EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000021767 (Gene tree)
Gene ID: 102226755
Gene Symbol: si:dkey-16l2.16
Alias: -
Full Name: ras-related protein Rab-35-like
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 9013 bases
Position: chr16:1438637-1447649
Accession: 102226755
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000032280	MMR_HSR1	PF01926.23	5.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000039768	-	1260	XM_023349058	ENSXMAP00000032280	209 (aa)	XP_023204826	UPI000C6E7657

Gene Model

Click here to download ENSXMAG00000021767's gene model file

Pathways

Pathway ID	Pathway Name	Source
xma04144	Endocytosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000021767's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000021767	si:dkey-16l2.16	100	86.603	ENSAPOG00000008263	si:dkey-16l2.16	100	86.603	Acanthochromis_polyacanthus
ENSXMAG00000021767	si:dkey-16l2.16	100	88.038	ENSAOCG00000016825	si:dkey-16l2.16	100	88.038	Amphiprion_ocellaris
ENSXMAG00000021767	si:dkey-16l2.16	100	88.038	ENSAPEG00000006500	si:dkey-16l2.16	100	88.038	Amphiprion_percula
ENSXMAG00000021767	si:dkey-16l2.16	100	88.517	ENSATEG00000019238	si:dkey-16l2.16	100	88.517	Anabas_testudineus
ENSXMAG00000021767	si:dkey-16l2.16	100	88.517	ENSACLG00000018721	si:dkey-16l2.16	100	88.517	Astatotilapia_calliptera
ENSXMAG00000021767	si:dkey-16l2.16	100	87.560	ENSAMXG00000038243	si:dkey-16l2.16	94	96.610	Astyanax_mexicanus
ENSXMAG00000021767	si:dkey-16l2.16	56	96.610	ENSCSEG00000009988	si:dkey-16l2.16	90	96.610	Cynoglossus_semilaevis
ENSXMAG00000021767	si:dkey-16l2.16	100	91.866	ENSCVAG00000003537	si:dkey-16l2.16	100	91.866	Cyprinodon_variegatus
ENSXMAG00000021767	si:dkey-16l2.16	100	86.124	ENSDARG00000037967	si:dkey-16l2.16	99	94.915	Danio_rerio
ENSXMAG00000021767	si:dkey-16l2.16	99	81.731	ENSELUG00000023247	si:dkey-16l2.16	99	81.731	Esox_lucius
ENSXMAG00000021767	si:dkey-16l2.16	58	94.215	ENSFHEG00000000767	si:dkey-16l2.16	78	94.215	Fundulus_heteroclitus
ENSXMAG00000021767	si:dkey-16l2.16	77	83.851	ENSGMOG00000015174	si:dkey-16l2.16	98	83.851	Gadus_morhua
ENSXMAG00000021767	si:dkey-16l2.16	100	99.522	ENSGAFG00000005388	si:dkey-16l2.16	100	99.522	Gambusia_affinis
ENSXMAG00000021767	si:dkey-16l2.16	100	86.603	ENSGACG00000014915	si:dkey-16l2.16	98	86.603	Gasterosteus_aculeatus
ENSXMAG00000021767	si:dkey-16l2.16	100	88.995	ENSHBUG00000019261	si:dkey-16l2.16	100	88.995	Haplochromis_burtoni
ENSXMAG00000021767	si:dkey-16l2.16	100	87.560	ENSHCOG00000006538	si:dkey-16l2.16	100	87.560	Hippocampus_comes
ENSXMAG00000021767	si:dkey-16l2.16	100	87.081	ENSKMAG00000003494	si:dkey-16l2.16	100	87.081	Kryptolebias_marmoratus
ENSXMAG00000021767	si:dkey-16l2.16	100	88.517	ENSLBEG00000007681	si:dkey-16l2.16	100	88.517	Labrus_bergylta
ENSXMAG00000021767	si:dkey-16l2.16	100	88.995	ENSMAMG00000019230	si:dkey-16l2.16	100	88.995	Mastacembelus_armatus
ENSXMAG00000021767	si:dkey-16l2.16	100	88.517	ENSMZEG00005002081	si:dkey-16l2.16	100	88.517	Maylandia_zebra
ENSXMAG00000021767	si:dkey-16l2.16	99	87.864	ENSMMOG00000020140	si:dkey-16l2.16	97	87.864	Mola_mola
ENSXMAG00000021767	si:dkey-16l2.16	100	88.038	ENSMALG00000014727	si:dkey-16l2.16	99	88.038	Monopterus_albus
ENSXMAG00000021767	si:dkey-16l2.16	100	88.517	ENSNBRG00000008930	si:dkey-16l2.16	100	88.517	Neolamprologus_brichardi
ENSXMAG00000021767	si:dkey-16l2.16	100	88.517	ENSONIG00000009443	si:dkey-16l2.16	100	88.517	Oreochromis_niloticus
ENSXMAG00000021767	si:dkey-16l2.16	100	84.689	ENSORLG00000001098	si:dkey-16l2.16	99	84.689	Oryzias_latipes
ENSXMAG00000021767	si:dkey-16l2.16	100	84.689	ENSORLG00020000867	si:dkey-16l2.16	99	84.689	Oryzias_latipes_hni
ENSXMAG00000021767	si:dkey-16l2.16	100	85.167	ENSOMEG00000015474	si:dkey-16l2.16	100	86.124	Oryzias_melastigma
ENSXMAG00000021767	si:dkey-16l2.16	100	86.124	ENSPKIG00000005686	-	100	86.124	Paramormyrops_kingsleyae
ENSXMAG00000021767	si:dkey-16l2.16	100	75.598	ENSPKIG00000018888	si:dkey-16l2.16	100	75.598	Paramormyrops_kingsleyae
ENSXMAG00000021767	si:dkey-16l2.16	100	87.560	ENSPMGG00000000751	si:dkey-16l2.16	100	87.560	Periophthalmus_magnuspinnatus
ENSXMAG00000021767	si:dkey-16l2.16	100	99.522	ENSPFOG00000004746	si:dkey-16l2.16	100	99.522	Poecilia_formosa
ENSXMAG00000021767	si:dkey-16l2.16	100	99.043	ENSPLAG00000021043	si:dkey-16l2.16	100	99.043	Poecilia_latipinna
ENSXMAG00000021767	si:dkey-16l2.16	100	99.522	ENSPMEG00000007165	si:dkey-16l2.16	100	99.522	Poecilia_mexicana
ENSXMAG00000021767	si:dkey-16l2.16	100	99.043	ENSPREG00000005323	si:dkey-16l2.16	100	99.043	Poecilia_reticulata
ENSXMAG00000021767	si:dkey-16l2.16	100	88.995	ENSPNYG00000009490	si:dkey-16l2.16	100	88.995	Pundamilia_nyererei
ENSXMAG00000021767	si:dkey-16l2.16	100	87.560	ENSPNAG00000018986	si:dkey-16l2.16	100	87.560	Pygocentrus_nattereri
ENSXMAG00000021767	si:dkey-16l2.16	99	77.404	ENSSFOG00015006414	-	99	77.404	Scleropages_formosus
ENSXMAG00000021767	si:dkey-16l2.16	100	86.124	ENSSFOG00015021448	-	100	86.124	Scleropages_formosus
ENSXMAG00000021767	si:dkey-16l2.16	100	84.689	ENSSMAG00000011769	si:dkey-16l2.16	94	84.689	Scophthalmus_maximus
ENSXMAG00000021767	si:dkey-16l2.16	100	90.909	ENSSDUG00000005719	si:dkey-16l2.16	100	90.909	Seriola_dumerili
ENSXMAG00000021767	si:dkey-16l2.16	100	90.909	ENSSLDG00000003631	si:dkey-16l2.16	100	90.909	Seriola_lalandi_dorsalis
ENSXMAG00000021767	si:dkey-16l2.16	100	88.995	ENSSPAG00000006302	si:dkey-16l2.16	100	88.995	Stegastes_partitus
ENSXMAG00000021767	si:dkey-16l2.16	100	88.517	ENSTRUG00000025076	si:dkey-16l2.16	94	96.639	Takifugu_rubripes
ENSXMAG00000021767	si:dkey-16l2.16	100	89.474	ENSTNIG00000011300	si:dkey-16l2.16	100	89.474	Tetraodon_nigroviridis