EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000022242 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 3118 bases
Position: chr22:20150952-20154069
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000031697	zf-C2H2	PF00096.26	5e-22	1	3
ENSXMAP00000031697	zf-C2H2	PF00096.26	5e-22	2	3
ENSXMAP00000031697	zf-C2H2	PF00096.26	5e-22	3	3
ENSXMAP00000031697	zf-met	PF12874.7	7.4e-13	1	2
ENSXMAP00000031697	zf-met	PF12874.7	7.4e-13	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000030270	-	705	-	ENSXMAP00000031697	234 (aa)	-	-

Gene Model

Click here to download ENSXMAG00000022242's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000022242's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000022242	-	74	41.429	ENSACIG00000017166	-	61	41.429	Amphilophus_citrinellus
ENSXMAG00000022242	-	71	47.561	ENSAOCG00000018579	-	67	47.561	Amphiprion_ocellaris
ENSXMAG00000022242	-	79	38.333	ENSAPEG00000019755	-	84	38.333	Amphiprion_percula
ENSXMAG00000022242	-	69	45.631	ENSAPEG00000007889	-	80	45.631	Amphiprion_percula
ENSXMAG00000022242	-	68	34.286	WBGene00021374	Y37E11B.1	87	34.459	Caenorhabditis_elegans
ENSXMAG00000022242	-	75	33.333	ENSCING00000004861	zf(c2h2)-12	70	33.333	Ciona_intestinalis
ENSXMAG00000022242	-	80	31.792	ENSCING00000000529	zf(btb/c2h2)	53	31.792	Ciona_intestinalis
ENSXMAG00000022242	-	75	35.338	ENSCSAVG00000006729	-	62	35.338	Ciona_savignyi
ENSXMAG00000022242	-	86	37.415	ENSCSAVG00000009574	-	99	37.931	Ciona_savignyi
ENSXMAG00000022242	-	84	32.402	ENSCSAVG00000005896	-	70	32.402	Ciona_savignyi
ENSXMAG00000022242	-	87	32.955	ENSCSEG00000005491	-	85	32.955	Cynoglossus_semilaevis
ENSXMAG00000022242	-	84	41.379	ENSCVAG00000002295	-	79	41.379	Cyprinodon_variegatus
ENSXMAG00000022242	-	77	37.952	ENSCVAG00000016098	-	80	37.952	Cyprinodon_variegatus
ENSXMAG00000022242	-	59	79.856	ENSCVAG00000019574	-	81	79.856	Cyprinodon_variegatus
ENSXMAG00000022242	-	79	33.880	FBgn0037722	CG8319	57	33.880	Drosophila_melanogaster
ENSXMAG00000022242	-	72	37.410	FBgn0033934	CG17385	60	37.410	Drosophila_melanogaster
ENSXMAG00000022242	-	80	40.580	ENSEBUG00000008392	-	74	41.481	Eptatretus_burgeri
ENSXMAG00000022242	-	71	52.459	ENSEBUG00000000735	-	98	52.459	Eptatretus_burgeri
ENSXMAG00000022242	-	71	50.000	ENSEBUG00000015522	-	69	50.000	Eptatretus_burgeri
ENSXMAG00000022242	-	82	40.606	ENSEBUG00000004841	-	79	40.606	Eptatretus_burgeri
ENSXMAG00000022242	-	78	37.333	ENSELUG00000020794	-	54	35.294	Esox_lucius
ENSXMAG00000022242	-	89	43.636	ENSELUG00000010454	-	58	43.636	Esox_lucius
ENSXMAG00000022242	-	78	36.364	ENSFHEG00000020889	-	74	36.364	Fundulus_heteroclitus
ENSXMAG00000022242	-	81	39.264	ENSFHEG00000012990	-	94	39.264	Fundulus_heteroclitus
ENSXMAG00000022242	-	88	39.394	ENSFHEG00000013644	-	80	43.452	Fundulus_heteroclitus
ENSXMAG00000022242	-	71	38.788	ENSFHEG00000003596	-	60	38.788	Fundulus_heteroclitus
ENSXMAG00000022242	-	75	38.095	ENSGACG00000018415	-	99	38.095	Gasterosteus_aculeatus
ENSXMAG00000022242	-	73	44.444	ENSHCOG00000014881	-	63	44.444	Hippocampus_comes
ENSXMAG00000022242	-	71	42.069	ENSHCOG00000017437	-	71	42.069	Hippocampus_comes
ENSXMAG00000022242	-	71	35.583	ENSIPUG00000013526	-	55	35.583	Ictalurus_punctatus
ENSXMAG00000022242	-	75	40.741	ENSKMAG00000012909	-	62	37.278	Kryptolebias_marmoratus
ENSXMAG00000022242	-	74	38.129	ENSKMAG00000007658	-	86	38.415	Kryptolebias_marmoratus
ENSXMAG00000022242	-	84	38.017	ENSLBEG00000026573	-	82	38.017	Labrus_bergylta
ENSXMAG00000022242	-	56	35.514	ENSMMOG00000001961	-	95	35.514	Mola_mola
ENSXMAG00000022242	-	86	60.294	ENSMALG00000000650	-	52	60.294	Monopterus_albus
ENSXMAG00000022242	-	81	37.349	ENSONIG00000003224	-	97	41.912	Oreochromis_niloticus
ENSXMAG00000022242	-	72	39.855	ENSONIG00000003471	-	100	39.855	Oreochromis_niloticus
ENSXMAG00000022242	-	80	37.143	ENSONIG00000016416	-	97	37.143	Oreochromis_niloticus
ENSXMAG00000022242	-	86	40.566	ENSONIG00000007812	-	99	40.541	Oreochromis_niloticus
ENSXMAG00000022242	-	70	37.423	ENSONIG00000009894	-	98	37.423	Oreochromis_niloticus
ENSXMAG00000022242	-	73	52.830	ENSORLG00015018254	-	89	52.830	Oryzias_latipes_hsok
ENSXMAG00000022242	-	86	37.162	ENSOMEG00000017673	-	74	37.162	Oryzias_melastigma
ENSXMAG00000022242	-	89	36.029	ENSPMGG00000000458	-	88	50.000	Periophthalmus_magnuspinnatus
ENSXMAG00000022242	-	58	43.066	ENSPMGG00000000489	-	69	43.066	Periophthalmus_magnuspinnatus
ENSXMAG00000022242	-	87	35.616	ENSPMGG00000010563	-	80	35.616	Periophthalmus_magnuspinnatus
ENSXMAG00000022242	-	72	53.704	ENSPMGG00000022524	-	95	46.789	Periophthalmus_magnuspinnatus
ENSXMAG00000022242	-	77	45.000	ENSPMGG00000010664	-	96	45.000	Periophthalmus_magnuspinnatus
ENSXMAG00000022242	-	74	42.105	ENSPMGG00000000243	-	73	35.393	Periophthalmus_magnuspinnatus
ENSXMAG00000022242	-	74	34.969	ENSPMGG00000019842	-	68	35.404	Periophthalmus_magnuspinnatus
ENSXMAG00000022242	-	71	40.244	ENSPMGG00000000218	-	62	38.462	Periophthalmus_magnuspinnatus
ENSXMAG00000022242	-	71	34.884	ENSPMGG00000012289	-	68	34.884	Periophthalmus_magnuspinnatus
ENSXMAG00000022242	-	76	30.769	ENSPMGG00000013602	-	58	30.058	Periophthalmus_magnuspinnatus
ENSXMAG00000022242	-	78	38.961	ENSPMAG00000007983	-	97	37.762	Petromyzon_marinus
ENSXMAG00000022242	-	89	36.429	ENSPFOG00000020691	-	87	33.649	Poecilia_formosa
ENSXMAG00000022242	-	83	43.860	ENSPFOG00000002879	-	99	43.860	Poecilia_formosa
ENSXMAG00000022242	-	79	96.757	ENSPLAG00000011254	-	62	96.757	Poecilia_latipinna
ENSXMAG00000022242	-	89	40.606	ENSPLAG00000006174	-	77	40.606	Poecilia_latipinna
ENSXMAG00000022242	-	96	90.667	ENSPMEG00000007503	-	76	90.667	Poecilia_mexicana
ENSXMAG00000022242	-	71	37.126	ENSPMEG00000019229	-	65	37.126	Poecilia_mexicana
ENSXMAG00000022242	-	78	46.875	ENSPMEG00000022676	-	99	46.875	Poecilia_mexicana
ENSXMAG00000022242	-	96	91.111	ENSPREG00000015352	-	75	91.111	Poecilia_reticulata
ENSXMAG00000022242	-	83	38.095	ENSPREG00000016204	-	72	38.095	Poecilia_reticulata
ENSXMAG00000022242	-	71	36.527	ENSPREG00000007146	-	56	36.527	Poecilia_reticulata
ENSXMAG00000022242	-	100	45.098	ENSPNAG00000025211	-	55	45.098	Pygocentrus_nattereri
ENSXMAG00000022242	-	88	37.209	ENSSMAG00000001359	-	96	37.209	Scophthalmus_maximus
ENSXMAG00000022242	-	81	35.780	ENSSDUG00000000871	-	56	35.780	Seriola_dumerili
ENSXMAG00000022242	-	89	42.975	ENSSDUG00000000946	-	95	49.383	Seriola_dumerili
ENSXMAG00000022242	-	74	42.029	ENSSLDG00000002515	-	61	42.029	Seriola_lalandi_dorsalis
ENSXMAG00000022242	-	72	35.374	ENSSLDG00000000464	-	53	35.374	Seriola_lalandi_dorsalis
ENSXMAG00000022242	-	83	39.326	ENSTNIG00000008154	-	88	39.326	Tetraodon_nigroviridis
ENSXMAG00000022242	-	70	35.659	ENSXCOG00000005697	-	93	35.659	Xiphophorus_couchianus