EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000021755 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 3732 bases
Position: chr13:24605713-24609444
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000028887	RVT_1	PF00078.27	1.9e-47	1	1
ENSXMAP00000028887	RNase_H	PF00075.24	1.2e-09	1	1
ENSXMAP00000028887	Exo_endo_phos	PF03372.23	1.6e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000037063	-	3732	-	ENSXMAP00000028887	1243 (aa)	-	-

Gene Model

Click here to download ENSXMAG00000021755's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000021755's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000021755	-	100	46.178	ENSAMXG00000043500	-	96	47.039	Astyanax_mexicanus
ENSXMAG00000021755	-	100	48.724	ENSDARG00000103436	BX548028.1	99	48.724	Danio_rerio
ENSXMAG00000021755	-	99	47.604	ENSDARG00000099201	BX908731.1	99	47.194	Danio_rerio
ENSXMAG00000021755	-	99	47.684	ENSDARG00000103037	CR848788.1	99	47.352	Danio_rerio
ENSXMAG00000021755	-	100	76.466	ENSKMAG00000003982	-	100	76.867	Kryptolebias_marmoratus
ENSXMAG00000021755	-	65	84.080	ENSKMAG00000021014	-	99	84.080	Kryptolebias_marmoratus
ENSXMAG00000021755	-	68	53.436	ENSKMAG00000012711	-	99	53.589	Kryptolebias_marmoratus
ENSXMAG00000021755	-	100	76.466	ENSKMAG00000004415	-	100	76.867	Kryptolebias_marmoratus
ENSXMAG00000021755	-	100	47.096	ENSORLG00000023592	-	99	47.096	Oryzias_latipes
ENSXMAG00000021755	-	100	47.096	ENSORLG00000026314	-	99	47.096	Oryzias_latipes
ENSXMAG00000021755	-	100	47.017	ENSORLG00000027174	-	99	47.017	Oryzias_latipes
ENSXMAG00000021755	-	100	47.059	ENSORLG00000024423	-	99	47.059	Oryzias_latipes
ENSXMAG00000021755	-	100	47.577	ENSORLG00020018543	-	99	47.577	Oryzias_latipes_hni
ENSXMAG00000021755	-	71	47.052	ENSORLG00020019901	-	99	47.098	Oryzias_latipes_hni
ENSXMAG00000021755	-	100	47.736	ENSORLG00020020238	-	99	47.736	Oryzias_latipes_hni
ENSXMAG00000021755	-	100	47.419	ENSORLG00020011427	-	99	47.419	Oryzias_latipes_hni
ENSXMAG00000021755	-	88	48.317	ENSORLG00015013792	-	99	48.317	Oryzias_latipes_hsok
ENSXMAG00000021755	-	85	47.561	ENSOMEG00000003836	-	98	47.561	Oryzias_melastigma
ENSXMAG00000021755	-	97	49.136	ENSPKIG00000019189	-	95	49.376	Paramormyrops_kingsleyae
ENSXMAG00000021755	-	63	58.958	ENSXMAG00000023377	-	100	58.726	Xiphophorus_maculatus
ENSXMAG00000021755	-	90	48.181	ENSXMAG00000022223	-	95	49.072	Xiphophorus_maculatus
ENSXMAG00000021755	-	64	57.855	ENSXMAG00000023126	-	99	57.572	Xiphophorus_maculatus
ENSXMAG00000021755	-	81	50.246	ENSXMAG00000029923	-	99	50.246	Xiphophorus_maculatus
ENSXMAG00000021755	-	100	100.000	ENSXMAG00000021070	-	100	100.000	Xiphophorus_maculatus
ENSXMAG00000021755	-	90	48.181	ENSXMAG00000026588	-	95	49.072	Xiphophorus_maculatus
ENSXMAG00000021755	-	90	48.181	ENSXMAG00000026248	-	95	49.072	Xiphophorus_maculatus
ENSXMAG00000021755	-	71	45.964	ENSXMAG00000024143	-	94	46.730	Xiphophorus_maculatus
ENSXMAG00000021755	-	61	44.605	ENSXMAG00000025430	-	99	44.782	Xiphophorus_maculatus
ENSXMAG00000021755	-	100	56.571	ENSXMAG00000021061	-	100	56.571	Xiphophorus_maculatus
ENSXMAG00000021755	-	69	52.710	ENSXMAG00000020874	-	95	52.710	Xiphophorus_maculatus
ENSXMAG00000021755	-	92	44.694	ENSXMAG00000029466	-	100	44.214	Xiphophorus_maculatus
ENSXMAG00000021755	-	81	50.737	ENSXMAG00000027130	-	99	50.737	Xiphophorus_maculatus
ENSXMAG00000021755	-	100	99.437	ENSXMAG00000028309	-	100	99.437	Xiphophorus_maculatus
ENSXMAG00000021755	-	81	50.393	ENSXMAG00000023078	-	99	50.393	Xiphophorus_maculatus