EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000021533 (Gene tree)
Gene ID: 102228433
Gene Symbol: LARP4B
Alias: KIAA0217|LARP5
Full Name: La ribonucleoprotein domain family member 4B
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 38280 bases
Position: chr6:27511281-27549560
Accession: 102228433
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000026124	La	PF05383.17	1.4e-13	1	1
ENSXMAP00000032440	La	PF05383.17	1.6e-13	1	1
ENSXMAP00000025517	La	PF05383.17	1.7e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000028356	LARP4B-202	6522	XM_023335429	ENSXMAP00000026124	704 (aa)	XP_023191197	UPI000C6CEF24
ENSXMAT00000037392	LARP4B-203	5940	-	ENSXMAP00000025517	787 (aa)	-	-
ENSXMAT00000034919	LARP4B-201	6696	XM_023335428	ENSXMAP00000032440	762 (aa)	XP_023191196	UPI000C6CE448

Gene Model

Click here to download ENSXMAG00000021533's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000021533's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000021533	LARP4B	100	55.486	ENSG00000107929	LARP4B	100	55.125	Homo_sapiens
ENSXMAG00000021533	LARP4B	100	74.014	ENSAPOG00000020531	LARP4B	94	86.121	Acanthochromis_polyacanthus
ENSXMAG00000021533	LARP4B	100	53.500	ENSAMEG00000001810	LARP4B	100	53.325	Ailuropoda_melanoleuca
ENSXMAG00000021533	LARP4B	98	70.636	ENSAOCG00000007887	-	99	86.477	Amphiprion_ocellaris
ENSXMAG00000021533	LARP4B	94	83.750	ENSAPEG00000002512	LARP4B	96	82.234	Amphiprion_percula
ENSXMAG00000021533	LARP4B	100	80.460	ENSATEG00000012614	LARP4B	100	80.843	Anabas_testudineus
ENSXMAG00000021533	LARP4B	100	58.323	ENSAPLG00000003813	LARP4B	98	57.610	Anas_platyrhynchos
ENSXMAG00000021533	LARP4B	100	59.126	ENSACAG00000002858	LARP4B	100	58.301	Anolis_carolinensis
ENSXMAG00000021533	LARP4B	100	55.542	ENSANAG00000007531	-	100	54.750	Aotus_nancymaae
ENSXMAG00000021533	LARP4B	100	82.573	ENSACLG00000026356	LARP4B	100	83.978	Astatotilapia_calliptera
ENSXMAG00000021533	LARP4B	94	52.925	ENSAMXG00000003335	larp4b	96	52.617	Astyanax_mexicanus
ENSXMAG00000021533	LARP4B	100	53.690	ENSBTAG00000013899	LARP4B	100	54.974	Bos_taurus
ENSXMAG00000021533	LARP4B	100	55.625	ENSCJAG00000018434	LARP4B	100	54.750	Callithrix_jacchus
ENSXMAG00000021533	LARP4B	92	56.445	ENSCAFG00020004209	LARP4B	100	54.261	Canis_lupus_dingo
ENSXMAG00000021533	LARP4B	97	53.786	ENSCHIG00000013543	LARP4B	98	53.665	Capra_hircus
ENSXMAG00000021533	LARP4B	88	60.377	ENSTSYG00000002568	LARP4B	99	60.095	Carlito_syrichta
ENSXMAG00000021533	LARP4B	96	52.890	ENSCAPG00000009725	LARP4B	90	52.746	Cavia_aperea
ENSXMAG00000021533	LARP4B	100	55.514	ENSCPOG00000009375	LARP4B	100	55.388	Cavia_porcellus
ENSXMAG00000021533	LARP4B	100	55.293	ENSCCAG00000024869	LARP4B	100	54.750	Cebus_capucinus
ENSXMAG00000021533	LARP4B	100	55.791	ENSCATG00000019750	LARP4B	100	55.250	Cercocebus_atys
ENSXMAG00000021533	LARP4B	100	56.122	ENSCLAG00000011570	LARP4B	100	55.882	Chinchilla_lanigera
ENSXMAG00000021533	LARP4B	70	78.788	ENSCHOG00000007831	-	56	78.788	Choloepus_hoffmanni
ENSXMAG00000021533	LARP4B	100	58.590	ENSCPBG00000017063	LARP4B	100	58.687	Chrysemys_picta_bellii
ENSXMAG00000021533	LARP4B	100	53.923	ENSCANG00000038021	LARP4B	100	53.375	Colobus_angolensis_palliatus
ENSXMAG00000021533	LARP4B	98	56.430	ENSCGRG00001022930	Larp4b	100	59.689	Cricetulus_griseus_chok1gshd
ENSXMAG00000021533	LARP4B	98	56.430	ENSCGRG00000006022	Larp4b	100	59.689	Cricetulus_griseus_crigri
ENSXMAG00000021533	LARP4B	100	72.702	ENSCSEG00000007342	LARP4B	100	72.981	Cynoglossus_semilaevis
ENSXMAG00000021533	LARP4B	100	86.732	ENSCVAG00000008910	LARP4B	100	87.849	Cyprinodon_variegatus
ENSXMAG00000021533	LARP4B	95	52.625	ENSDARG00000062146	larp4b	99	52.048	Danio_rerio
ENSXMAG00000021533	LARP4B	96	54.920	ENSDNOG00000045543	-	100	61.702	Dasypus_novemcinctus
ENSXMAG00000021533	LARP4B	100	52.513	ENSDORG00000009328	Larp4b	100	56.402	Dipodomys_ordii
ENSXMAG00000021533	LARP4B	88	57.183	ENSETEG00000011249	LARP4B	91	56.863	Echinops_telfairi
ENSXMAG00000021533	LARP4B	91	56.267	ENSEASG00005019068	-	100	54.443	Equus_asinus_asinus
ENSXMAG00000021533	LARP4B	91	56.540	ENSECAG00000024040	LARP4B	100	54.693	Equus_caballus
ENSXMAG00000021533	LARP4B	92	54.558	ENSEEUG00000008391	LARP4B	98	53.491	Erinaceus_europaeus
ENSXMAG00000021533	LARP4B	90	41.797	ENSELUG00000001417	-	96	41.854	Esox_lucius
ENSXMAG00000021533	LARP4B	100	71.811	ENSELUG00000008626	LARP4B	100	71.811	Esox_lucius
ENSXMAG00000021533	LARP4B	92	56.988	ENSFCAG00000000721	-	100	55.056	Felis_catus
ENSXMAG00000021533	LARP4B	100	59.459	ENSFALG00000006961	LARP4B	100	58.656	Ficedula_albicollis
ENSXMAG00000021533	LARP4B	100	56.359	ENSFDAG00000006158	LARP4B	97	55.431	Fukomys_damarensis
ENSXMAG00000021533	LARP4B	100	70.779	ENSFHEG00000013037	LARP4B	100	71.169	Fundulus_heteroclitus
ENSXMAG00000021533	LARP4B	76	74.224	ENSGMOG00000010818	-	82	77.261	Gadus_morhua
ENSXMAG00000021533	LARP4B	100	58.643	ENSGALG00000006672	LARP4B	100	58.387	Gallus_gallus
ENSXMAG00000021533	LARP4B	100	72.325	ENSGACG00000017535	LARP4B	98	72.359	Gasterosteus_aculeatus
ENSXMAG00000021533	LARP4B	94	56.929	ENSGAGG00000008598	LARP4B	100	56.871	Gopherus_agassizii
ENSXMAG00000021533	LARP4B	100	55.611	ENSGGOG00000003572	LARP4B	100	55.250	Gorilla_gorilla
ENSXMAG00000021533	LARP4B	100	83.520	ENSHBUG00000007535	LARP4B	100	84.658	Haplochromis_burtoni
ENSXMAG00000021533	LARP4B	100	55.805	ENSHGLG00000012936	LARP4B	100	60.161	Heterocephalus_glaber_female
ENSXMAG00000021533	LARP4B	100	55.820	ENSHGLG00100016220	-	100	56.140	Heterocephalus_glaber_male
ENSXMAG00000021533	LARP4B	85	51.149	ENSHGLG00100017261	-	100	51.302	Heterocephalus_glaber_male
ENSXMAG00000021533	LARP4B	99	68.603	ENSHCOG00000011581	LARP4B	89	68.603	Hippocampus_comes
ENSXMAG00000021533	LARP4B	94	52.540	ENSIPUG00000009705	larp4b	98	52.139	Ictalurus_punctatus
ENSXMAG00000021533	LARP4B	100	53.625	ENSSTOG00000000587	LARP4B	95	61.486	Ictidomys_tridecemlineatus
ENSXMAG00000021533	LARP4B	100	55.266	ENSJJAG00000020847	Larp4b	100	54.647	Jaculus_jaculus
ENSXMAG00000021533	LARP4B	100	83.182	ENSKMAG00000021674	LARP4B	100	83.829	Kryptolebias_marmoratus
ENSXMAG00000021533	LARP4B	76	85.142	ENSLBEG00000025293	-	82	85.810	Labrus_bergylta
ENSXMAG00000021533	LARP4B	93	60.000	ENSLACG00000009492	LARP4B	100	57.572	Latimeria_chalumnae
ENSXMAG00000021533	LARP4B	100	64.322	ENSLOCG00000012290	larp4b	100	64.713	Lepisosteus_oculatus
ENSXMAG00000021533	LARP4B	100	54.624	ENSLAFG00000015334	LARP4B	100	54.863	Loxodonta_africana
ENSXMAG00000021533	LARP4B	100	55.791	ENSMFAG00000001766	LARP4B	100	53.375	Macaca_fascicularis
ENSXMAG00000021533	LARP4B	100	55.791	ENSMMUG00000005279	LARP4B	100	55.250	Macaca_mulatta
ENSXMAG00000021533	LARP4B	100	55.666	ENSMNEG00000014019	LARP4B	100	53.250	Macaca_nemestrina
ENSXMAG00000021533	LARP4B	100	55.846	ENSMLEG00000035198	LARP4B	100	55.181	Mandrillus_leucophaeus
ENSXMAG00000021533	LARP4B	100	81.314	ENSMAMG00000013742	LARP4B	100	81.443	Mastacembelus_armatus
ENSXMAG00000021533	LARP4B	94	81.893	ENSMZEG00005014594	-	100	83.288	Maylandia_zebra
ENSXMAG00000021533	LARP4B	100	72.115	ENSMZEG00005006498	-	95	89.572	Maylandia_zebra
ENSXMAG00000021533	LARP4B	100	55.514	ENSMGAG00000005472	LARP4B	100	55.388	Meleagris_gallopavo
ENSXMAG00000021533	LARP4B	100	55.473	ENSMAUG00000021657	Larp4b	100	59.325	Mesocricetus_auratus
ENSXMAG00000021533	LARP4B	100	55.614	ENSMICG00000001301	LARP4B	100	55.482	Microcebus_murinus
ENSXMAG00000021533	LARP4B	94	57.035	ENSMOCG00000021452	Larp4b	100	59.003	Microtus_ochrogaster
ENSXMAG00000021533	LARP4B	85	96.552	ENSMMOG00000011253	-	100	68.150	Mola_mola
ENSXMAG00000021533	LARP4B	100	56.450	ENSMODG00000005957	LARP4B	100	56.361	Monodelphis_domestica
ENSXMAG00000021533	LARP4B	100	69.405	ENSMALG00000012432	LARP4B	100	69.405	Monopterus_albus
ENSXMAG00000021533	LARP4B	100	54.750	MGP_CAROLIEiJ_G0018216	Larp4b	100	54.682	Mus_caroli
ENSXMAG00000021533	LARP4B	100	55.375	ENSMUSG00000033499	Larp4b	100	59.677	Mus_musculus
ENSXMAG00000021533	LARP4B	100	55.404	MGP_PahariEiJ_G0019266	Larp4b	100	59.774	Mus_pahari
ENSXMAG00000021533	LARP4B	100	55.250	MGP_SPRETEiJ_G0019074	Larp4b	100	59.839	Mus_spretus
ENSXMAG00000021533	LARP4B	92	55.995	ENSMPUG00000016220	LARP4B	97	54.078	Mustela_putorius_furo
ENSXMAG00000021533	LARP4B	88	56.047	ENSMLUG00000005880	LARP4B	99	54.094	Myotis_lucifugus
ENSXMAG00000021533	LARP4B	100	55.362	ENSNGAG00000001750	Larp4b	100	55.112	Nannospalax_galili
ENSXMAG00000021533	LARP4B	100	65.612	ENSNBRG00000020018	LARP4B	100	65.750	Neolamprologus_brichardi
ENSXMAG00000021533	LARP4B	100	55.417	ENSNLEG00000013442	LARP4B	100	54.875	Nomascus_leucogenys
ENSXMAG00000021533	LARP4B	83	47.126	ENSMEUG00000013114	-	83	47.677	Notamacropus_eugenii
ENSXMAG00000021533	LARP4B	100	53.342	ENSOPRG00000003300	LARP4B	100	52.045	Ochotona_princeps
ENSXMAG00000021533	LARP4B	100	52.065	ENSODEG00000001109	LARP4B	100	55.663	Octodon_degus
ENSXMAG00000021533	LARP4B	100	81.946	ENSONIG00000017705	LARP4B	100	82.971	Oreochromis_niloticus
ENSXMAG00000021533	LARP4B	100	55.446	ENSOANG00000006100	LARP4B	100	55.335	Ornithorhynchus_anatinus
ENSXMAG00000021533	LARP4B	100	53.155	ENSOCUG00000004950	LARP4B	97	52.848	Oryctolagus_cuniculus
ENSXMAG00000021533	LARP4B	100	81.014	ENSORLG00000006080	LARP4B	100	81.404	Oryzias_latipes
ENSXMAG00000021533	LARP4B	100	82.163	ENSORLG00020020940	LARP4B	100	82.444	Oryzias_latipes_hni
ENSXMAG00000021533	LARP4B	100	81.972	ENSORLG00015020608	LARP4B	100	82.394	Oryzias_latipes_hsok
ENSXMAG00000021533	LARP4B	100	80.309	ENSOMEG00000019619	LARP4B	100	80.450	Oryzias_melastigma
ENSXMAG00000021533	LARP4B	96	54.860	ENSOGAG00000011540	LARP4B	99	54.727	Otolemur_garnettii
ENSXMAG00000021533	LARP4B	97	53.576	ENSOARG00000015320	LARP4B	98	52.732	Ovis_aries
ENSXMAG00000021533	LARP4B	100	55.611	ENSPPAG00000039232	LARP4B	100	55.112	Pan_paniscus
ENSXMAG00000021533	LARP4B	92	56.988	ENSPPRG00000009489	LARP4B	100	54.931	Panthera_pardus
ENSXMAG00000021533	LARP4B	92	56.988	ENSPTIG00000008543	LARP4B	100	54.931	Panthera_tigris_altaica
ENSXMAG00000021533	LARP4B	100	55.611	ENSPTRG00000002235	LARP4B	100	55.112	Pan_troglodytes
ENSXMAG00000021533	LARP4B	100	55.791	ENSPANG00000023546	LARP4B	100	53.375	Papio_anubis
ENSXMAG00000021533	LARP4B	99	59.283	ENSPKIG00000012368	LARP4B	99	59.770	Paramormyrops_kingsleyae
ENSXMAG00000021533	LARP4B	72	67.077	ENSPSIG00000005600	LARP4B	99	67.077	Pelodiscus_sinensis
ENSXMAG00000021533	LARP4B	71	73.455	ENSPMGG00000008261	LARP4B	84	73.455	Periophthalmus_magnuspinnatus
ENSXMAG00000021533	LARP4B	100	54.432	ENSPEMG00000014052	Larp4b	100	54.432	Peromyscus_maniculatus_bairdii
ENSXMAG00000021533	LARP4B	100	95.990	ENSPFOG00000000029	LARP4B	100	95.990	Poecilia_formosa
ENSXMAG00000021533	LARP4B	100	96.248	ENSPLAG00000002871	LARP4B	100	96.248	Poecilia_latipinna
ENSXMAG00000021533	LARP4B	100	95.860	ENSPMEG00000016361	LARP4B	100	95.860	Poecilia_mexicana
ENSXMAG00000021533	LARP4B	100	55.237	ENSPPYG00000002035	LARP4B	97	54.806	Pongo_abelii
ENSXMAG00000021533	LARP4B	100	54.010	ENSPCOG00000014688	LARP4B	100	53.885	Propithecus_coquereli
ENSXMAG00000021533	LARP4B	88	55.660	ENSPVAG00000009784	LARP4B	82	55.906	Pteropus_vampyrus
ENSXMAG00000021533	LARP4B	100	82.296	ENSPNYG00000024252	LARP4B	100	83.425	Pundamilia_nyererei
ENSXMAG00000021533	LARP4B	94	53.672	ENSPNAG00000028956	larp4b	97	52.894	Pygocentrus_nattereri
ENSXMAG00000021533	LARP4B	99	55.013	ENSRNOG00000015888	Larp4b	100	54.819	Rattus_norvegicus
ENSXMAG00000021533	LARP4B	100	55.666	ENSRBIG00000033294	LARP4B	100	55.125	Rhinopithecus_bieti
ENSXMAG00000021533	LARP4B	100	55.791	ENSRROG00000033879	LARP4B	100	55.250	Rhinopithecus_roxellana
ENSXMAG00000021533	LARP4B	100	50.687	ENSSBOG00000021109	LARP4B	100	50.125	Saimiri_boliviensis_boliviensis
ENSXMAG00000021533	LARP4B	100	58.151	ENSSHAG00000013392	LARP4B	100	58.056	Sarcophilus_harrisii
ENSXMAG00000021533	LARP4B	92	62.050	ENSSFOG00015003256	LARP4B	93	59.466	Scleropages_formosus
ENSXMAG00000021533	LARP4B	84	100.000	ENSSMAG00000005982	-	99	100.000	Scophthalmus_maximus
ENSXMAG00000021533	LARP4B	100	83.961	ENSSDUG00000006704	LARP4B	100	84.387	Seriola_dumerili
ENSXMAG00000021533	LARP4B	100	72.778	ENSSLDG00000020660	LARP4B	97	82.857	Seriola_lalandi_dorsalis
ENSXMAG00000021533	LARP4B	69	87.755	ENSSARG00000001243	-	77	87.755	Sorex_araneus
ENSXMAG00000021533	LARP4B	100	62.917	ENSSPUG00000002102	-	100	62.917	Sphenodon_punctatus
ENSXMAG00000021533	LARP4B	100	60.417	ENSSPUG00000013734	-	100	63.333	Sphenodon_punctatus
ENSXMAG00000021533	LARP4B	86	93.103	ENSSPAG00000014628	LARP4B	92	93.103	Stegastes_partitus
ENSXMAG00000021533	LARP4B	100	54.534	ENSSSCG00000011162	LARP4B	97	60.000	Sus_scrofa
ENSXMAG00000021533	LARP4B	100	58.726	ENSTGUG00000000811	-	100	57.942	Taeniopygia_guttata
ENSXMAG00000021533	LARP4B	100	68.869	ENSTNIG00000004571	-	98	69.451	Tetraodon_nigroviridis
ENSXMAG00000021533	LARP4B	99	67.602	ENSTNIG00000007991	LARP4B	99	72.261	Tetraodon_nigroviridis
ENSXMAG00000021533	LARP4B	83	58.333	ENSTTRG00000011151	LARP4B	86	59.091	Tursiops_truncatus
ENSXMAG00000021533	LARP4B	86	56.894	ENSUAMG00000016461	LARP4B	95	56.332	Ursus_americanus
ENSXMAG00000021533	LARP4B	92	56.250	ENSUMAG00000016127	LARP4B	100	54.078	Ursus_maritimus
ENSXMAG00000021533	LARP4B	100	54.307	ENSVVUG00000008641	LARP4B	100	54.135	Vulpes_vulpes
ENSXMAG00000021533	LARP4B	98	59.580	ENSXETG00000016882	larp4b	98	59.396	Xenopus_tropicalis
ENSXMAG00000021533	LARP4B	100	81.233	ENSXCOG00000019952	LARP4B	100	81.258	Xiphophorus_couchianus