EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000021821 (Gene tree)
Gene ID: 102224738
Gene Symbol: rpusd2
Alias: -
Full Name: RNA pseudouridine synthase domain containing 2
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 6221 bases
Position: chr19:5077086-5083306
Accession: 102224738
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000022572	PseudoU_synth_2	PF00849.22	2.1e-32	1	1
ENSXMAP00000040803	PseudoU_synth_2	PF00849.22	2.5e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000039180	-	4961	XM_023352772	ENSXMAP00000022572	478 (aa)	XP_023208540	UPI0003B2F339
ENSXMAT00000034540	-	5040	XM_005801123	ENSXMAP00000040803	541 (aa)	XP_005801180	UPI000C6DDDFA

Gene Model

Click here to download ENSXMAG00000021821's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000021821's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000021821	rpusd2	92	58.590	ENSG00000166133	RPUSD2	82	58.590	Homo_sapiens
ENSXMAG00000021821	rpusd2	99	74.067	ENSAPOG00000000817	rpusd2	100	68.166	Acanthochromis_polyacanthus
ENSXMAG00000021821	rpusd2	92	57.451	ENSAMEG00000016996	RPUSD2	82	57.451	Ailuropoda_melanoleuca
ENSXMAG00000021821	rpusd2	99	79.296	ENSACIG00000024029	rpusd2	96	79.296	Amphilophus_citrinellus
ENSXMAG00000021821	rpusd2	98	74.111	ENSAOCG00000015237	rpusd2	99	68.348	Amphiprion_ocellaris
ENSXMAG00000021821	rpusd2	98	73.518	ENSAPEG00000021763	rpusd2	99	67.826	Amphiprion_percula
ENSXMAG00000021821	rpusd2	96	75.692	ENSATEG00000015242	rpusd2	100	68.289	Anabas_testudineus
ENSXMAG00000021821	rpusd2	86	60.808	ENSAPLG00000004723	RPUSD2	100	60.563	Anas_platyrhynchos
ENSXMAG00000021821	rpusd2	89	61.400	ENSACAG00000013893	RPUSD2	96	59.871	Anolis_carolinensis
ENSXMAG00000021821	rpusd2	92	58.991	ENSANAG00000009691	RPUSD2	89	55.781	Aotus_nancymaae
ENSXMAG00000021821	rpusd2	99	74.659	ENSACLG00000019531	rpusd2	100	68.259	Astatotilapia_calliptera
ENSXMAG00000021821	rpusd2	89	64.330	ENSAMXG00000013376	rpusd2	87	63.396	Astyanax_mexicanus
ENSXMAG00000021821	rpusd2	92	59.471	ENSBTAG00000003193	RPUSD2	81	59.471	Bos_taurus
ENSXMAG00000021821	rpusd2	81	35.567	WBGene00019498	K07E8.7	97	35.567	Caenorhabditis_elegans
ENSXMAG00000021821	rpusd2	92	58.590	ENSCJAG00000020841	RPUSD2	82	58.590	Callithrix_jacchus
ENSXMAG00000021821	rpusd2	92	57.516	ENSCAFG00000009165	RPUSD2	81	57.516	Canis_familiaris
ENSXMAG00000021821	rpusd2	92	57.516	ENSCAFG00020005849	RPUSD2	81	57.516	Canis_lupus_dingo
ENSXMAG00000021821	rpusd2	92	59.341	ENSCHIG00000006152	RPUSD2	81	59.341	Capra_hircus
ENSXMAG00000021821	rpusd2	92	59.031	ENSTSYG00000012844	RPUSD2	89	56.352	Carlito_syrichta
ENSXMAG00000021821	rpusd2	51	63.745	ENSCAPG00000006895	-	87	63.745	Cavia_aperea
ENSXMAG00000021821	rpusd2	99	56.198	ENSCPOG00000013201	RPUSD2	88	56.198	Cavia_porcellus
ENSXMAG00000021821	rpusd2	92	59.031	ENSCCAG00000024378	RPUSD2	82	59.031	Cebus_capucinus
ENSXMAG00000021821	rpusd2	97	56.875	ENSCATG00000043734	RPUSD2	85	56.879	Cercocebus_atys
ENSXMAG00000021821	rpusd2	99	56.198	ENSCLAG00000011862	RPUSD2	88	56.198	Chinchilla_lanigera
ENSXMAG00000021821	rpusd2	92	59.031	ENSCSAG00000007538	RPUSD2	88	59.031	Chlorocebus_sabaeus
ENSXMAG00000021821	rpusd2	69	54.885	ENSCHOG00000004834	RPUSD2	63	55.263	Choloepus_hoffmanni
ENSXMAG00000021821	rpusd2	92	58.763	ENSCPBG00000013419	RPUSD2	95	57.004	Chrysemys_picta_bellii
ENSXMAG00000021821	rpusd2	72	36.919	ENSCSAVG00000007812	-	99	36.919	Ciona_savignyi
ENSXMAG00000021821	rpusd2	92	58.553	ENSCANG00000003659	RPUSD2	82	58.553	Colobus_angolensis_palliatus
ENSXMAG00000021821	rpusd2	94	59.519	ENSCGRG00001009839	Rpusd2	79	59.519	Cricetulus_griseus_chok1gshd
ENSXMAG00000021821	rpusd2	94	59.519	ENSCGRG00000012348	Rpusd2	82	59.519	Cricetulus_griseus_crigri
ENSXMAG00000021821	rpusd2	97	70.101	ENSCSEG00000001953	rpusd2	87	68.421	Cynoglossus_semilaevis
ENSXMAG00000021821	rpusd2	100	82.329	ENSCVAG00000010848	rpusd2	100	78.662	Cyprinodon_variegatus
ENSXMAG00000021821	rpusd2	96	69.014	ENSDARG00000060992	rpusd2	84	69.215	Danio_rerio
ENSXMAG00000021821	rpusd2	98	56.017	ENSDNOG00000047745	RPUSD2	88	56.148	Dasypus_novemcinctus
ENSXMAG00000021821	rpusd2	88	60.185	ENSDORG00000009092	Rpusd2	99	60.185	Dipodomys_ordii
ENSXMAG00000021821	rpusd2	86	47.418	FBgn0032256	RluA-2	78	47.418	Drosophila_melanogaster
ENSXMAG00000021821	rpusd2	88	44.374	FBgn0051719	RluA-1	63	44.374	Drosophila_melanogaster
ENSXMAG00000021821	rpusd2	97	56.646	ENSETEG00000008581	RPUSD2	90	56.646	Echinops_telfairi
ENSXMAG00000021821	rpusd2	84	35.545	ENSEBUG00000012149	rpusd2	83	35.545	Eptatretus_burgeri
ENSXMAG00000021821	rpusd2	97	56.184	ENSEASG00005016463	RPUSD2	84	56.184	Equus_asinus_asinus
ENSXMAG00000021821	rpusd2	97	56.276	ENSECAG00000024178	RPUSD2	84	56.276	Equus_caballus
ENSXMAG00000021821	rpusd2	92	51.982	ENSEEUG00000005132	RPUSD2	95	49.008	Erinaceus_europaeus
ENSXMAG00000021821	rpusd2	99	68.317	ENSELUG00000016786	rpusd2	97	65.242	Esox_lucius
ENSXMAG00000021821	rpusd2	97	55.602	ENSFCAG00000040796	RPUSD2	85	55.602	Felis_catus
ENSXMAG00000021821	rpusd2	87	60.820	ENSFALG00000001122	RPUSD2	97	61.247	Ficedula_albicollis
ENSXMAG00000021821	rpusd2	99	55.901	ENSFDAG00000003070	RPUSD2	94	55.901	Fukomys_damarensis
ENSXMAG00000021821	rpusd2	100	80.838	ENSFHEG00000007518	rpusd2	100	78.843	Fundulus_heteroclitus
ENSXMAG00000021821	rpusd2	98	69.416	ENSGMOG00000011014	rpusd2	100	69.416	Gadus_morhua
ENSXMAG00000021821	rpusd2	93	58.281	ENSGALG00000041216	RPUSD2	96	58.281	Gallus_gallus
ENSXMAG00000021821	rpusd2	100	95.397	ENSGAFG00000003390	rpusd2	99	94.824	Gambusia_affinis
ENSXMAG00000021821	rpusd2	99	72.745	ENSGACG00000008656	rpusd2	97	72.374	Gasterosteus_aculeatus
ENSXMAG00000021821	rpusd2	98	59.465	ENSGAGG00000013098	RPUSD2	91	59.465	Gopherus_agassizii
ENSXMAG00000021821	rpusd2	97	56.485	ENSGGOG00000006684	RPUSD2	85	56.485	Gorilla_gorilla
ENSXMAG00000021821	rpusd2	99	74.854	ENSHBUG00000023777	rpusd2	100	68.081	Haplochromis_burtoni
ENSXMAG00000021821	rpusd2	99	56.639	ENSHGLG00000012765	RPUSD2	88	56.639	Heterocephalus_glaber_female
ENSXMAG00000021821	rpusd2	99	56.639	ENSHGLG00100006653	RPUSD2	88	56.639	Heterocephalus_glaber_male
ENSXMAG00000021821	rpusd2	96	73.320	ENSHCOG00000015587	rpusd2	97	66.261	Hippocampus_comes
ENSXMAG00000021821	rpusd2	95	70.981	ENSIPUG00000021006	rpusd2	81	70.981	Ictalurus_punctatus
ENSXMAG00000021821	rpusd2	94	58.442	ENSSTOG00000025619	RPUSD2	82	58.442	Ictidomys_tridecemlineatus
ENSXMAG00000021821	rpusd2	89	61.276	ENSJJAG00000023160	Rpusd2	94	56.496	Jaculus_jaculus
ENSXMAG00000021821	rpusd2	99	75.686	ENSKMAG00000006618	rpusd2	99	69.880	Kryptolebias_marmoratus
ENSXMAG00000021821	rpusd2	99	72.353	ENSLBEG00000021571	rpusd2	88	72.353	Labrus_bergylta
ENSXMAG00000021821	rpusd2	88	58.901	ENSLACG00000017338	RPUSD2	99	58.901	Latimeria_chalumnae
ENSXMAG00000021821	rpusd2	89	69.476	ENSLOCG00000014755	rpusd2	96	67.992	Lepisosteus_oculatus
ENSXMAG00000021821	rpusd2	92	59.071	ENSLAFG00000015588	RPUSD2	84	59.071	Loxodonta_africana
ENSXMAG00000021821	rpusd2	92	58.747	ENSMFAG00000045062	RPUSD2	82	58.747	Macaca_fascicularis
ENSXMAG00000021821	rpusd2	92	58.747	ENSMMUG00000001483	RPUSD2	82	58.747	Macaca_mulatta
ENSXMAG00000021821	rpusd2	92	51.288	ENSMNEG00000041429	RPUSD2	82	51.288	Macaca_nemestrina
ENSXMAG00000021821	rpusd2	69	56.410	ENSMLEG00000036551	RPUSD2	81	56.410	Mandrillus_leucophaeus
ENSXMAG00000021821	rpusd2	99	71.780	ENSMAMG00000001077	rpusd2	99	65.563	Mastacembelus_armatus
ENSXMAG00000021821	rpusd2	99	74.659	ENSMZEG00005006947	rpusd2	96	74.659	Maylandia_zebra
ENSXMAG00000021821	rpusd2	90	61.659	ENSMGAG00000003058	RPUSD2	97	61.659	Meleagris_gallopavo
ENSXMAG00000021821	rpusd2	99	56.341	ENSMAUG00000020467	Rpusd2	86	56.341	Mesocricetus_auratus
ENSXMAG00000021821	rpusd2	92	58.278	ENSMICG00000028637	RPUSD2	82	58.278	Microcebus_murinus
ENSXMAG00000021821	rpusd2	94	59.870	ENSMOCG00000020061	Rpusd2	82	59.870	Microtus_ochrogaster
ENSXMAG00000021821	rpusd2	97	79.918	ENSMMOG00000012020	rpusd2	93	74.717	Mola_mola
ENSXMAG00000021821	rpusd2	93	59.524	ENSMODG00000000300	RPUSD2	83	59.307	Monodelphis_domestica
ENSXMAG00000021821	rpusd2	99	69.157	ENSMALG00000010024	rpusd2	94	66.018	Monopterus_albus
ENSXMAG00000021821	rpusd2	99	55.918	MGP_CAROLIEiJ_G0024130	Rpusd2	87	55.918	Mus_caroli
ENSXMAG00000021821	rpusd2	99	56.148	ENSMUSG00000027324	Rpusd2	87	56.148	Mus_musculus
ENSXMAG00000021821	rpusd2	99	56.148	MGP_PahariEiJ_G0025573	Rpusd2	87	56.148	Mus_pahari
ENSXMAG00000021821	rpusd2	99	56.098	MGP_SPRETEiJ_G0025046	Rpusd2	88	55.847	Mus_spretus
ENSXMAG00000021821	rpusd2	94	57.082	ENSMPUG00000008517	RPUSD2	83	57.082	Mustela_putorius_furo
ENSXMAG00000021821	rpusd2	92	58.901	ENSMLUG00000007971	RPUSD2	89	58.991	Myotis_lucifugus
ENSXMAG00000021821	rpusd2	97	57.983	ENSNGAG00000014126	Rpusd2	86	57.983	Nannospalax_galili
ENSXMAG00000021821	rpusd2	99	78.119	ENSNBRG00000010070	rpusd2	100	70.996	Neolamprologus_brichardi
ENSXMAG00000021821	rpusd2	92	58.590	ENSNLEG00000035735	RPUSD2	82	58.590	Nomascus_leucogenys
ENSXMAG00000021821	rpusd2	98	57.971	ENSMEUG00000008500	RPUSD2	92	57.971	Notamacropus_eugenii
ENSXMAG00000021821	rpusd2	97	57.741	ENSOPRG00000014177	-	85	57.741	Ochotona_princeps
ENSXMAG00000021821	rpusd2	91	59.020	ENSODEG00000017193	RPUSD2	83	59.020	Octodon_degus
ENSXMAG00000021821	rpusd2	99	78.719	ENSONIG00000020102	rpusd2	96	78.719	Oreochromis_niloticus
ENSXMAG00000021821	rpusd2	54	69.261	ENSOANG00000011262	-	100	69.261	Ornithorhynchus_anatinus
ENSXMAG00000021821	rpusd2	97	57.083	ENSOCUG00000015745	RPUSD2	83	57.292	Oryctolagus_cuniculus
ENSXMAG00000021821	rpusd2	96	75.053	ENSORLG00000015516	rpusd2	99	67.089	Oryzias_latipes
ENSXMAG00000021821	rpusd2	96	75.264	ENSORLG00020010533	rpusd2	99	67.269	Oryzias_latipes_hni
ENSXMAG00000021821	rpusd2	96	75.053	ENSORLG00015009206	rpusd2	99	66.847	Oryzias_latipes_hsok
ENSXMAG00000021821	rpusd2	98	76.421	ENSOMEG00000007355	rpusd2	92	69.818	Oryzias_melastigma
ENSXMAG00000021821	rpusd2	92	57.451	ENSOGAG00000004867	RPUSD2	86	57.451	Otolemur_garnettii
ENSXMAG00000021821	rpusd2	89	59.410	ENSOARG00000020235	RPUSD2	95	54.511	Ovis_aries
ENSXMAG00000021821	rpusd2	92	58.590	ENSPPAG00000032874	RPUSD2	82	58.590	Pan_paniscus
ENSXMAG00000021821	rpusd2	98	55.556	ENSPPRG00000010446	RPUSD2	89	54.839	Panthera_pardus
ENSXMAG00000021821	rpusd2	98	55.556	ENSPTIG00000013316	RPUSD2	89	54.839	Panthera_tigris_altaica
ENSXMAG00000021821	rpusd2	92	58.590	ENSPTRG00000006924	RPUSD2	82	58.590	Pan_troglodytes
ENSXMAG00000021821	rpusd2	97	56.674	ENSPANG00000019339	RPUSD2	85	56.674	Papio_anubis
ENSXMAG00000021821	rpusd2	96	73.552	ENSPKIG00000023017	rpusd2	83	65.116	Paramormyrops_kingsleyae
ENSXMAG00000021821	rpusd2	69	60.172	ENSPSIG00000012680	RPUSD2	100	60.172	Pelodiscus_sinensis
ENSXMAG00000021821	rpusd2	96	76.739	ENSPMGG00000018165	rpusd2	87	74.274	Periophthalmus_magnuspinnatus
ENSXMAG00000021821	rpusd2	94	58.079	ENSPEMG00000012878	Rpusd2	85	58.079	Peromyscus_maniculatus_bairdii
ENSXMAG00000021821	rpusd2	93	60.948	ENSPCIG00000023199	RPUSD2	82	60.948	Phascolarctos_cinereus
ENSXMAG00000021821	rpusd2	100	93.776	ENSPFOG00000006829	rpusd2	100	92.661	Poecilia_formosa
ENSXMAG00000021821	rpusd2	100	93.568	ENSPLAG00000022914	rpusd2	100	93.568	Poecilia_latipinna
ENSXMAG00000021821	rpusd2	100	93.361	ENSPMEG00000009835	rpusd2	100	93.361	Poecilia_mexicana
ENSXMAG00000021821	rpusd2	100	94.191	ENSPREG00000016441	rpusd2	96	93.211	Poecilia_reticulata
ENSXMAG00000021821	rpusd2	92	58.370	ENSPPYG00000006355	RPUSD2	82	58.370	Pongo_abelii
ENSXMAG00000021821	rpusd2	99	54.207	ENSPCOG00000028019	RPUSD2	99	51.601	Propithecus_coquereli
ENSXMAG00000021821	rpusd2	97	55.852	ENSPVAG00000001837	RPUSD2	85	55.852	Pteropus_vampyrus
ENSXMAG00000021821	rpusd2	96	80.810	ENSPNYG00000021507	rpusd2	93	80.810	Pundamilia_nyererei
ENSXMAG00000021821	rpusd2	99	56.148	ENSRNOG00000010528	LOC100911166	87	56.148	Rattus_norvegicus
ENSXMAG00000021821	rpusd2	99	56.148	ENSRNOG00000046797	Rpusd2	87	56.148	Rattus_norvegicus
ENSXMAG00000021821	rpusd2	92	58.531	ENSRBIG00000030813	RPUSD2	82	58.531	Rhinopithecus_bieti
ENSXMAG00000021821	rpusd2	92	58.811	ENSRROG00000026664	RPUSD2	82	58.811	Rhinopithecus_roxellana
ENSXMAG00000021821	rpusd2	57	46.763	YDL036C	-	79	37.956	Saccharomyces_cerevisiae
ENSXMAG00000021821	rpusd2	82	39.163	YOL066C	RIB2	61	39.163	Saccharomyces_cerevisiae
ENSXMAG00000021821	rpusd2	92	59.031	ENSSBOG00000035031	RPUSD2	90	55.511	Saimiri_boliviensis_boliviensis
ENSXMAG00000021821	rpusd2	69	57.941	ENSSHAG00000015108	RPUSD2	90	57.941	Sarcophilus_harrisii
ENSXMAG00000021821	rpusd2	95	75.209	ENSSFOG00015019057	rpusd2	69	75.556	Scleropages_formosus
ENSXMAG00000021821	rpusd2	99	71.591	ENSSMAG00000000903	rpusd2	100	71.780	Scophthalmus_maximus
ENSXMAG00000021821	rpusd2	99	72.983	ENSSDUG00000019139	rpusd2	100	68.046	Seriola_dumerili
ENSXMAG00000021821	rpusd2	99	70.772	ENSSLDG00000005938	rpusd2	100	67.164	Seriola_lalandi_dorsalis
ENSXMAG00000021821	rpusd2	97	56.327	ENSSARG00000002792	RPUSD2	89	56.327	Sorex_araneus
ENSXMAG00000021821	rpusd2	92	58.495	ENSSPUG00000001206	RPUSD2	94	57.143	Sphenodon_punctatus
ENSXMAG00000021821	rpusd2	99	75.397	ENSSPAG00000003578	rpusd2	100	69.983	Stegastes_partitus
ENSXMAG00000021821	rpusd2	96	57.292	ENSSSCG00000036700	RPUSD2	85	57.292	Sus_scrofa
ENSXMAG00000021821	rpusd2	99	72.287	ENSTRUG00000025880	rpusd2	99	71.375	Takifugu_rubripes
ENSXMAG00000021821	rpusd2	99	75.918	ENSTNIG00000017329	rpusd2	98	75.918	Tetraodon_nigroviridis
ENSXMAG00000021821	rpusd2	97	49.897	ENSTBEG00000007933	RPUSD2	89	49.897	Tupaia_belangeri
ENSXMAG00000021821	rpusd2	92	58.009	ENSTTRG00000010585	RPUSD2	83	58.009	Tursiops_truncatus
ENSXMAG00000021821	rpusd2	92	58.531	ENSUAMG00000001470	RPUSD2	88	58.531	Ursus_americanus
ENSXMAG00000021821	rpusd2	92	58.531	ENSUMAG00000012487	RPUSD2	72	58.531	Ursus_maritimus
ENSXMAG00000021821	rpusd2	92	59.284	ENSVPAG00000003844	RPUSD2	86	56.813	Vicugna_pacos
ENSXMAG00000021821	rpusd2	92	57.516	ENSVVUG00000026590	RPUSD2	81	57.516	Vulpes_vulpes
ENSXMAG00000021821	rpusd2	94	58.761	ENSXETG00000015973	rpusd2	99	58.761	Xenopus_tropicalis