EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000021429 (Gene tree)
Gene ID: 102231331
Gene Symbol: -
Alias: -
Full Name: mediator of DNA damage checkpoint protein 1
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 13632 bases
Position: chr1:31713481-31727112
Accession: 102231331
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000037848	MBD	PF01429.19	5.2e-13	1	1
ENSXMAP00000037486	MBD	PF01429.19	5.2e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000029355	-	7255	XM_023333949	ENSXMAP00000037848	1166 (aa)	XP_023189717	UPI000C6CC01A
ENSXMAT00000021733	-	6641	XM_023333967	ENSXMAP00000037486	1180 (aa)	XP_023189735	-

Gene Model

Click here to download ENSXMAG00000021429's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000021429's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000021429	-	72	74.091	ENSAOCG00000011591	-	100	56.583	Amphiprion_ocellaris
ENSXMAG00000021429	-	98	59.734	ENSATEG00000019486	mecp2	96	83.721	Anabas_testudineus
ENSXMAG00000021429	-	100	59.230	ENSACLG00000013679	-	100	57.516	Astatotilapia_calliptera
ENSXMAG00000021429	-	100	46.361	ENSCSEG00000017325	-	100	46.688	Cynoglossus_semilaevis
ENSXMAG00000021429	-	81	73.566	ENSCVAG00000001916	-	82	72.113	Cyprinodon_variegatus
ENSXMAG00000021429	-	82	75.839	ENSFHEG00000017782	-	100	75.854	Fundulus_heteroclitus
ENSXMAG00000021429	-	62	92.995	ENSGAFG00000020090	mecp2	100	91.940	Gambusia_affinis
ENSXMAG00000021429	-	86	53.451	ENSHCOG00000015950	mecp2	98	55.852	Hippocampus_comes
ENSXMAG00000021429	-	100	67.692	ENSKMAG00000014971	-	100	58.431	Kryptolebias_marmoratus
ENSXMAG00000021429	-	99	58.817	ENSLBEG00000012591	-	100	58.885	Labrus_bergylta
ENSXMAG00000021429	-	100	60.155	ENSMAMG00000011796	mecp2	100	60.066	Mastacembelus_armatus
ENSXMAG00000021429	-	100	58.910	ENSMZEG00005026761	-	100	57.218	Maylandia_zebra
ENSXMAG00000021429	-	87	69.412	ENSMMOG00000009875	mecp2	99	54.397	Mola_mola
ENSXMAG00000021429	-	100	52.813	ENSORLG00000028917	-	100	51.171	Oryzias_latipes
ENSXMAG00000021429	-	100	52.558	ENSORLG00020003394	-	100	50.392	Oryzias_latipes_hni
ENSXMAG00000021429	-	100	52.326	ENSORLG00015017697	-	100	50.677	Oryzias_latipes_hsok
ENSXMAG00000021429	-	100	53.061	ENSOMEG00000011209	-	100	51.559	Oryzias_melastigma
ENSXMAG00000021429	-	54	91.927	ENSPFOG00000002307	mecp2	98	92.000	Poecilia_formosa
ENSXMAG00000021429	-	100	90.012	ENSPLAG00000013943	mecp2	100	89.388	Poecilia_latipinna
ENSXMAG00000021429	-	99	90.464	ENSPMEG00000006101	mecp2	100	86.407	Poecilia_mexicana
ENSXMAG00000021429	-	100	85.900	ENSPREG00000012585	mecp2	100	87.113	Poecilia_reticulata
ENSXMAG00000021429	-	100	59.230	ENSPNYG00000020387	-	100	57.516	Pundamilia_nyererei
ENSXMAG00000021429	-	98	58.443	ENSSMAG00000012458	-	100	58.084	Scophthalmus_maximus
ENSXMAG00000021429	-	98	61.446	ENSSDUG00000019809	mecp2	100	59.175	Seriola_dumerili
ENSXMAG00000021429	-	98	61.325	ENSSLDG00000006333	mecp2	100	59.175	Seriola_lalandi_dorsalis
ENSXMAG00000021429	-	66	71.364	ENSSPAG00000005289	mecp2	100	58.068	Stegastes_partitus