EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000021869 (Gene tree)
Gene ID: 111610690
Gene Symbol: si:ch1073-385f13.3
Alias: -
Full Name: DNA polymerase III PolC-type-like
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 5859 bases
Position: chr2:26080105-26085963
Accession: 111610690
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000037597	RNase_T	PF00929.24	1.1e-10	1	1
ENSXMAP00000041106	RNase_T	PF00929.24	1.1e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000028449	-	2371	-	ENSXMAP00000041106	197 (aa)	-	UPI000C6D3FF0
ENSXMAT00000028593	-	2256	XM_023345532	ENSXMAP00000037597	197 (aa)	XP_023201300	UPI000C6D3FF0

Gene Model

Click here to download ENSXMAG00000021869's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000021869's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000021869	si:ch1073-385f13.3	88	38.286	ENSAOCG00000011593	si:ch1073-296i8.2	62	38.286	Amphiprion_ocellaris
ENSXMAG00000021869	si:ch1073-385f13.3	88	38.286	ENSAPEG00000012492	si:ch1073-296i8.2	62	38.286	Amphiprion_percula
ENSXMAG00000021869	si:ch1073-385f13.3	99	59.487	ENSATEG00000021542	si:ch1073-385f13.3	100	59.487	Anabas_testudineus
ENSXMAG00000021869	si:ch1073-385f13.3	96	36.979	ENSATEG00000021547	si:ch1073-296i8.2	75	36.979	Anabas_testudineus
ENSXMAG00000021869	si:ch1073-385f13.3	90	61.017	ENSACLG00000023991	-	54	61.017	Astatotilapia_calliptera
ENSXMAG00000021869	si:ch1073-385f13.3	96	64.211	ENSCVAG00000001533	-	97	64.211	Cyprinodon_variegatus
ENSXMAG00000021869	si:ch1073-385f13.3	94	44.149	ENSDARG00000093773	si:ch1073-296i8.2	79	44.149	Danio_rerio
ENSXMAG00000021869	si:ch1073-385f13.3	96	44.792	ENSDARG00000092584	si:ch1073-385f13.3	78	44.792	Danio_rerio
ENSXMAG00000021869	si:ch1073-385f13.3	99	65.816	ENSFHEG00000018181	-	99	65.816	Fundulus_heteroclitus
ENSXMAG00000021869	si:ch1073-385f13.3	95	39.683	ENSFHEG00000018188	si:ch1073-296i8.2	76	39.683	Fundulus_heteroclitus
ENSXMAG00000021869	si:ch1073-385f13.3	92	54.696	ENSGMOG00000019565	-	96	54.696	Gadus_morhua
ENSXMAG00000021869	si:ch1073-385f13.3	88	44.886	ENSGMOG00000019335	si:ch1073-296i8.2	98	44.886	Gadus_morhua
ENSXMAG00000021869	si:ch1073-385f13.3	88	43.750	ENSGACG00000007185	si:ch1073-296i8.2	97	43.750	Gasterosteus_aculeatus
ENSXMAG00000021869	si:ch1073-385f13.3	98	63.731	ENSHBUG00000007541	si:ch1073-385f13.3	98	63.731	Haplochromis_burtoni
ENSXMAG00000021869	si:ch1073-385f13.3	95	40.000	ENSHCOG00000008574	si:ch1073-296i8.2	79	40.000	Hippocampus_comes
ENSXMAG00000021869	si:ch1073-385f13.3	97	40.933	ENSKMAG00000015660	si:ch1073-296i8.2	86	40.933	Kryptolebias_marmoratus
ENSXMAG00000021869	si:ch1073-385f13.3	99	62.944	ENSKMAG00000015669	-	100	62.944	Kryptolebias_marmoratus
ENSXMAG00000021869	si:ch1073-385f13.3	89	43.017	ENSLBEG00000019623	si:ch1073-296i8.2	70	43.017	Labrus_bergylta
ENSXMAG00000021869	si:ch1073-385f13.3	96	50.000	ENSLOCG00000014933	-	96	50.000	Lepisosteus_oculatus
ENSXMAG00000021869	si:ch1073-385f13.3	94	56.452	ENSMAMG00000023075	si:ch1073-385f13.3	96	56.452	Mastacembelus_armatus
ENSXMAG00000021869	si:ch1073-385f13.3	73	39.726	ENSMMOG00000018979	si:ch1073-296i8.2	68	39.726	Mola_mola
ENSXMAG00000021869	si:ch1073-385f13.3	96	59.474	ENSMALG00000015952	si:ch1073-385f13.3	97	59.474	Monopterus_albus
ENSXMAG00000021869	si:ch1073-385f13.3	98	63.212	ENSONIG00000012794	si:ch1073-385f13.3	98	63.212	Oreochromis_niloticus
ENSXMAG00000021869	si:ch1073-385f13.3	98	39.487	ENSORLG00000023958	si:ch1073-296i8.2	88	39.487	Oryzias_latipes
ENSXMAG00000021869	si:ch1073-385f13.3	98	62.371	ENSORLG00000030645	si:ch1073-385f13.3	88	62.371	Oryzias_latipes
ENSXMAG00000021869	si:ch1073-385f13.3	96	39.791	ENSORLG00020021912	si:ch1073-296i8.2	86	39.791	Oryzias_latipes_hni
ENSXMAG00000021869	si:ch1073-385f13.3	98	62.371	ENSORLG00020021903	-	99	62.371	Oryzias_latipes_hni
ENSXMAG00000021869	si:ch1073-385f13.3	98	39.487	ENSORLG00015015303	si:ch1073-296i8.2	88	39.487	Oryzias_latipes_hsok
ENSXMAG00000021869	si:ch1073-385f13.3	96	46.114	ENSPKIG00000023552	-	89	46.114	Paramormyrops_kingsleyae
ENSXMAG00000021869	si:ch1073-385f13.3	94	81.720	ENSPFOG00000021742	-	98	81.720	Poecilia_formosa
ENSXMAG00000021869	si:ch1073-385f13.3	99	83.590	ENSPFOG00000005521	si:ch1073-385f13.3	99	83.590	Poecilia_formosa
ENSXMAG00000021869	si:ch1073-385f13.3	100	84.772	ENSPMEG00000013096	si:ch1073-385f13.3	100	84.772	Poecilia_mexicana
ENSXMAG00000021869	si:ch1073-385f13.3	97	80.729	ENSPMEG00000013087	si:ch1073-385f13.3	100	80.729	Poecilia_mexicana
ENSXMAG00000021869	si:ch1073-385f13.3	94	72.300	ENSPREG00000013537	-	81	72.300	Poecilia_reticulata
ENSXMAG00000021869	si:ch1073-385f13.3	93	48.634	ENSPNAG00000018956	si:ch1073-385f13.3	97	48.634	Pygocentrus_nattereri
ENSXMAG00000021869	si:ch1073-385f13.3	95	39.683	ENSSMAG00000004874	si:ch1073-296i8.2	72	39.683	Scophthalmus_maximus
ENSXMAG00000021869	si:ch1073-385f13.3	97	62.827	ENSSLDG00000002379	si:ch1073-385f13.3	97	62.827	Seriola_lalandi_dorsalis
ENSXMAG00000021869	si:ch1073-385f13.3	95	39.153	ENSSPAG00000012797	si:ch1073-296i8.2	96	39.153	Stegastes_partitus
ENSXMAG00000021869	si:ch1073-385f13.3	89	42.697	ENSTNIG00000010399	si:ch1073-296i8.2	77	42.697	Tetraodon_nigroviridis