EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000021384 (Gene tree)
Gene ID: 102234793
Gene Symbol: -
Alias: im:7148349|si:ch211-125c5.1
Full Name: spen family transcriptional repressor
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 28643 bases
Position: chr1:7482836-7511478
Accession: 102234793
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000037122	RRM_5	PF13893.6	2.1e-07	1	2
ENSXMAP00000037122	RRM_5	PF13893.6	2.1e-07	2	2
ENSXMAP00000037122	RRM_1	PF00076.22	4.6e-40	1	3
ENSXMAP00000037122	RRM_1	PF00076.22	4.6e-40	2	3
ENSXMAP00000037122	RRM_1	PF00076.22	4.6e-40	3	3
ENSXMAP00000024187	RRM_1	PF00076.22	1.3e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000022153	-	843	-	ENSXMAP00000024187	280 (aa)	-	-
ENSXMAT00000034765	-	12607	XM_023333738	ENSXMAP00000037122	3524 (aa)	XP_023189506	UPI000C6D9058

Gene Model

Click here to download ENSXMAG00000021384's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000021384's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000021384	-	90	72.453	ENSG00000065526	SPEN	85	90.476	Homo_sapiens
ENSXMAG00000021384	-	97	82.840	ENSAPOG00000011411	si:ch1073-335m2.2	99	82.840	Acanthochromis_polyacanthus
ENSXMAG00000021384	-	87	96.067	ENSAPOG00000009853	-	87	96.089	Acanthochromis_polyacanthus
ENSXMAG00000021384	-	90	71.698	ENSAMEG00000011817	SPEN	96	44.997	Ailuropoda_melanoleuca
ENSXMAG00000021384	-	85	76.692	ENSAOCG00000008077	si:ch1073-335m2.2	98	76.692	Amphiprion_ocellaris
ENSXMAG00000021384	-	87	96.067	ENSAOCG00000014505	-	100	79.060	Amphiprion_ocellaris
ENSXMAG00000021384	-	87	96.067	ENSAPEG00000010288	-	100	79.004	Amphiprion_percula
ENSXMAG00000021384	-	97	82.840	ENSAPEG00000013515	si:ch1073-335m2.2	99	82.840	Amphiprion_percula
ENSXMAG00000021384	-	88	96.133	ENSATEG00000005627	-	100	76.229	Anabas_testudineus
ENSXMAG00000021384	-	97	77.717	ENSATEG00000007674	si:ch1073-335m2.2	99	77.717	Anabas_testudineus
ENSXMAG00000021384	-	80	68.908	ENSAPLG00000012618	SPEN	100	46.251	Anas_platyrhynchos
ENSXMAG00000021384	-	80	64.173	ENSACAG00000013761	SPEN	100	43.357	Anolis_carolinensis
ENSXMAG00000021384	-	81	68.750	ENSANAG00000034428	SPEN	96	44.374	Aotus_nancymaae
ENSXMAG00000021384	-	95	79.651	ENSACLG00000021433	si:ch1073-335m2.2	99	82.840	Astatotilapia_calliptera
ENSXMAG00000021384	-	87	94.382	ENSACLG00000016922	-	100	76.611	Astatotilapia_calliptera
ENSXMAG00000021384	-	87	83.799	ENSAMXG00000012485	spen	100	53.939	Astyanax_mexicanus
ENSXMAG00000021384	-	90	71.698	ENSBTAG00000018729	SPEN	97	44.749	Bos_taurus
ENSXMAG00000021384	-	90	72.075	ENSCJAG00000008527	SPEN	96	44.728	Callithrix_jacchus
ENSXMAG00000021384	-	90	72.453	ENSCAFG00000016132	-	91	51.094	Canis_familiaris
ENSXMAG00000021384	-	90	72.453	ENSCHIG00000025070	SPEN	97	44.588	Capra_hircus
ENSXMAG00000021384	-	80	45.123	ENSTSYG00000036016	SPEN	96	42.593	Carlito_syrichta
ENSXMAG00000021384	-	80	69.456	ENSCAPG00000013803	SPEN	100	43.064	Cavia_aperea
ENSXMAG00000021384	-	80	69.328	ENSCPOG00000014036	SPEN	96	44.651	Cavia_porcellus
ENSXMAG00000021384	-	90	72.075	ENSCCAG00000020258	SPEN	96	41.288	Cebus_capucinus
ENSXMAG00000021384	-	83	86.667	ENSCATG00000015079	SPEN	96	44.705	Cercocebus_atys
ENSXMAG00000021384	-	80	69.328	ENSCLAG00000002018	SPEN	97	45.062	Chinchilla_lanigera
ENSXMAG00000021384	-	90	72.453	ENSCSAG00000000841	SPEN	96	44.444	Chlorocebus_sabaeus
ENSXMAG00000021384	-	90	72.075	ENSCPBG00000010477	SPEN	100	46.451	Chrysemys_picta_bellii
ENSXMAG00000021384	-	88	66.023	ENSCANG00000034547	SPEN	96	42.757	Colobus_angolensis_palliatus
ENSXMAG00000021384	-	90	73.208	ENSCGRG00001007725	Spen	97	45.018	Cricetulus_griseus_chok1gshd
ENSXMAG00000021384	-	70	69.524	ENSCGRG00000010581	Spen	97	43.400	Cricetulus_griseus_crigri
ENSXMAG00000021384	-	99	73.013	ENSCSEG00000003915	-	100	73.013	Cynoglossus_semilaevis
ENSXMAG00000021384	-	100	86.731	ENSCVAG00000016346	-	100	86.731	Cyprinodon_variegatus
ENSXMAG00000021384	-	90	66.454	ENSDARG00000074245	spen	100	91.852	Danio_rerio
ENSXMAG00000021384	-	99	45.077	ENSDARG00000074332	si:ch1073-335m2.2	100	45.305	Danio_rerio
ENSXMAG00000021384	-	90	72.830	ENSDNOG00000041948	SPEN	96	45.435	Dasypus_novemcinctus
ENSXMAG00000021384	-	81	68.750	ENSDORG00000023909	Spen	96	43.361	Dipodomys_ordii
ENSXMAG00000021384	-	80	68.354	ENSETEG00000016692	-	55	60.209	Echinops_telfairi
ENSXMAG00000021384	-	61	63.587	ENSEBUG00000005464	-	63	67.213	Eptatretus_burgeri
ENSXMAG00000021384	-	94	86.765	ENSEASG00005015911	SPEN	96	86.765	Equus_asinus_asinus
ENSXMAG00000021384	-	94	86.765	ENSECAG00000008833	SPEN	96	86.765	Equus_caballus
ENSXMAG00000021384	-	90	70.566	ENSEEUG00000010255	SPEN	60	88.095	Erinaceus_europaeus
ENSXMAG00000021384	-	86	78.646	ENSELUG00000007726	si:ch1073-335m2.2	99	81.215	Esox_lucius
ENSXMAG00000021384	-	78	68.670	ENSFDAG00000010212	SPEN	88	46.408	Fukomys_damarensis
ENSXMAG00000021384	-	90	92.996	ENSFHEG00000013136	-	92	95.513	Fundulus_heteroclitus
ENSXMAG00000021384	-	98	65.060	ENSFHEG00000004544	si:ch1073-335m2.2	93	78.804	Fundulus_heteroclitus
ENSXMAG00000021384	-	97	73.367	ENSGMOG00000008156	si:ch1073-335m2.2	99	75.130	Gadus_morhua
ENSXMAG00000021384	-	97	89.130	ENSGMOG00000008397	-	99	89.560	Gadus_morhua
ENSXMAG00000021384	-	90	72.075	ENSGALG00000036932	SPEN	99	46.901	Gallus_gallus
ENSXMAG00000021384	-	100	97.336	ENSGAFG00000015819	-	100	97.336	Gambusia_affinis
ENSXMAG00000021384	-	97	81.287	ENSGAFG00000021570	si:ch1073-335m2.2	99	81.287	Gambusia_affinis
ENSXMAG00000021384	-	90	85.660	ENSGACG00000005341	-	100	71.056	Gasterosteus_aculeatus
ENSXMAG00000021384	-	91	69.349	ENSGACG00000001176	si:ch1073-335m2.2	97	79.070	Gasterosteus_aculeatus
ENSXMAG00000021384	-	90	72.075	ENSGAGG00000020785	SPEN	100	47.320	Gopherus_agassizii
ENSXMAG00000021384	-	90	72.453	ENSGGOG00000012041	SPEN	85	48.649	Gorilla_gorilla
ENSXMAG00000021384	-	95	79.651	ENSHBUG00000023253	si:ch1073-335m2.2	99	82.840	Haplochromis_burtoni
ENSXMAG00000021384	-	87	94.382	ENSHBUG00000020626	-	100	76.548	Haplochromis_burtoni
ENSXMAG00000021384	-	90	72.556	ENSHGLG00000019259	SPEN	83	55.846	Heterocephalus_glaber_female
ENSXMAG00000021384	-	78	68.240	ENSHGLG00100019294	SPEN	75	55.355	Heterocephalus_glaber_male
ENSXMAG00000021384	-	90	78.210	ENSHCOG00000002791	-	90	78.210	Hippocampus_comes
ENSXMAG00000021384	-	93	80.315	ENSHCOG00000006004	si:ch1073-335m2.2	99	80.315	Hippocampus_comes
ENSXMAG00000021384	-	89	63.175	ENSIPUG00000021668	spen	100	52.106	Ictalurus_punctatus
ENSXMAG00000021384	-	95	59.684	ENSIPUG00000018212	si:ch1073-335m2.2	99	59.055	Ictalurus_punctatus
ENSXMAG00000021384	-	78	68.534	ENSSTOG00000021428	SPEN	97	44.166	Ictidomys_tridecemlineatus
ENSXMAG00000021384	-	90	72.830	ENSJJAG00000010882	Spen	98	45.893	Jaculus_jaculus
ENSXMAG00000021384	-	87	94.944	ENSKMAG00000003882	-	100	79.797	Kryptolebias_marmoratus
ENSXMAG00000021384	-	97	74.112	ENSKMAG00000021725	si:ch1073-335m2.2	99	81.657	Kryptolebias_marmoratus
ENSXMAG00000021384	-	97	81.657	ENSLBEG00000020855	si:ch1073-335m2.2	99	81.657	Labrus_bergylta
ENSXMAG00000021384	-	90	80.859	ENSLBEG00000019151	-	88	84.722	Labrus_bergylta
ENSXMAG00000021384	-	84	69.963	ENSLBEG00000019129	-	100	69.963	Labrus_bergylta
ENSXMAG00000021384	-	89	74.144	ENSLACG00000003258	SPEN	99	83.851	Latimeria_chalumnae
ENSXMAG00000021384	-	97	84.828	ENSLOCG00000007896	si:ch1073-335m2.2	97	84.828	Lepisosteus_oculatus
ENSXMAG00000021384	-	89	64.639	ENSLAFG00000004524	SPEN	97	43.713	Loxodonta_africana
ENSXMAG00000021384	-	90	72.453	ENSMFAG00000041974	SPEN	96	44.425	Macaca_fascicularis
ENSXMAG00000021384	-	90	72.453	ENSMMUG00000008026	SPEN	96	44.514	Macaca_mulatta
ENSXMAG00000021384	-	90	72.453	ENSMNEG00000042402	SPEN	96	44.499	Macaca_nemestrina
ENSXMAG00000021384	-	90	64.906	ENSMLEG00000039293	SPEN	96	43.850	Mandrillus_leucophaeus
ENSXMAG00000021384	-	90	86.641	ENSMAMG00000014536	-	87	94.413	Mastacembelus_armatus
ENSXMAG00000021384	-	97	83.234	ENSMAMG00000023870	si:ch1073-335m2.2	99	83.234	Mastacembelus_armatus
ENSXMAG00000021384	-	89	74.606	ENSMZEG00005021491	-	99	74.606	Maylandia_zebra
ENSXMAG00000021384	-	95	79.651	ENSMZEG00005011762	si:ch1073-335m2.2	99	82.840	Maylandia_zebra
ENSXMAG00000021384	-	90	72.075	ENSMGAG00000005180	-	85	89.683	Meleagris_gallopavo
ENSXMAG00000021384	-	90	72.830	ENSMAUG00000008318	Spen	93	51.301	Mesocricetus_auratus
ENSXMAG00000021384	-	90	72.075	ENSMICG00000030994	SPEN	86	47.598	Microcebus_murinus
ENSXMAG00000021384	-	90	72.830	ENSMOCG00000016083	Spen	97	43.436	Microtus_ochrogaster
ENSXMAG00000021384	-	90	90.234	ENSMMOG00000017059	-	89	93.923	Mola_mola
ENSXMAG00000021384	-	94	81.657	ENSMMOG00000021742	si:ch1073-335m2.2	98	81.657	Mola_mola
ENSXMAG00000021384	-	90	72.180	ENSMODG00000003411	SPEN	100	44.835	Monodelphis_domestica
ENSXMAG00000021384	-	85	95.506	ENSMALG00000008625	-	100	76.241	Monopterus_albus
ENSXMAG00000021384	-	90	72.453	MGP_CAROLIEiJ_G0026745	Spen	97	44.790	Mus_caroli
ENSXMAG00000021384	-	90	72.453	ENSMUSG00000040761	Spen	97	44.394	Mus_musculus
ENSXMAG00000021384	-	90	72.453	MGP_PahariEiJ_G0029076	Spen	97	44.444	Mus_pahari
ENSXMAG00000021384	-	90	72.453	MGP_SPRETEiJ_G0027724	Spen	97	44.930	Mus_spretus
ENSXMAG00000021384	-	65	64.467	ENSMPUG00000016317	SPEN	96	44.027	Mustela_putorius_furo
ENSXMAG00000021384	-	93	87.097	ENSMLUG00000010144	SPEN	93	87.097	Myotis_lucifugus
ENSXMAG00000021384	-	90	72.453	ENSNGAG00000000641	Spen	99	47.603	Nannospalax_galili
ENSXMAG00000021384	-	85	73.506	ENSNBRG00000022090	-	100	73.772	Neolamprologus_brichardi
ENSXMAG00000021384	-	95	80.233	ENSNBRG00000005733	si:ch1073-335m2.2	99	82.840	Neolamprologus_brichardi
ENSXMAG00000021384	-	81	69.167	ENSNLEG00000007652	SPEN	85	47.926	Nomascus_leucogenys
ENSXMAG00000021384	-	76	82.292	ENSMEUG00000002422	SPEN	90	82.292	Notamacropus_eugenii
ENSXMAG00000021384	-	80	69.620	ENSOPRG00000015800	SPEN	83	63.628	Ochotona_princeps
ENSXMAG00000021384	-	90	72.556	ENSODEG00000016644	SPEN	100	42.512	Octodon_degus
ENSXMAG00000021384	-	90	88.123	ENSONIG00000006573	-	99	86.409	Oreochromis_niloticus
ENSXMAG00000021384	-	80	67.647	ENSOANG00000004165	-	100	70.332	Ornithorhynchus_anatinus
ENSXMAG00000021384	-	90	58.427	ENSOCUG00000010840	SPEN	97	42.098	Oryctolagus_cuniculus
ENSXMAG00000021384	-	96	66.245	ENSORLG00000018414	si:ch1073-335m2.2	99	78.771	Oryzias_latipes
ENSXMAG00000021384	-	87	64.957	ENSORLG00000028894	-	100	64.989	Oryzias_latipes
ENSXMAG00000021384	-	96	66.245	ENSORLG00020009351	si:ch1073-335m2.2	99	78.771	Oryzias_latipes_hni
ENSXMAG00000021384	-	87	65.236	ENSORLG00020007735	-	100	65.236	Oryzias_latipes_hni
ENSXMAG00000021384	-	94	82.609	ENSORLG00015005537	si:ch1073-335m2.2	99	82.609	Oryzias_latipes_hsok
ENSXMAG00000021384	-	87	90.449	ENSORLG00015022085	-	100	67.513	Oryzias_latipes_hsok
ENSXMAG00000021384	-	100	67.014	ENSOMEG00000007639	-	100	66.845	Oryzias_melastigma
ENSXMAG00000021384	-	96	82.822	ENSOMEG00000004509	si:ch1073-335m2.2	99	81.176	Oryzias_melastigma
ENSXMAG00000021384	-	90	72.453	ENSOGAG00000025110	SPEN	96	44.355	Otolemur_garnettii
ENSXMAG00000021384	-	87	66.667	ENSOARG00000008477	SPEN	96	44.313	Ovis_aries
ENSXMAG00000021384	-	81	68.750	ENSPPAG00000035690	SPEN	85	48.254	Pan_paniscus
ENSXMAG00000021384	-	90	72.453	ENSPTRG00000000210	SPEN	85	48.441	Pan_troglodytes
ENSXMAG00000021384	-	90	72.453	ENSPANG00000006293	SPEN	96	43.912	Papio_anubis
ENSXMAG00000021384	-	89	79.151	ENSPKIG00000002617	SPEN	90	85.083	Paramormyrops_kingsleyae
ENSXMAG00000021384	-	97	100.000	ENSPKIG00000010492	si:ch1073-335m2.2	100	100.000	Paramormyrops_kingsleyae
ENSXMAG00000021384	-	80	68.908	ENSPSIG00000008026	SPEN	100	45.452	Pelodiscus_sinensis
ENSXMAG00000021384	-	89	64.259	ENSPEMG00000022997	Spen	97	43.983	Peromyscus_maniculatus_bairdii
ENSXMAG00000021384	-	99	93.750	ENSPFOG00000024806	-	99	90.436	Poecilia_formosa
ENSXMAG00000021384	-	91	69.732	ENSPFOG00000017986	si:ch1073-335m2.2	98	82.249	Poecilia_formosa
ENSXMAG00000021384	-	100	96.491	ENSPLAG00000001398	-	100	99.699	Poecilia_latipinna
ENSXMAG00000021384	-	97	74.619	ENSPLAG00000016625	si:ch1073-335m2.2	98	82.249	Poecilia_latipinna
ENSXMAG00000021384	-	100	96.967	ENSPMEG00000006764	-	100	96.967	Poecilia_mexicana
ENSXMAG00000021384	-	91	69.732	ENSPMEG00000002674	si:ch1073-335m2.2	98	82.249	Poecilia_mexicana
ENSXMAG00000021384	-	75	69.266	ENSPREG00000005357	si:ch1073-335m2.2	99	82.249	Poecilia_reticulata
ENSXMAG00000021384	-	100	96.882	ENSPREG00000010399	-	100	96.882	Poecilia_reticulata
ENSXMAG00000021384	-	90	72.453	ENSPPYG00000001834	SPEN	89	48.150	Pongo_abelii
ENSXMAG00000021384	-	89	61.484	ENSPCAG00000009543	SPEN	88	60.424	Procavia_capensis
ENSXMAG00000021384	-	90	71.698	ENSPCOG00000021735	SPEN	87	46.843	Propithecus_coquereli
ENSXMAG00000021384	-	90	72.075	ENSPVAG00000013794	SPEN	71	62.425	Pteropus_vampyrus
ENSXMAG00000021384	-	95	79.651	ENSPNYG00000009042	si:ch1073-335m2.2	99	82.840	Pundamilia_nyererei
ENSXMAG00000021384	-	87	94.382	ENSPNYG00000012379	-	100	76.605	Pundamilia_nyererei
ENSXMAG00000021384	-	98	71.635	ENSPNAG00000011452	si:ch1073-335m2.2	99	79.775	Pygocentrus_nattereri
ENSXMAG00000021384	-	87	85.876	ENSPNAG00000020795	spen	87	78.626	Pygocentrus_nattereri
ENSXMAG00000021384	-	80	69.328	ENSRNOG00000033556	Spen	97	44.330	Rattus_norvegicus
ENSXMAG00000021384	-	89	66.031	ENSRBIG00000039654	SPEN	96	43.631	Rhinopithecus_bieti
ENSXMAG00000021384	-	81	69.167	ENSRROG00000035686	SPEN	96	43.620	Rhinopithecus_roxellana
ENSXMAG00000021384	-	81	69.167	ENSSBOG00000028770	SPEN	85	48.364	Saimiri_boliviensis_boliviensis
ENSXMAG00000021384	-	82	67.755	ENSSHAG00000004960	SPEN	99	70.415	Sarcophilus_harrisii
ENSXMAG00000021384	-	89	66.887	ENSSFOG00015010267	si:ch1073-335m2.2	100	53.733	Scleropages_formosus
ENSXMAG00000021384	-	86	66.667	ENSSFOG00015007131	si:ch1073-335m2.2	100	53.333	Scleropages_formosus
ENSXMAG00000021384	-	100	75.598	ENSSMAG00000008996	-	100	75.598	Scophthalmus_maximus
ENSXMAG00000021384	-	91	69.847	ENSSMAG00000000125	si:ch1073-335m2.2	99	82.249	Scophthalmus_maximus
ENSXMAG00000021384	-	90	89.695	ENSSDUG00000003476	-	96	97.207	Seriola_dumerili
ENSXMAG00000021384	-	98	68.610	ENSSDUG00000008416	si:ch1073-335m2.2	99	82.840	Seriola_dumerili
ENSXMAG00000021384	-	99	96.277	ENSSLDG00000012950	-	96	97.207	Seriola_lalandi_dorsalis
ENSXMAG00000021384	-	87	43.223	ENSSPUG00000001866	-	100	43.076	Sphenodon_punctatus
ENSXMAG00000021384	-	87	95.506	ENSSPAG00000006014	-	89	95.028	Stegastes_partitus
ENSXMAG00000021384	-	97	83.432	ENSSPAG00000012454	si:ch1073-335m2.2	99	83.432	Stegastes_partitus
ENSXMAG00000021384	-	90	72.453	ENSSSCG00000034484	SPEN	84	47.729	Sus_scrofa
ENSXMAG00000021384	-	62	60.938	ENSTRUG00000021008	si:ch1073-335m2.2	100	77.348	Takifugu_rubripes
ENSXMAG00000021384	-	100	70.525	ENSTRUG00000024350	-	100	70.469	Takifugu_rubripes
ENSXMAG00000021384	-	96	85.092	ENSTNIG00000010907	-	100	85.092	Tetraodon_nigroviridis
ENSXMAG00000021384	-	91	69.349	ENSTNIG00000014666	si:ch1073-335m2.2	78	79.651	Tetraodon_nigroviridis
ENSXMAG00000021384	-	60	77.181	ENSTBEG00000003628	SPEN	68	80.328	Tupaia_belangeri
ENSXMAG00000021384	-	80	69.198	ENSTTRG00000015704	SPEN	67	80.328	Tursiops_truncatus
ENSXMAG00000021384	-	90	72.453	ENSUAMG00000009600	SPEN	96	45.097	Ursus_americanus
ENSXMAG00000021384	-	82	68.033	ENSUMAG00000021641	SPEN	96	44.000	Ursus_maritimus
ENSXMAG00000021384	-	91	100.000	ENSVVUG00000028951	SPEN	95	100.000	Vulpes_vulpes
ENSXMAG00000021384	-	90	70.455	ENSXETG00000023114	SPEN	100	41.888	Xenopus_tropicalis
ENSXMAG00000021384	-	97	74.359	ENSXCOG00000004516	si:ch1073-335m2.2	99	81.287	Xiphophorus_couchianus
ENSXMAG00000021384	-	97	74.619	ENSXMAG00000029887	si:ch1073-335m2.2	99	81.287	Xiphophorus_maculatus