EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000021388 (Gene tree)
Gene ID: 106699729
Gene Symbol: si:ch211-153b23.4
Alias: fj08f03|fj10b02|im:7041150|wu:fj08f03|wu:fj10b02
Full Name: uncharacterized LOC106699729
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 6707 bases
Position: chr23:19641276-19647982
Accession: 106699729
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000041277	Sua5_yciO_yrdC	PF01300.18	2.4e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000025647	-	4852	XM_023328626	ENSXMAP00000041277	834 (aa)	XP_023184394	UPI000C6E0B9A

Gene Model

Click here to download ENSXMAG00000021388's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000021388's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000021388	si:ch211-153b23.4	95	82.532	ENSAPOG00000006144	si:ch211-153b23.4	90	83.700	Acanthochromis_polyacanthus
ENSXMAG00000021388	si:ch211-153b23.4	100	80.336	ENSAPOG00000006178	si:ch211-153b23.4	90	83.784	Acanthochromis_polyacanthus
ENSXMAG00000021388	si:ch211-153b23.4	96	84.769	ENSACIG00000006997	si:ch211-153b23.4	94	84.769	Amphilophus_citrinellus
ENSXMAG00000021388	si:ch211-153b23.4	62	32.453	ENSAOCG00000010974	si:ch211-153b23.3	59	32.453	Amphiprion_ocellaris
ENSXMAG00000021388	si:ch211-153b23.4	94	78.981	ENSAOCG00000010999	si:ch211-153b23.4	95	78.981	Amphiprion_ocellaris
ENSXMAG00000021388	si:ch211-153b23.4	97	80.099	ENSAPEG00000014665	si:ch211-153b23.4	95	80.099	Amphiprion_percula
ENSXMAG00000021388	si:ch211-153b23.4	62	31.579	ENSAPEG00000014700	si:ch211-153b23.3	59	31.579	Amphiprion_percula
ENSXMAG00000021388	si:ch211-153b23.4	100	82.734	ENSATEG00000004948	si:ch211-153b23.4	95	82.734	Anabas_testudineus
ENSXMAG00000021388	si:ch211-153b23.4	98	59.562	ENSAPLG00000013596	-	96	59.675	Anas_platyrhynchos
ENSXMAG00000021388	si:ch211-153b23.4	100	81.175	ENSACLG00000005471	si:ch211-153b23.4	94	81.175	Astatotilapia_calliptera
ENSXMAG00000021388	si:ch211-153b23.4	62	32.453	ENSACLG00000005894	si:ch211-153b23.3	59	32.008	Astatotilapia_calliptera
ENSXMAG00000021388	si:ch211-153b23.4	77	31.634	ENSAMXG00000038564	si:ch211-153b23.3	74	31.634	Astyanax_mexicanus
ENSXMAG00000021388	si:ch211-153b23.4	97	72.448	ENSAMXG00000013879	si:ch211-153b23.4	95	72.277	Astyanax_mexicanus
ENSXMAG00000021388	si:ch211-153b23.4	62	33.712	ENSCSEG00000014853	si:ch211-153b23.3	58	33.712	Cynoglossus_semilaevis
ENSXMAG00000021388	si:ch211-153b23.4	99	78.700	ENSCSEG00000014838	si:ch211-153b23.4	99	78.700	Cynoglossus_semilaevis
ENSXMAG00000021388	si:ch211-153b23.4	97	91.347	ENSCVAG00000021145	si:ch211-153b23.4	99	91.294	Cyprinodon_variegatus
ENSXMAG00000021388	si:ch211-153b23.4	77	31.744	ENSDARG00000104919	si:ch211-153b23.3	74	31.744	Danio_rerio
ENSXMAG00000021388	si:ch211-153b23.4	99	69.065	ENSDARG00000077169	si:ch211-153b23.4	95	69.065	Danio_rerio
ENSXMAG00000021388	si:ch211-153b23.4	99	70.913	ENSELUG00000004961	si:ch211-153b23.4	91	70.988	Esox_lucius
ENSXMAG00000021388	si:ch211-153b23.4	98	56.916	ENSFALG00000011343	-	91	57.465	Ficedula_albicollis
ENSXMAG00000021388	si:ch211-153b23.4	96	90.886	ENSFHEG00000010001	si:ch211-153b23.4	99	90.829	Fundulus_heteroclitus
ENSXMAG00000021388	si:ch211-153b23.4	85	95.522	ENSFHEG00000009888	si:ch211-153b23.4	79	95.522	Fundulus_heteroclitus
ENSXMAG00000021388	si:ch211-153b23.4	62	34.026	ENSGAFG00000007455	si:ch211-153b23.3	59	34.026	Gambusia_affinis
ENSXMAG00000021388	si:ch211-153b23.4	93	96.770	ENSGAFG00000007442	si:ch211-153b23.4	93	96.770	Gambusia_affinis
ENSXMAG00000021388	si:ch211-153b23.4	99	79.928	ENSGACG00000018253	si:ch211-153b23.4	95	80.198	Gasterosteus_aculeatus
ENSXMAG00000021388	si:ch211-153b23.4	83	64.040	ENSGAGG00000024601	-	93	64.040	Gopherus_agassizii
ENSXMAG00000021388	si:ch211-153b23.4	62	32.765	ENSHBUG00000001760	si:ch211-153b23.3	59	32.008	Haplochromis_burtoni
ENSXMAG00000021388	si:ch211-153b23.4	81	81.157	ENSHBUG00000000013	si:ch211-153b23.4	89	81.157	Haplochromis_burtoni
ENSXMAG00000021388	si:ch211-153b23.4	99	71.411	ENSIPUG00000015205	si:ch211-153b23.4	96	71.358	Ictalurus_punctatus
ENSXMAG00000021388	si:ch211-153b23.4	74	30.612	ENSIPUG00000015213	si:ch211-153b23.3	72	30.612	Ictalurus_punctatus
ENSXMAG00000021388	si:ch211-153b23.4	98	86.748	ENSKMAG00000006829	si:ch211-153b23.4	100	86.748	Kryptolebias_marmoratus
ENSXMAG00000021388	si:ch211-153b23.4	77	30.253	ENSKMAG00000006792	si:ch211-153b23.3	74	30.253	Kryptolebias_marmoratus
ENSXMAG00000021388	si:ch211-153b23.4	99	86.435	ENSKMAG00000006919	-	95	86.435	Kryptolebias_marmoratus
ENSXMAG00000021388	si:ch211-153b23.4	62	32.122	ENSLBEG00000026324	si:ch211-153b23.3	56	32.122	Labrus_bergylta
ENSXMAG00000021388	si:ch211-153b23.4	99	81.588	ENSLBEG00000026309	si:ch211-153b23.4	95	81.588	Labrus_bergylta
ENSXMAG00000021388	si:ch211-153b23.4	98	63.337	ENSLACG00000017592	si:ch211-153b23.4	96	63.296	Latimeria_chalumnae
ENSXMAG00000021388	si:ch211-153b23.4	77	30.299	ENSLACG00000005800	-	79	30.299	Latimeria_chalumnae
ENSXMAG00000021388	si:ch211-153b23.4	97	84.882	ENSMAMG00000009277	si:ch211-153b23.4	97	84.882	Mastacembelus_armatus
ENSXMAG00000021388	si:ch211-153b23.4	98	84.540	ENSMAMG00000009358	si:ch211-153b23.4	99	84.444	Mastacembelus_armatus
ENSXMAG00000021388	si:ch211-153b23.4	62	32.252	ENSMAMG00000009328	si:ch211-153b23.3	58	32.061	Mastacembelus_armatus
ENSXMAG00000021388	si:ch211-153b23.4	62	32.576	ENSMZEG00005011450	si:ch211-153b23.3	59	31.818	Maylandia_zebra
ENSXMAG00000021388	si:ch211-153b23.4	98	81.227	ENSMZEG00005011433	si:ch211-153b23.4	99	81.111	Maylandia_zebra
ENSXMAG00000021388	si:ch211-153b23.4	98	59.756	ENSMGAG00000005478	-	97	59.875	Meleagris_gallopavo
ENSXMAG00000021388	si:ch211-153b23.4	97	81.211	ENSMMOG00000004425	si:ch211-153b23.4	99	81.095	Mola_mola
ENSXMAG00000021388	si:ch211-153b23.4	96	81.305	ENSNBRG00000013392	si:ch211-153b23.4	99	81.187	Neolamprologus_brichardi
ENSXMAG00000021388	si:ch211-153b23.4	62	32.959	ENSNBRG00000013370	si:ch211-153b23.3	59	32.519	Neolamprologus_brichardi
ENSXMAG00000021388	si:ch211-153b23.4	99	81.348	ENSONIG00000017875	si:ch211-153b23.4	95	81.348	Oreochromis_niloticus
ENSXMAG00000021388	si:ch211-153b23.4	99	81.829	ENSORLG00000006169	si:ch211-153b23.4	95	81.829	Oryzias_latipes
ENSXMAG00000021388	si:ch211-153b23.4	99	82.190	ENSORLG00020009905	si:ch211-153b23.4	95	82.190	Oryzias_latipes_hni
ENSXMAG00000021388	si:ch211-153b23.4	99	81.949	ENSORLG00015003709	si:ch211-153b23.4	95	81.949	Oryzias_latipes_hsok
ENSXMAG00000021388	si:ch211-153b23.4	61	34.151	ENSOMEG00000007661	si:ch211-153b23.3	60	33.962	Oryzias_melastigma
ENSXMAG00000021388	si:ch211-153b23.4	100	81.415	ENSOMEG00000007682	si:ch211-153b23.4	95	81.415	Oryzias_melastigma
ENSXMAG00000021388	si:ch211-153b23.4	99	66.707	ENSPKIG00000014429	si:ch211-153b23.4	96	66.790	Paramormyrops_kingsleyae
ENSXMAG00000021388	si:ch211-153b23.4	99	70.723	ENSPKIG00000025681	si:ch211-153b23.4	96	70.723	Paramormyrops_kingsleyae
ENSXMAG00000021388	si:ch211-153b23.4	58	33.266	ENSPKIG00000022450	si:ch211-153b23.3	56	33.065	Paramormyrops_kingsleyae
ENSXMAG00000021388	si:ch211-153b23.4	95	64.205	ENSPMGG00000001313	si:ch211-153b23.4	86	64.903	Periophthalmus_magnuspinnatus
ENSXMAG00000021388	si:ch211-153b23.4	62	34.026	ENSPFOG00000012289	si:ch211-153b23.3	59	34.026	Poecilia_formosa
ENSXMAG00000021388	si:ch211-153b23.4	82	95.742	ENSPFOG00000012164	si:ch211-153b23.4	95	95.742	Poecilia_formosa
ENSXMAG00000021388	si:ch211-153b23.4	96	95.647	ENSPLAG00000016295	si:ch211-153b23.4	99	95.647	Poecilia_latipinna
ENSXMAG00000021388	si:ch211-153b23.4	62	33.397	ENSPLAG00000016320	si:ch211-153b23.3	59	33.397	Poecilia_latipinna
ENSXMAG00000021388	si:ch211-153b23.4	62	33.837	ENSPMEG00000008884	si:ch211-153b23.3	59	33.837	Poecilia_mexicana
ENSXMAG00000021388	si:ch211-153b23.4	94	94.246	ENSPMEG00000007538	si:ch211-153b23.4	95	94.246	Poecilia_mexicana
ENSXMAG00000021388	si:ch211-153b23.4	98	80.982	ENSPNYG00000000250	si:ch211-153b23.4	99	80.864	Pundamilia_nyererei
ENSXMAG00000021388	si:ch211-153b23.4	62	32.453	ENSPNYG00000000251	si:ch211-153b23.3	59	32.008	Pundamilia_nyererei
ENSXMAG00000021388	si:ch211-153b23.4	99	72.530	ENSPNAG00000019554	si:ch211-153b23.4	92	72.716	Pygocentrus_nattereri
ENSXMAG00000021388	si:ch211-153b23.4	74	31.250	ENSPNAG00000019592	si:ch211-153b23.3	71	31.250	Pygocentrus_nattereri
ENSXMAG00000021388	si:ch211-153b23.4	99	67.616	ENSSFOG00015003920	-	93	67.844	Scleropages_formosus
ENSXMAG00000021388	si:ch211-153b23.4	99	71.823	ENSSFOG00015010891	si:ch211-153b23.4	96	71.823	Scleropages_formosus
ENSXMAG00000021388	si:ch211-153b23.4	62	33.396	ENSSFOG00015010910	si:ch211-153b23.3	60	33.271	Scleropages_formosus
ENSXMAG00000021388	si:ch211-153b23.4	100	81.415	ENSSMAG00000010067	si:ch211-153b23.4	96	81.415	Scophthalmus_maximus
ENSXMAG00000021388	si:ch211-153b23.4	62	32.887	ENSSMAG00000005446	si:ch211-153b23.3	58	32.887	Scophthalmus_maximus
ENSXMAG00000021388	si:ch211-153b23.4	81	81.994	ENSSDUG00000006931	si:ch211-153b23.4	92	81.994	Seriola_dumerili
ENSXMAG00000021388	si:ch211-153b23.4	97	83.066	ENSSDUG00000006671	si:ch211-153b23.4	99	82.960	Seriola_dumerili
ENSXMAG00000021388	si:ch211-153b23.4	87	83.764	ENSSDUG00000006842	si:ch211-153b23.4	92	81.919	Seriola_dumerili
ENSXMAG00000021388	si:ch211-153b23.4	98	59.658	ENSTGUG00000005499	-	97	59.900	Taeniopygia_guttata
ENSXMAG00000021388	si:ch211-153b23.4	61	33.333	ENSTRUG00000020530	si:ch211-153b23.3	59	33.902	Takifugu_rubripes
ENSXMAG00000021388	si:ch211-153b23.4	97	78.960	ENSTRUG00000003247	si:ch211-153b23.4	99	78.829	Takifugu_rubripes
ENSXMAG00000021388	si:ch211-153b23.4	62	31.048	ENSTNIG00000008962	si:ch211-153b23.3	56	30.077	Tetraodon_nigroviridis
ENSXMAG00000021388	si:ch211-153b23.4	99	77.549	ENSTNIG00000008958	si:ch211-153b23.4	99	77.549	Tetraodon_nigroviridis
ENSXMAG00000021388	si:ch211-153b23.4	99	55.047	ENSXETG00000004489	-	91	55.409	Xenopus_tropicalis
ENSXMAG00000021388	si:ch211-153b23.4	97	97.525	ENSXMAG00000009416	-	95	97.525	Xiphophorus_maculatus
ENSXMAG00000021388	si:ch211-153b23.4	62	33.710	ENSXMAG00000029318	si:ch211-153b23.3	59	33.710	Xiphophorus_maculatus