EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000021849 (Gene tree)
Gene ID: -
Gene Symbol: srsf6a
Alias: fa12h12|sfrs6a|wu:fa12h12|wu:fa13e06|zgc:63770
Full Name: serine/arginine-rich splicing factor 6
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 4472 bases
Position: chr1:9932554-9937025
Accession: 102221465
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000037196	RRM_1	PF00076.22	1.3e-31	1	2
ENSXMAP00000037196	RRM_1	PF00076.22	1.3e-31	2	2
ENSXMAP00000037379	RRM_1	PF00076.22	2.8e-06	1	1
ENSXMAP00000037196	RRM_3	PF08777.11	9.7e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000031751	-	2138	-	ENSXMAP00000037379	246 (aa)	-	-
ENSXMAT00000037974	-	996	XM_023331839	ENSXMAP00000037196	331 (aa)	XP_023187607	-

Gene Model

Click here to download ENSXMAG00000021849's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000021849's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000021849	srsf6a	55	86.413	ENSG00000124193	SRSF6	58	92.308	Homo_sapiens
ENSXMAG00000021849	srsf6a	91	80.269	ENSAPOG00000000810	srsf6a	92	82.589	Acanthochromis_polyacanthus
ENSXMAG00000021849	srsf6a	55	69.730	ENSAMEG00000003710	SRSF6	53	69.565	Ailuropoda_melanoleuca
ENSXMAG00000021849	srsf6a	92	83.987	ENSACIG00000023658	-	91	86.645	Amphilophus_citrinellus
ENSXMAG00000021849	srsf6a	73	73.171	ENSACIG00000020091	-	95	81.890	Amphilophus_citrinellus
ENSXMAG00000021849	srsf6a	91	85.202	ENSAOCG00000019410	-	91	85.268	Amphiprion_ocellaris
ENSXMAG00000021849	srsf6a	55	85.083	ENSAOCG00000004309	-	57	85.083	Amphiprion_ocellaris
ENSXMAG00000021849	srsf6a	93	76.506	ENSAPEG00000013086	-	91	55.459	Amphiprion_percula
ENSXMAG00000021849	srsf6a	56	81.579	ENSAPEG00000020746	-	65	80.978	Amphiprion_percula
ENSXMAG00000021849	srsf6a	54	83.333	ENSATEG00000007255	-	71	79.781	Anabas_testudineus
ENSXMAG00000021849	srsf6a	55	88.398	ENSACAG00000002061	SRSF6	52	88.398	Anolis_carolinensis
ENSXMAG00000021849	srsf6a	55	86.413	ENSANAG00000024080	SRSF6	58	92.308	Aotus_nancymaae
ENSXMAG00000021849	srsf6a	93	70.769	ENSAMXG00000042692	-	96	82.963	Astyanax_mexicanus
ENSXMAG00000021849	srsf6a	55	86.413	ENSBTAG00000008527	SRSF6	58	93.590	Bos_taurus
ENSXMAG00000021849	srsf6a	55	86.413	ENSCJAG00000048403	SRSF6	68	86.885	Callithrix_jacchus
ENSXMAG00000021849	srsf6a	55	86.413	ENSCAFG00000009289	SRSF6	58	93.590	Canis_familiaris
ENSXMAG00000021849	srsf6a	55	86.413	ENSCAFG00020013559	SRSF6	58	93.590	Canis_lupus_dingo
ENSXMAG00000021849	srsf6a	55	85.326	ENSCHIG00000009148	-	53	85.792	Capra_hircus
ENSXMAG00000021849	srsf6a	55	86.413	ENSCHIG00000015890	-	58	93.590	Capra_hircus
ENSXMAG00000021849	srsf6a	55	80.978	ENSCPOG00000011761	SRSF6	58	92.308	Cavia_porcellus
ENSXMAG00000021849	srsf6a	55	86.413	ENSCCAG00000026018	-	58	92.308	Cebus_capucinus
ENSXMAG00000021849	srsf6a	55	76.757	ENSCCAG00000018540	-	60	75.543	Cebus_capucinus
ENSXMAG00000021849	srsf6a	55	86.413	ENSCATG00000030794	SRSF6	58	92.308	Cercocebus_atys
ENSXMAG00000021849	srsf6a	55	86.413	ENSCLAG00000010247	SRSF6	58	92.308	Chinchilla_lanigera
ENSXMAG00000021849	srsf6a	55	86.413	ENSCSAG00000014022	SRSF6	53	86.885	Chlorocebus_sabaeus
ENSXMAG00000021849	srsf6a	55	85.561	ENSCPBG00000018200	SRSF6	54	87.097	Chrysemys_picta_bellii
ENSXMAG00000021849	srsf6a	55	85.326	ENSCANG00000037774	-	53	85.792	Colobus_angolensis_palliatus
ENSXMAG00000021849	srsf6a	55	86.413	ENSCGRG00001022339	Srsf6	58	92.308	Cricetulus_griseus_chok1gshd
ENSXMAG00000021849	srsf6a	55	87.166	ENSDARG00000016783	srsf6b	82	94.872	Danio_rerio
ENSXMAG00000021849	srsf6a	55	86.413	ENSDNOG00000008410	SRSF6	53	86.885	Dasypus_novemcinctus
ENSXMAG00000021849	srsf6a	55	86.413	ENSDORG00000028378	Srsf6	58	92.308	Dipodomys_ordii
ENSXMAG00000021849	srsf6a	55	84.153	ENSETEG00000006221	SRSF6	53	84.615	Echinops_telfairi
ENSXMAG00000021849	srsf6a	55	86.413	ENSEASG00005023429	SRSF6	53	86.885	Equus_asinus_asinus
ENSXMAG00000021849	srsf6a	55	86.413	ENSECAG00000023932	SRSF6	56	86.885	Equus_caballus
ENSXMAG00000021849	srsf6a	93	64.478	ENSELUG00000013506	SRSF6	95	71.795	Esox_lucius
ENSXMAG00000021849	srsf6a	55	87.166	ENSELUG00000024182	SRSF6	90	84.553	Esox_lucius
ENSXMAG00000021849	srsf6a	55	86.413	ENSFCAG00000032814	SRSF6	53	86.885	Felis_catus
ENSXMAG00000021849	srsf6a	93	88.608	ENSFHEG00000023065	srsf6a	93	89.241	Fundulus_heteroclitus
ENSXMAG00000021849	srsf6a	53	77.401	ENSGMOG00000006105	srsf6a	62	74.157	Gadus_morhua
ENSXMAG00000021849	srsf6a	59	82.653	ENSGMOG00000014458	srsf6a	51	79.474	Gadus_morhua
ENSXMAG00000021849	srsf6a	55	87.166	ENSGALG00000000990	SRSF6	58	94.872	Gallus_gallus
ENSXMAG00000021849	srsf6a	100	97.154	ENSGAFG00000019087	srsf6a	100	97.154	Gambusia_affinis
ENSXMAG00000021849	srsf6a	93	72.599	ENSGACG00000006084	srsf6a	95	72.958	Gasterosteus_aculeatus
ENSXMAG00000021849	srsf6a	55	85.561	ENSGAGG00000003238	SRSF6	54	87.097	Gopherus_agassizii
ENSXMAG00000021849	srsf6a	55	86.413	ENSGGOG00000009808	SRSF6	58	92.308	Gorilla_gorilla
ENSXMAG00000021849	srsf6a	69	74.783	ENSHBUG00000006386	-	57	85.635	Haplochromis_burtoni
ENSXMAG00000021849	srsf6a	55	86.413	ENSHGLG00000007348	SRSF6	58	92.308	Heterocephalus_glaber_female
ENSXMAG00000021849	srsf6a	57	68.912	ENSHGLG00000007701	-	57	67.403	Heterocephalus_glaber_female
ENSXMAG00000021849	srsf6a	91	74.419	ENSHCOG00000002740	srsf6a	94	75.405	Hippocampus_comes
ENSXMAG00000021849	srsf6a	55	89.011	ENSIPUG00000004776	-	63	89.503	Ictalurus_punctatus
ENSXMAG00000021849	srsf6a	55	86.413	ENSSTOG00000010866	SRSF6	58	92.308	Ictidomys_tridecemlineatus
ENSXMAG00000021849	srsf6a	93	79.288	ENSKMAG00000011934	srsf6a	91	87.946	Kryptolebias_marmoratus
ENSXMAG00000021849	srsf6a	54	91.304	ENSLBEG00000007356	srsf6a	51	90.217	Labrus_bergylta
ENSXMAG00000021849	srsf6a	90	72.403	ENSLACG00000005466	SRSF6	54	86.339	Latimeria_chalumnae
ENSXMAG00000021849	srsf6a	55	86.413	ENSMFAG00000036925	SRSF6	58	92.308	Macaca_fascicularis
ENSXMAG00000021849	srsf6a	55	86.413	ENSMMUG00000006742	SRSF6	58	92.308	Macaca_mulatta
ENSXMAG00000021849	srsf6a	55	85.870	ENSMNEG00000027392	-	58	91.026	Macaca_nemestrina
ENSXMAG00000021849	srsf6a	55	85.870	ENSMNEG00000038270	-	53	86.339	Macaca_nemestrina
ENSXMAG00000021849	srsf6a	55	94.595	ENSMAMG00000017161	srsf6a	94	81.381	Mastacembelus_armatus
ENSXMAG00000021849	srsf6a	54	87.709	ENSMZEG00005020658	-	60	85.475	Maylandia_zebra
ENSXMAG00000021849	srsf6a	55	85.635	ENSMZEG00005008032	-	57	85.635	Maylandia_zebra
ENSXMAG00000021849	srsf6a	55	85.870	ENSMICG00000008537	SRSF6	58	92.308	Microcebus_murinus
ENSXMAG00000021849	srsf6a	55	85.946	ENSMODG00000003107	SRSF6	54	86.957	Monodelphis_domestica
ENSXMAG00000021849	srsf6a	100	68.922	ENSMALG00000003702	srsf6a	100	68.922	Monopterus_albus
ENSXMAG00000021849	srsf6a	55	86.413	MGP_CAROLIEiJ_G0024606	Srsf6	58	92.308	Mus_caroli
ENSXMAG00000021849	srsf6a	55	86.413	ENSMUSG00000016921	Srsf6	58	92.308	Mus_musculus
ENSXMAG00000021849	srsf6a	55	86.413	MGP_PahariEiJ_G0026050	Srsf6	58	92.308	Mus_pahari
ENSXMAG00000021849	srsf6a	55	86.413	MGP_SPRETEiJ_G0025528	Srsf6	58	92.308	Mus_spretus
ENSXMAG00000021849	srsf6a	55	86.413	ENSMPUG00000017692	SRSF6	64	86.885	Mustela_putorius_furo
ENSXMAG00000021849	srsf6a	55	59.330	ENSMLUG00000016618	SRSF6	53	58.937	Myotis_lucifugus
ENSXMAG00000021849	srsf6a	55	86.413	ENSNGAG00000017560	Srsf6	58	92.308	Nannospalax_galili
ENSXMAG00000021849	srsf6a	86	93.443	ENSNBRG00000001846	-	91	76.435	Neolamprologus_brichardi
ENSXMAG00000021849	srsf6a	55	85.635	ENSNBRG00000014709	-	57	85.635	Neolamprologus_brichardi
ENSXMAG00000021849	srsf6a	55	86.413	ENSNLEG00000006524	SRSF6	58	92.308	Nomascus_leucogenys
ENSXMAG00000021849	srsf6a	55	85.946	ENSMEUG00000014615	SRSF6	61	86.957	Notamacropus_eugenii
ENSXMAG00000021849	srsf6a	93	80.000	ENSONIG00000001925	-	88	80.997	Oreochromis_niloticus
ENSXMAG00000021849	srsf6a	55	68.205	ENSOCUG00000009785	-	63	68.254	Oryctolagus_cuniculus
ENSXMAG00000021849	srsf6a	75	46.774	ENSOCUG00000023999	-	70	54.237	Oryctolagus_cuniculus
ENSXMAG00000021849	srsf6a	55	75.824	ENSOMEG00000006001	srsf6a	94	59.710	Oryzias_melastigma
ENSXMAG00000021849	srsf6a	55	85.870	ENSOGAG00000014468	SRSF6	53	86.339	Otolemur_garnettii
ENSXMAG00000021849	srsf6a	55	84.153	ENSOARG00000003117	SRSF6	53	84.066	Ovis_aries
ENSXMAG00000021849	srsf6a	55	73.077	ENSPPAG00000043131	-	57	72.376	Pan_paniscus
ENSXMAG00000021849	srsf6a	55	85.870	ENSPPAG00000034327	-	53	86.339	Pan_paniscus
ENSXMAG00000021849	srsf6a	55	86.413	ENSPPRG00000008917	SRSF6	53	86.885	Panthera_pardus
ENSXMAG00000021849	srsf6a	55	86.413	ENSPTRG00000044686	-	58	92.308	Pan_troglodytes
ENSXMAG00000021849	srsf6a	55	73.077	ENSPTRG00000046274	-	57	72.376	Pan_troglodytes
ENSXMAG00000021849	srsf6a	55	86.413	ENSPANG00000035224	SRSF6	58	92.308	Papio_anubis
ENSXMAG00000021849	srsf6a	53	74.860	ENSPKIG00000015703	-	95	63.265	Paramormyrops_kingsleyae
ENSXMAG00000021849	srsf6a	91	92.593	ENSPKIG00000018463	-	77	96.154	Paramormyrops_kingsleyae
ENSXMAG00000021849	srsf6a	93	78.981	ENSPMGG00000014963	srsf6a	55	93.443	Periophthalmus_magnuspinnatus
ENSXMAG00000021849	srsf6a	55	85.946	ENSPCIG00000003820	SRSF6	58	94.872	Phascolarctos_cinereus
ENSXMAG00000021849	srsf6a	100	97.561	ENSPFOG00000006437	srsf6a	77	97.154	Poecilia_formosa
ENSXMAG00000021849	srsf6a	100	97.967	ENSPLAG00000009243	srsf6a	100	92.394	Poecilia_latipinna
ENSXMAG00000021849	srsf6a	62	98.529	ENSPMEG00000006056	SRSF6	100	98.529	Poecilia_mexicana
ENSXMAG00000021849	srsf6a	100	94.186	ENSPMEG00000006042	SRSF6	100	94.186	Poecilia_mexicana
ENSXMAG00000021849	srsf6a	55	86.413	ENSPPYG00000011019	SRSF6	53	86.885	Pongo_abelii
ENSXMAG00000021849	srsf6a	55	85.870	ENSPCAG00000010954	SRSF6	55	86.339	Procavia_capensis
ENSXMAG00000021849	srsf6a	55	85.870	ENSPCOG00000026364	SRSF6	58	92.308	Propithecus_coquereli
ENSXMAG00000021849	srsf6a	55	86.957	ENSPVAG00000015232	SRSF6	53	87.912	Pteropus_vampyrus
ENSXMAG00000021849	srsf6a	55	85.635	ENSPNYG00000004944	-	57	85.635	Pundamilia_nyererei
ENSXMAG00000021849	srsf6a	55	86.413	ENSRNOG00000006380	Srsf6	54	86.885	Rattus_norvegicus
ENSXMAG00000021849	srsf6a	55	88.462	ENSRBIG00000041414	SRSF6	60	92.308	Rhinopithecus_bieti
ENSXMAG00000021849	srsf6a	55	86.413	ENSRROG00000029989	SRSF6	58	92.308	Rhinopithecus_roxellana
ENSXMAG00000021849	srsf6a	54	71.111	ENSSBOG00000034078	-	54	70.391	Saimiri_boliviensis_boliviensis
ENSXMAG00000021849	srsf6a	55	86.413	ENSSBOG00000033708	-	58	92.308	Saimiri_boliviensis_boliviensis
ENSXMAG00000021849	srsf6a	55	85.946	ENSSHAG00000012805	SRSF6	54	86.957	Sarcophilus_harrisii
ENSXMAG00000021849	srsf6a	54	92.778	ENSSFOG00015015169	SRSF6	93	74.919	Scleropages_formosus
ENSXMAG00000021849	srsf6a	91	59.821	ENSSMAG00000014819	-	83	75.349	Scophthalmus_maximus
ENSXMAG00000021849	srsf6a	54	80.556	ENSSMAG00000017447	-	55	80.556	Scophthalmus_maximus
ENSXMAG00000021849	srsf6a	55	94.595	ENSSDUG00000016097	srsf6a	94	79.880	Seriola_dumerili
ENSXMAG00000021849	srsf6a	93	75.229	ENSSLDG00000022841	srsf6a	94	79.880	Seriola_lalandi_dorsalis
ENSXMAG00000021849	srsf6a	55	89.503	ENSSPUG00000004967	SRSF6	58	94.872	Sphenodon_punctatus
ENSXMAG00000021849	srsf6a	93	68.889	ENSSPAG00000002362	srsf6a	86	76.923	Stegastes_partitus
ENSXMAG00000021849	srsf6a	55	86.413	ENSSSCG00000007362	SRSF6	61	86.885	Sus_scrofa
ENSXMAG00000021849	srsf6a	55	86.413	ENSTGUG00000003455	SRSF6	53	87.500	Taeniopygia_guttata
ENSXMAG00000021849	srsf6a	92	75.000	ENSTNIG00000001692	srsf6a	95	74.051	Tetraodon_nigroviridis
ENSXMAG00000021849	srsf6a	55	86.413	ENSUAMG00000003559	SRSF6	58	93.590	Ursus_americanus