:ch211-11k18.4	99	87.973	Maylandia_zebra
ENSXMAG00000021235	si:ch211-11k18.4	99	80.401	ENSMMOG00000012485	si:ch211-11k18.4	99	80.401	Mola_mola
ENSXMAG00000021235	si:ch211-11k18.4	100	87.361	ENSMALG00000019735	si:ch211-11k18.4	100	87.361	Monopterus_albus
ENSXMAG00000021235	si:ch211-11k18.4	98	60.909	ENSMALG00000012761	si:dkey-98f17.5	100	61.364	Monopterus_albus
ENSXMAG00000021235	si:ch211-11k18.4	96	87.963	ENSNBRG00000002220	si:ch211-11k18.4	98	87.963	Neolamprologus_brichardi
ENSXMAG00000021235	si:ch211-11k18.4	99	60.134	ENSNBRG00000006068	si:dkey-98f17.5	100	60.134	Neolamprologus_brichardi
ENSXMAG00000021235	si:ch211-11k18.4	99	60.667	ENSONIG00000013568	si:dkey-98f17.5	100	60.444	Oreochromis_niloticus
ENSXMAG00000021235	si:ch211-11k18.4	99	88.864	ENSONIG00000019412	si:ch211-11k18.4	99	88.864	Oreochromis_niloticus
ENSXMAG00000021235	si:ch211-11k18.4	100	86.918	ENSORLG00000012015	si:ch211-11k18.4	100	86.918	Oryzias_latipes
ENSXMAG00000021235	si:ch211-11k18.4	91	61.463	ENSORLG00000007958	si:dkey-98f17.5	95	61.463	Oryzias_latipes
ENSXMAG00000021235	si:ch211-11k18.4	99	59.556	ENSORLG00020013350	si:dkey-98f17.5	100	59.556	Oryzias_latipes_hni
ENSXMAG00000021235	si:ch211-11k18.4	100	86.475	ENSORLG00020012386	si:ch211-11k18.4	100	86.475	Oryzias_latipes_hni
ENSXMAG00000021235	si:ch211-11k18.4	99	59.556	ENSORLG00015002000	si:dkey-98f17.5	100	59.556	Oryzias_latipes_hsok
ENSXMAG00000021235	si:ch211-11k18.4	100	87.140	ENSORLG00015022862	si:ch211-11k18.4	100	87.140	Oryzias_latipes_hsok
ENSXMAG00000021235	si:ch211-11k18.4	100	87.140	ENSOMEG00000018686	si:ch211-11k18.4	100	87.140	Oryzias_melastigma
ENSXMAG00000021235	si:ch211-11k18.4	99	59.333	ENSOMEG00000003154	si:dkey-98f17.5	100	59.111	Oryzias_melastigma
ENSXMAG00000021235	si:ch211-11k18.4	99	80.667	ENSPKIG00000018807	si:ch211-11k18.4	100	80.667	Paramormyrops_kingsleyae
ENSXMAG00000021235	si:ch211-11k18.4	99	76.444	ENSPKIG00000023918	-	98	76.444	Paramormyrops_kingsleyae
ENSXMAG00000021235	si:ch211-11k18.4	99	59.778	ENSPKIG00000024621	si:dkey-98f17.5	100	59.778	Paramormyrops_kingsleyae
ENSXMAG00000021235	si:ch211-11k18.4	100	86.475	ENSPMGG00000016507	si:ch211-11k18.4	100	86.475	Periophthalmus_magnuspinnatus
ENSXMAG00000021235	si:ch211-11k18.4	99	60.089	ENSPMGG00000019065	si:dkey-98f17.5	100	59.778	Periophthalmus_magnuspinnatus
ENSXMAG00000021235	si:ch211-11k18.4	99	59.823	ENSPFOG00000015142	si:dkey-98f17.5	100	59.823	Poecilia_formosa
ENSXMAG00000021235	si:ch211-11k18.4	100	97.118	ENSPFOG00000007976	si:ch211-11k18.4	100	97.118	Poecilia_formosa
ENSXMAG00000021235	si:ch211-11k18.4	99	60.222	ENSPLAG00000003709	si:dkey-98f17.5	100	60.222	Poecilia_latipinna
ENSXMAG00000021235	si:ch211-11k18.4	100	96.896	ENSPLAG00000019794	si:ch211-11k18.4	100	96.896	Poecilia_latipinna
ENSXMAG00000021235	si:ch211-11k18.4	99	60.222	ENSPMEG00000018709	si:dkey-98f17.5	94	60.222	Poecilia_mexicana
ENSXMAG00000021235	si:ch211-11k18.4	100	96.896	ENSPMEG00000024198	si:ch211-11k18.4	100	96.896	Poecilia_mexicana
ENSXMAG00000021235	si:ch211-11k18.4	93	91.059	ENSPREG00000015319	si:ch211-11k18.4	97	91.059	Poecilia_reticulata
ENSXMAG00000021235	si:ch211-11k18.4	98	61.111	ENSPREG00000000708	si:dkey-98f17.5	100	61.111	Poecilia_reticulata
ENSXMAG00000021235	si:ch211-11k18.4	99	88.419	ENSPNYG00000017099	si:ch211-11k18.4	99	88.419	Pundamilia_nyererei
ENSXMAG00000021235	si:ch211-11k18.4	99	60.444	ENSPNYG00000017266	si:dkey-98f17.5	100	60.222	Pundamilia_nyererei
ENSXMAG00000021235	si:ch211-11k18.4	99	83.964	ENSPNAG00000022138	si:ch211-11k18.4	99	83.964	Pygocentrus_nattereri
ENSXMAG00000021235	si:ch211-11k18.4	99	60.444	ENSPNAG00000021352	si:dkey-98f17.5	100	60.444	Pygocentrus_nattereri
ENSXMAG00000021235	si:ch211-11k18.4	99	58.811	ENSSFOG00015017965	si:dkey-98f17.5	100	57.743	Scleropages_formosus
ENSXMAG00000021235	si:ch211-11k18.4	99	77.951	ENSSFOG00015000985	si:ch211-11k18.4	94	77.951	Scleropages_formosus
ENSXMAG00000021235	si:ch211-11k18.4	99	60.000	ENSSMAG00000011905	si:dkey-98f17.5	100	59.778	Scophthalmus_maximus
ENSXMAG00000021235	si:ch211-11k18.4	100	87.805	ENSSMAG00000009651	si:ch211-11k18.4	100	87.805	Scophthalmus_maximus
ENSXMAG00000021235	si:ch211-11k18.4	98	59.551	ENSSDUG00000013457	si:dkey-98f17.5	99	59.326	Seriola_dumerili
ENSXMAG00000021235	si:ch211-11k18.4	100	89.135	ENSSDUG00000016411	si:ch211-11k18.4	100	89.135	Seriola_dumerili
ENSXMAG00000021235	si:ch211-11k18.4	100	89.135	ENSSLDG00000019145	si:ch211-11k18.4	100	89.135	Seriola_lalandi_dorsalis
ENSXMAG00000021235	si:ch211-11k18.4	98	59.326	ENSSLDG00000025395	si:dkey-98f17.5	99	59.101	Seriola_lalandi_dorsalis
ENSXMAG00000021235	si:ch211-11k18.4	87	66.497	ENSSPUG00000010096	-	99	66.497	Sphenodon_punctatus
ENSXMAG00000021235	si:ch211-11k18.4	99	60.889	ENSSPAG00000018800	si:dkey-98f17.5	100	60.889	Stegastes_partitus
ENSXMAG00000021235	si:ch211-11k18.4	100	88.470	ENSSPAG00000010697	si:ch211-11k18.4	100	88.470	Stegastes_partitus
ENSXMAG00000021235	si:ch211-11k18.4	100	86.253	ENSTRUG00000020291	si:ch211-11k18.4	100	86.253	Takifugu_rubripes
ENSXMAG00000021235	si:ch211-11k18.4	99	59.333	ENSTRUG00000021287	si:dkey-98f17.5	100	59.161	Takifugu_rubripes
ENSXMAG00000021235	si:ch211-11k18.4	99	67.035	ENSXETG00000031783	-	99	67.035	Xenopus_tropicalis
ENSXMAG00000021235	si:ch211-11k18.4	100	100.000	ENSXCOG00000018094	si:ch211-11k18.4	100	100.000	Xiphophorus_couchianus
ENSXMAG00000021235	si:ch211-11k18.4	99	60.134	ENSXCOG00000017002	si:dkey-98f17.5	100	60.134	Xiphophorus_couchianus
ENSXMAG00000021235	si:ch211-11k18.4	99	59.778	ENSXMAG00000007688	si:dkey-98f17.5	95	59.778	Xiphophorus_maculatus