EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000021863 (Gene tree)
Gene ID: 111609484
Gene Symbol: -
Alias: -
Full Name: polyadenylate-binding protein 3-like
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 1908 bases
Position: chr8:18823995-18825902
Accession: 111609484
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000022074	PABP	PF00658.18	1.6e-44	1	3
ENSXMAP00000022074	PABP	PF00658.18	1.6e-44	2	3
ENSXMAP00000022074	PABP	PF00658.18	1.6e-44	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000041303	-	651	XM_023338193	ENSXMAP00000022074	216 (aa)	XP_023193961	UPI000C6E8CCD

Gene Model

Click here to download ENSXMAG00000021863's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000021863's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000021863	-	99	78.505	ENSAPOG00000023881	-	100	78.505	Acanthochromis_polyacanthus
ENSXMAG00000021863	-	99	78.037	ENSAOCG00000019884	-	100	78.037	Amphiprion_ocellaris
ENSXMAG00000021863	-	99	78.037	ENSAPEG00000020987	-	100	78.037	Amphiprion_percula
ENSXMAG00000021863	-	98	77.103	ENSATEG00000013831	-	99	77.103	Anabas_testudineus
ENSXMAG00000021863	-	99	78.972	ENSACLG00000027916	-	100	78.972	Astatotilapia_calliptera
ENSXMAG00000021863	-	99	57.870	ENSAMXG00000041484	-	95	57.870	Astyanax_mexicanus
ENSXMAG00000021863	-	95	72.727	ENSCSEG00000001317	-	100	72.727	Cynoglossus_semilaevis
ENSXMAG00000021863	-	100	86.111	ENSCVAG00000000578	-	100	86.111	Cyprinodon_variegatus
ENSXMAG00000021863	-	99	66.977	ENSELUG00000001731	-	80	66.977	Esox_lucius
ENSXMAG00000021863	-	100	86.111	ENSFHEG00000007741	-	100	86.111	Fundulus_heteroclitus
ENSXMAG00000021863	-	99	84.783	ENSGAFG00000012983	-	70	84.783	Gambusia_affinis
ENSXMAG00000021863	-	98	76.777	ENSHBUG00000000185	-	59	76.777	Haplochromis_burtoni
ENSXMAG00000021863	-	99	64.815	ENSHCOG00000003117	-	100	64.815	Hippocampus_comes
ENSXMAG00000021863	-	99	82.160	ENSKMAG00000011397	-	99	82.160	Kryptolebias_marmoratus
ENSXMAG00000021863	-	99	78.505	ENSLBEG00000027847	-	96	78.505	Labrus_bergylta
ENSXMAG00000021863	-	87	59.848	ENSLOCG00000003085	-	99	57.595	Lepisosteus_oculatus
ENSXMAG00000021863	-	99	80.841	ENSMAMG00000017628	-	100	80.841	Mastacembelus_armatus
ENSXMAG00000021863	-	95	71.038	ENSMMOG00000004490	-	91	71.038	Mola_mola
ENSXMAG00000021863	-	98	79.147	ENSMALG00000004586	-	99	79.147	Monopterus_albus
ENSXMAG00000021863	-	96	78.212	ENSNBRG00000006752	-	74	78.212	Neolamprologus_brichardi
ENSXMAG00000021863	-	93	60.000	ENSPKIG00000005307	-	93	60.377	Paramormyrops_kingsleyae
ENSXMAG00000021863	-	98	64.324	ENSPMGG00000004590	-	98	64.324	Periophthalmus_magnuspinnatus
ENSXMAG00000021863	-	98	94.811	ENSPFOG00000023453	-	99	94.811	Poecilia_formosa
ENSXMAG00000021863	-	100	94.907	ENSPLAG00000003198	-	100	94.907	Poecilia_latipinna
ENSXMAG00000021863	-	94	85.556	ENSPMEG00000022008	-	83	85.556	Poecilia_mexicana
ENSXMAG00000021863	-	100	87.500	ENSPREG00000001981	-	99	87.500	Poecilia_reticulata
ENSXMAG00000021863	-	94	77.844	ENSPNYG00000004740	-	86	77.844	Pundamilia_nyererei
ENSXMAG00000021863	-	85	46.277	ENSPNAG00000018692	-	73	46.277	Pygocentrus_nattereri
ENSXMAG00000021863	-	98	62.264	ENSSFOG00015001322	-	95	62.264	Scleropages_formosus
ENSXMAG00000021863	-	97	77.143	ENSSMAG00000008778	-	98	77.143	Scophthalmus_maximus
ENSXMAG00000021863	-	100	80.093	ENSSDUG00000015116	-	100	80.093	Seriola_dumerili
ENSXMAG00000021863	-	100	79.167	ENSSLDG00000000425	-	100	79.167	Seriola_lalandi_dorsalis
ENSXMAG00000021863	-	99	81.308	ENSSPAG00000015141	-	100	81.308	Stegastes_partitus
ENSXMAG00000021863	-	100	71.429	ENSTRUG00000021899	-	99	71.429	Takifugu_rubripes
ENSXMAG00000021863	-	99	65.421	ENSTNIG00000002576	-	99	65.421	Tetraodon_nigroviridis
ENSXMAG00000021863	-	100	78.241	ENSXCOG00000001548	-	98	78.241	Xiphophorus_couchianus