EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000022076 (Gene tree)
Gene ID: 102238252
Gene Symbol: sharpin
Alias: sipl1
Full Name: SHANK associated RH domain interactor
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 5681 bases
Position: chr6:16716091-16721771
Accession: 102238252
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000033742	zf-RanBP	PF00641.18	2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000032872	-	2070	XM_005812869	ENSXMAP00000033742	435 (aa)	XP_005812926	UPI0003B61B63

Gene Model

Click here to download ENSXMAG00000022076's gene model file

Pathways

Pathway ID	Pathway Name	Source
xma04217	Necroptosis	KEGG
xma04621	NOD-like receptor signaling pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000022076's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000022076	sharpin	99	53.846	ENSAPOG00000022737	shrprbck1r	65	53.846	Acanthochromis_polyacanthus
ENSXMAG00000022076	sharpin	100	83.105	ENSAPOG00000023352	sharpin	100	83.105	Acanthochromis_polyacanthus
ENSXMAG00000022076	sharpin	95	56.148	ENSACIG00000002184	shrprbck1r	97	51.695	Amphilophus_citrinellus
ENSXMAG00000022076	sharpin	99	53.105	ENSAOCG00000002890	shrprbck1r	65	53.105	Amphiprion_ocellaris
ENSXMAG00000022076	sharpin	100	83.790	ENSAOCG00000017464	sharpin	100	83.790	Amphiprion_ocellaris
ENSXMAG00000022076	sharpin	99	51.923	ENSAPEG00000023274	shrprbck1r	64	51.923	Amphiprion_percula
ENSXMAG00000022076	sharpin	100	83.790	ENSAPEG00000004049	sharpin	100	83.790	Amphiprion_percula
ENSXMAG00000022076	sharpin	96	80.000	ENSATEG00000007832	sharpin	88	80.000	Anabas_testudineus
ENSXMAG00000022076	sharpin	95	54.186	ENSATEG00000014561	shrprbck1r	59	54.801	Anabas_testudineus
ENSXMAG00000022076	sharpin	95	55.116	ENSACLG00000022609	shrprbck1r	59	56.351	Astatotilapia_calliptera
ENSXMAG00000022076	sharpin	62	93.939	ENSACLG00000020160	-	86	93.939	Astatotilapia_calliptera
ENSXMAG00000022076	sharpin	95	56.818	ENSAMXG00000021016	shrprbck1r	66	57.273	Astyanax_mexicanus
ENSXMAG00000022076	sharpin	87	54.082	ENSAMXG00000006229	sharpin	96	54.082	Astyanax_mexicanus
ENSXMAG00000022076	sharpin	95	50.816	ENSCSEG00000011306	shrprbck1r	59	50.816	Cynoglossus_semilaevis
ENSXMAG00000022076	sharpin	100	92.431	ENSCVAG00000006586	sharpin	100	92.431	Cyprinodon_variegatus
ENSXMAG00000022076	sharpin	95	53.066	ENSCVAG00000007250	shrprbck1r	59	53.066	Cyprinodon_variegatus
ENSXMAG00000022076	sharpin	91	53.922	ENSDARG00000076995	sharpin	98	53.922	Danio_rerio
ENSXMAG00000022076	sharpin	98	54.701	ENSDARG00000059871	shrprbck1r	97	54.487	Danio_rerio
ENSXMAG00000022076	sharpin	95	58.313	ENSELUG00000016022	shrprbck1r	59	58.313	Esox_lucius
ENSXMAG00000022076	sharpin	100	93.119	ENSFHEG00000013564	sharpin	99	93.119	Fundulus_heteroclitus
ENSXMAG00000022076	sharpin	84	75.926	ENSGMOG00000010123	sharpin	95	75.926	Gadus_morhua
ENSXMAG00000022076	sharpin	96	67.542	ENSGAFG00000021405	sharpin	97	67.542	Gambusia_affinis
ENSXMAG00000022076	sharpin	95	52.184	ENSGAFG00000009309	shrprbck1r	59	52.184	Gambusia_affinis
ENSXMAG00000022076	sharpin	95	56.582	ENSHBUG00000021933	shrprbck1r	59	56.582	Haplochromis_burtoni
ENSXMAG00000022076	sharpin	96	67.139	ENSHCOG00000018847	sharpin	81	66.359	Hippocampus_comes
ENSXMAG00000022076	sharpin	87	55.270	ENSIPUG00000011951	sharpin	99	55.270	Ictalurus_punctatus
ENSXMAG00000022076	sharpin	88	57.436	ENSIPUG00000014247	shrprbck1r	54	57.436	Ictalurus_punctatus
ENSXMAG00000022076	sharpin	95	53.793	ENSKMAG00000015215	shrprbck1r	60	53.425	Kryptolebias_marmoratus
ENSXMAG00000022076	sharpin	96	78.190	ENSKMAG00000015204	sharpin	77	78.190	Kryptolebias_marmoratus
ENSXMAG00000022076	sharpin	100	81.007	ENSLBEG00000016624	sharpin	99	81.007	Labrus_bergylta
ENSXMAG00000022076	sharpin	99	52.321	ENSLBEG00000016876	shrprbck1r	65	52.766	Labrus_bergylta
ENSXMAG00000022076	sharpin	90	46.059	ENSLACG00000010948	-	58	46.059	Latimeria_chalumnae
ENSXMAG00000022076	sharpin	94	60.190	ENSLOCG00000008910	shrprbck1r	59	60.613	Lepisosteus_oculatus
ENSXMAG00000022076	sharpin	81	93.103	ENSMAMG00000014645	sharpin	94	93.103	Mastacembelus_armatus
ENSXMAG00000022076	sharpin	99	50.526	ENSMAMG00000022930	shrprbck1r	65	51.789	Mastacembelus_armatus
ENSXMAG00000022076	sharpin	95	55.093	ENSMZEG00005021257	shrprbck1r	59	56.351	Maylandia_zebra
ENSXMAG00000022076	sharpin	77	82.955	ENSMMOG00000016788	sharpin	92	82.955	Mola_mola
ENSXMAG00000022076	sharpin	95	53.118	ENSMMOG00000003764	shrprbck1r	59	52.941	Mola_mola
ENSXMAG00000022076	sharpin	88	57.215	ENSMALG00000008861	shrprbck1r	55	57.215	Monopterus_albus
ENSXMAG00000022076	sharpin	59	93.103	ENSMALG00000020528	sharpin	95	93.103	Monopterus_albus
ENSXMAG00000022076	sharpin	76	61.027	ENSNBRG00000012382	sharpin	94	61.027	Neolamprologus_brichardi
ENSXMAG00000022076	sharpin	95	55.196	ENSNBRG00000002270	shrprbck1r	59	55.889	Neolamprologus_brichardi
ENSXMAG00000022076	sharpin	95	55.556	ENSONIG00000014401	shrprbck1r	59	55.684	Oreochromis_niloticus
ENSXMAG00000022076	sharpin	90	69.024	ENSONIG00000009626	-	99	69.024	Oreochromis_niloticus
ENSXMAG00000022076	sharpin	95	54.462	ENSORLG00000007392	shrprbck1r	59	54.462	Oryzias_latipes
ENSXMAG00000022076	sharpin	100	77.854	ENSORLG00000017281	sharpin	100	77.854	Oryzias_latipes
ENSXMAG00000022076	sharpin	100	78.261	ENSORLG00020000801	sharpin	100	78.261	Oryzias_latipes_hni
ENSXMAG00000022076	sharpin	95	54.691	ENSORLG00020018619	shrprbck1r	59	54.691	Oryzias_latipes_hni
ENSXMAG00000022076	sharpin	100	78.032	ENSORLG00015009860	sharpin	100	78.032	Oryzias_latipes_hsok
ENSXMAG00000022076	sharpin	95	53.226	ENSORLG00015018865	shrprbck1r	59	53.226	Oryzias_latipes_hsok
ENSXMAG00000022076	sharpin	95	54.801	ENSOMEG00000012749	shrprbck1r	59	54.801	Oryzias_melastigma
ENSXMAG00000022076	sharpin	97	57.820	ENSOMEG00000005729	sharpin	91	57.820	Oryzias_melastigma
ENSXMAG00000022076	sharpin	94	63.221	ENSPKIG00000006933	shrprbck1r	59	63.942	Paramormyrops_kingsleyae
ENSXMAG00000022076	sharpin	99	58.102	ENSPKIG00000018308	-	90	58.102	Paramormyrops_kingsleyae
ENSXMAG00000022076	sharpin	99	51.310	ENSPMGG00000013254	shrprbck1r	64	51.310	Periophthalmus_magnuspinnatus
ENSXMAG00000022076	sharpin	58	86.667	ENSPMGG00000019318	sharpin	96	86.667	Periophthalmus_magnuspinnatus
ENSXMAG00000022076	sharpin	100	97.477	ENSPFOG00000015253	sharpin	100	97.477	Poecilia_formosa
ENSXMAG00000022076	sharpin	99	50.955	ENSPFOG00000004214	shrprbck1r	97	50.955	Poecilia_formosa
ENSXMAG00000022076	sharpin	95	53.613	ENSPLAG00000020523	shrprbck1r	59	53.613	Poecilia_latipinna
ENSXMAG00000022076	sharpin	100	97.706	ENSPLAG00000000423	sharpin	100	97.706	Poecilia_latipinna
ENSXMAG00000022076	sharpin	95	53.318	ENSPMEG00000006877	shrprbck1r	59	53.318	Poecilia_mexicana
ENSXMAG00000022076	sharpin	81	84.685	ENSPMEG00000023030	sharpin	91	84.685	Poecilia_mexicana
ENSXMAG00000022076	sharpin	95	53.256	ENSPREG00000014689	shrprbck1r	59	53.256	Poecilia_reticulata
ENSXMAG00000022076	sharpin	100	97.477	ENSPREG00000009702	sharpin	100	97.477	Poecilia_reticulata
ENSXMAG00000022076	sharpin	95	55.658	ENSPNYG00000022601	shrprbck1r	59	56.351	Pundamilia_nyererei
ENSXMAG00000022076	sharpin	95	57.208	ENSPNAG00000007847	shrprbck1r	60	57.895	Pygocentrus_nattereri
ENSXMAG00000022076	sharpin	87	51.928	ENSPNAG00000002911	sharpin	99	51.928	Pygocentrus_nattereri
ENSXMAG00000022076	sharpin	95	52.516	ENSSFOG00015004028	sharpin	92	51.965	Scleropages_formosus
ENSXMAG00000022076	sharpin	95	53.725	ENSSMAG00000018085	shrprbck1r	60	54.422	Scophthalmus_maximus
ENSXMAG00000022076	sharpin	99	52.301	ENSSDUG00000002959	shrprbck1r	65	53.333	Seriola_dumerili
ENSXMAG00000022076	sharpin	95	60.482	ENSSDUG00000019039	sharpin	95	60.482	Seriola_dumerili
ENSXMAG00000022076	sharpin	99	51.789	ENSSLDG00000009026	shrprbck1r	65	52.830	Seriola_lalandi_dorsalis
ENSXMAG00000022076	sharpin	64	77.083	ENSSPAG00000021807	sharpin	92	77.083	Stegastes_partitus
ENSXMAG00000022076	sharpin	99	52.510	ENSSPAG00000016097	shrprbck1r	67	52.510	Stegastes_partitus
ENSXMAG00000022076	sharpin	95	65.060	ENSTRUG00000011046	sharpin	96	64.775	Takifugu_rubripes
ENSXMAG00000022076	sharpin	95	52.326	ENSTRUG00000006949	shrprbck1r	58	53.023	Takifugu_rubripes
ENSXMAG00000022076	sharpin	91	68.148	ENSTNIG00000008521	sharpin	98	68.148	Tetraodon_nigroviridis
ENSXMAG00000022076	sharpin	96	66.348	ENSXCOG00000015019	sharpin	98	66.348	Xiphophorus_couchianus
ENSXMAG00000022076	sharpin	95	50.682	ENSXCOG00000006701	shrprbck1r	58	50.682	Xiphophorus_couchianus
ENSXMAG00000022076	sharpin	95	50.682	ENSXMAG00000018972	shrprbck1r	58	50.682	Xiphophorus_maculatus