EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000022273 (Gene tree)
Gene ID: 102217983
Gene Symbol: c1d
Alias: zgc:103509
Full Name: C1D nuclear receptor corepressor
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 9475 bases
Position: chr22:22784961-22794435
Accession: 102217983
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000018226	Sas10_Utp3	PF04000.15	5e-18	1	1
ENSXMAP00000028403	Sas10_Utp3	PF04000.15	5e-18	1	1
ENSXMAP00000032916	Sas10_Utp3	PF04000.15	5e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000029577	-	5428	XM_005815077	ENSXMAP00000028403	154 (aa)	XP_005815134	UPI000293A83B
ENSXMAT00000018253	-	2093	-	ENSXMAP00000018226	154 (aa)	-	M4AUT1
ENSXMAT00000037812	-	5673	-	ENSXMAP00000032916	154 (aa)	-	UPI000293A83B

Gene Model

Click here to download ENSXMAG00000022273's gene model file

Pathways

Pathway ID	Pathway Name	Source
xma03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000022273's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000022273	c1d	88	63.235	ENSG00000197223	C1D	89	65.600	Homo_sapiens
ENSXMAG00000022273	c1d	100	80.000	ENSAPOG00000005466	c1d	100	79.355	Acanthochromis_polyacanthus
ENSXMAG00000022273	c1d	88	63.971	ENSAMEG00000004859	C1D	86	66.400	Ailuropoda_melanoleuca
ENSXMAG00000022273	c1d	88	81.618	ENSACIG00000012684	c1d	82	85.039	Amphilophus_citrinellus
ENSXMAG00000022273	c1d	99	79.739	ENSAOCG00000020354	c1d	99	79.085	Amphiprion_ocellaris
ENSXMAG00000022273	c1d	99	79.085	ENSAPEG00000001403	c1d	99	78.431	Amphiprion_percula
ENSXMAG00000022273	c1d	99	77.922	ENSATEG00000012922	c1d	99	77.922	Anabas_testudineus
ENSXMAG00000022273	c1d	86	62.121	ENSAPLG00000009320	C1D	81	66.102	Anas_platyrhynchos
ENSXMAG00000022273	c1d	77	70.339	ENSACAG00000001337	C1D	97	70.339	Anolis_carolinensis
ENSXMAG00000022273	c1d	88	59.559	ENSANAG00000005773	-	89	61.600	Aotus_nancymaae
ENSXMAG00000022273	c1d	88	62.500	ENSANAG00000035972	-	89	64.800	Aotus_nancymaae
ENSXMAG00000022273	c1d	99	73.684	ENSACLG00000026206	c1d	99	77.632	Astatotilapia_calliptera
ENSXMAG00000022273	c1d	97	69.128	ENSAMXG00000043212	c1d	99	67.114	Astyanax_mexicanus
ENSXMAG00000022273	c1d	88	63.971	ENSBTAG00000049002	C1D	89	66.400	Bos_taurus
ENSXMAG00000022273	c1d	88	63.235	ENSCJAG00000006589	C1D	82	65.600	Callithrix_jacchus
ENSXMAG00000022273	c1d	72	63.063	ENSCJAG00000044668	-	91	60.345	Callithrix_jacchus
ENSXMAG00000022273	c1d	88	65.441	ENSCAFG00000030099	C1D	89	67.200	Canis_familiaris
ENSXMAG00000022273	c1d	88	65.441	ENSCAFG00020026997	C1D	89	67.200	Canis_lupus_dingo
ENSXMAG00000022273	c1d	88	63.971	ENSCHIG00000025729	C1D	89	66.400	Capra_hircus
ENSXMAG00000022273	c1d	88	63.971	ENSTSYG00000035739	-	89	66.400	Carlito_syrichta
ENSXMAG00000022273	c1d	73	65.179	ENSTSYG00000026573	-	71	65.179	Carlito_syrichta
ENSXMAG00000022273	c1d	73	61.062	ENSCAPG00000011523	-	94	61.062	Cavia_aperea
ENSXMAG00000022273	c1d	88	64.706	ENSCPOG00000037986	-	89	67.200	Cavia_porcellus
ENSXMAG00000022273	c1d	73	61.947	ENSCPOG00000020112	-	94	61.947	Cavia_porcellus
ENSXMAG00000022273	c1d	88	63.235	ENSCCAG00000030405	-	89	65.600	Cebus_capucinus
ENSXMAG00000022273	c1d	88	63.235	ENSCATG00000043348	-	89	65.600	Cercocebus_atys
ENSXMAG00000022273	c1d	88	62.500	ENSCATG00000045336	C1D	89	65.600	Cercocebus_atys
ENSXMAG00000022273	c1d	88	64.706	ENSCLAG00000011883	C1D	89	66.400	Chinchilla_lanigera
ENSXMAG00000022273	c1d	88	62.500	ENSCSAG00000014811	C1D	89	65.600	Chlorocebus_sabaeus
ENSXMAG00000022273	c1d	88	64.706	ENSCHOG00000006719	C1D	70	66.400	Choloepus_hoffmanni
ENSXMAG00000022273	c1d	77	66.102	ENSCPBG00000014451	C1D	80	66.102	Chrysemys_picta_bellii
ENSXMAG00000022273	c1d	77	47.458	ENSCING00000020906	-	64	48.361	Ciona_intestinalis
ENSXMAG00000022273	c1d	78	45.833	ENSCSAVG00000000150	-	69	45.833	Ciona_savignyi
ENSXMAG00000022273	c1d	69	66.355	ENSCANG00000036599	-	87	66.355	Colobus_angolensis_palliatus
ENSXMAG00000022273	c1d	88	61.765	ENSCANG00000035564	C1D	89	64.800	Colobus_angolensis_palliatus
ENSXMAG00000022273	c1d	88	63.235	ENSCGRG00001023376	C1d	89	66.400	Cricetulus_griseus_chok1gshd
ENSXMAG00000022273	c1d	88	63.235	ENSCGRG00000010245	C1d	89	66.400	Cricetulus_griseus_crigri
ENSXMAG00000022273	c1d	100	75.484	ENSCSEG00000000587	c1d	100	75.484	Cynoglossus_semilaevis
ENSXMAG00000022273	c1d	100	87.662	ENSCVAG00000004603	c1d	100	87.662	Cyprinodon_variegatus
ENSXMAG00000022273	c1d	80	66.667	ENSDARG00000021112	c1d	86	66.929	Danio_rerio
ENSXMAG00000022273	c1d	88	57.353	ENSDNOG00000046068	-	89	58.400	Dasypus_novemcinctus
ENSXMAG00000022273	c1d	88	62.500	ENSDORG00000003300	C1d	89	64.800	Dipodomys_ordii
ENSXMAG00000022273	c1d	58	70.000	ENSETEG00000014857	C1D	83	74.684	Echinops_telfairi
ENSXMAG00000022273	c1d	81	52.000	ENSEBUG00000006874	c1d	78	52.419	Eptatretus_burgeri
ENSXMAG00000022273	c1d	88	63.971	ENSEASG00005007307	C1D	81	66.400	Equus_asinus_asinus
ENSXMAG00000022273	c1d	88	63.971	ENSECAG00000002187	C1D	89	66.400	Equus_caballus
ENSXMAG00000022273	c1d	85	73.282	ENSELUG00000014823	c1d	87	74.016	Esox_lucius
ENSXMAG00000022273	c1d	88	63.971	ENSFCAG00000028933	C1D	89	66.400	Felis_catus
ENSXMAG00000022273	c1d	84	63.910	ENSFALG00000013640	C1D	72	67.227	Ficedula_albicollis
ENSXMAG00000022273	c1d	88	63.971	ENSFDAG00000010462	-	89	66.400	Fukomys_damarensis
ENSXMAG00000022273	c1d	88	51.095	ENSFDAG00000014175	-	87	52.381	Fukomys_damarensis
ENSXMAG00000022273	c1d	100	86.364	ENSFHEG00000010545	c1d	100	86.364	Fundulus_heteroclitus
ENSXMAG00000022273	c1d	80	71.545	ENSGMOG00000013911	-	98	71.545	Gadus_morhua
ENSXMAG00000022273	c1d	82	65.079	ENSGALG00000008765	C1D	88	65.079	Gallus_gallus
ENSXMAG00000022273	c1d	100	93.590	ENSGAFG00000012578	c1d	100	93.590	Gambusia_affinis
ENSXMAG00000022273	c1d	83	76.562	ENSGACG00000011981	c1d	98	77.778	Gasterosteus_aculeatus
ENSXMAG00000022273	c1d	77	65.254	ENSGAGG00000013383	C1D	80	65.254	Gopherus_agassizii
ENSXMAG00000022273	c1d	89	60.584	ENSGGOG00000025808	-	71	63.200	Gorilla_gorilla
ENSXMAG00000022273	c1d	88	63.235	ENSGGOG00000025982	-	69	65.600	Gorilla_gorilla
ENSXMAG00000022273	c1d	88	61.029	ENSGGOG00000022296	-	89	63.200	Gorilla_gorilla
ENSXMAG00000022273	c1d	95	76.027	ENSHBUG00000018531	c1d	85	80.137	Haplochromis_burtoni
ENSXMAG00000022273	c1d	88	60.294	ENSHGLG00000021219	-	87	63.934	Heterocephalus_glaber_female
ENSXMAG00000022273	c1d	84	64.615	ENSHGLG00000012332	-	89	66.400	Heterocephalus_glaber_female
ENSXMAG00000022273	c1d	88	61.029	ENSHGLG00100019951	-	87	64.754	Heterocephalus_glaber_male
ENSXMAG00000022273	c1d	88	62.500	ENSHGLG00100000221	-	89	65.600	Heterocephalus_glaber_male
ENSXMAG00000022273	c1d	95	71.812	ENSHCOG00000014568	C1D	99	71.141	Hippocampus_comes
ENSXMAG00000022273	c1d	95	71.812	ENSHCOG00000014589	c1d	99	71.141	Hippocampus_comes
ENSXMAG00000022273	c1d	84	65.891	ENSIPUG00000018661	c1d	80	70.690	Ictalurus_punctatus
ENSXMAG00000022273	c1d	88	63.235	ENSSTOG00000012346	C1D	89	65.600	Ictidomys_tridecemlineatus
ENSXMAG00000022273	c1d	89	51.825	ENSJJAG00000016086	-	88	54.032	Jaculus_jaculus
ENSXMAG00000022273	c1d	81	61.240	ENSJJAG00000023186	-	98	61.240	Jaculus_jaculus
ENSXMAG00000022273	c1d	89	56.934	ENSJJAG00000005044	-	91	59.200	Jaculus_jaculus
ENSXMAG00000022273	c1d	89	60.584	ENSJJAG00000009540	-	91	63.200	Jaculus_jaculus
ENSXMAG00000022273	c1d	100	83.117	ENSKMAG00000015077	c1d	100	83.117	Kryptolebias_marmoratus
ENSXMAG00000022273	c1d	100	78.065	ENSLBEG00000008351	c1d	100	77.419	Labrus_bergylta
ENSXMAG00000022273	c1d	88	63.043	ENSLACG00000007516	C1D	82	68.852	Latimeria_chalumnae
ENSXMAG00000022273	c1d	95	62.585	ENSLOCG00000016024	c1d	95	62.585	Lepisosteus_oculatus
ENSXMAG00000022273	c1d	88	63.235	ENSLAFG00000002083	C1D	89	65.600	Loxodonta_africana
ENSXMAG00000022273	c1d	88	62.500	ENSMFAG00000034261	C1D	89	65.600	Macaca_fascicularis
ENSXMAG00000022273	c1d	88	63.235	ENSMFAG00000034034	-	89	65.600	Macaca_fascicularis
ENSXMAG00000022273	c1d	88	61.029	ENSMFAG00000028681	-	89	64.000	Macaca_fascicularis
ENSXMAG00000022273	c1d	88	62.500	ENSMMUG00000041557	C1D	90	65.600	Macaca_mulatta
ENSXMAG00000022273	c1d	88	61.029	ENSMMUG00000017209	-	89	64.000	Macaca_mulatta
ENSXMAG00000022273	c1d	88	62.500	ENSMMUG00000043184	-	89	64.800	Macaca_mulatta
ENSXMAG00000022273	c1d	88	63.235	ENSMNEG00000020626	-	89	65.600	Macaca_nemestrina
ENSXMAG00000022273	c1d	88	62.500	ENSMNEG00000040612	C1D	89	65.600	Macaca_nemestrina
ENSXMAG00000022273	c1d	88	63.235	ENSMLEG00000028412	-	89	65.600	Mandrillus_leucophaeus
ENSXMAG00000022273	c1d	88	62.500	ENSMLEG00000027619	C1D	89	65.600	Mandrillus_leucophaeus
ENSXMAG00000022273	c1d	100	78.710	ENSMAMG00000022156	c1d	100	78.710	Mastacembelus_armatus
ENSXMAG00000022273	c1d	95	76.027	ENSMZEG00005027343	c1d	97	80.137	Maylandia_zebra
ENSXMAG00000022273	c1d	89	61.429	ENSMGAG00000004517	C1D	89	64.286	Meleagris_gallopavo
ENSXMAG00000022273	c1d	88	63.971	ENSMAUG00000008974	C1d	89	66.400	Mesocricetus_auratus
ENSXMAG00000022273	c1d	88	63.971	ENSMICG00000032141	C1D	89	66.400	Microcebus_murinus
ENSXMAG00000022273	c1d	88	63.235	ENSMOCG00000010860	C1d	89	66.400	Microtus_ochrogaster
ENSXMAG00000022273	c1d	96	75.333	ENSMMOG00000007332	c1d	82	79.528	Mola_mola
ENSXMAG00000022273	c1d	84	62.016	ENSMODG00000003561	C1D	82	66.667	Monodelphis_domestica
ENSXMAG00000022273	c1d	100	77.273	ENSMALG00000020864	c1d	95	83.200	Monopterus_albus
ENSXMAG00000022273	c1d	88	63.971	MGP_CAROLIEiJ_G0016110	C1d	100	67.797	Mus_caroli
ENSXMAG00000022273	c1d	88	63.971	ENSMUSG00000000581	C1d	100	67.797	Mus_musculus
ENSXMAG00000022273	c1d	88	65.441	MGP_PahariEiJ_G0016781	C1d	100	68.644	Mus_pahari
ENSXMAG00000022273	c1d	88	63.971	MGP_SPRETEiJ_G0016952	C1d	100	67.797	Mus_spretus
ENSXMAG00000022273	c1d	88	64.706	ENSMPUG00000006224	C1D	89	67.200	Mustela_putorius_furo
ENSXMAG00000022273	c1d	88	63.971	ENSMLUG00000024947	-	89	65.600	Myotis_lucifugus
ENSXMAG00000022273	c1d	88	65.441	ENSMLUG00000010791	-	89	67.200	Myotis_lucifugus
ENSXMAG00000022273	c1d	88	63.971	ENSMLUG00000029990	-	89	65.600	Myotis_lucifugus
ENSXMAG00000022273	c1d	88	61.029	ENSNGAG00000011872	-	89	63.200	Nannospalax_galili
ENSXMAG00000022273	c1d	79	59.504	ENSNGAG00000012482	-	87	62.727	Nannospalax_galili
ENSXMAG00000022273	c1d	88	58.824	ENSNGAG00000016675	-	89	60.800	Nannospalax_galili
ENSXMAG00000022273	c1d	99	72.549	ENSNBRG00000010704	c1d	97	79.452	Neolamprologus_brichardi
ENSXMAG00000022273	c1d	88	63.235	ENSNLEG00000032919	-	69	65.600	Nomascus_leucogenys
ENSXMAG00000022273	c1d	88	62.500	ENSOPRG00000009586	C1D	89	65.600	Ochotona_princeps
ENSXMAG00000022273	c1d	88	63.235	ENSODEG00000018885	-	90	66.400	Octodon_degus
ENSXMAG00000022273	c1d	88	63.235	ENSODEG00000011242	-	89	66.400	Octodon_degus
ENSXMAG00000022273	c1d	88	54.412	ENSODEG00000018525	-	86	59.504	Octodon_degus
ENSXMAG00000022273	c1d	99	79.739	ENSONIG00000001233	c1d	99	79.739	Oreochromis_niloticus
ENSXMAG00000022273	c1d	62	75.789	ENSOANG00000008385	C1D	86	75.789	Ornithorhynchus_anatinus
ENSXMAG00000022273	c1d	88	62.500	ENSOCUG00000009771	-	89	64.000	Oryctolagus_cuniculus
ENSXMAG00000022273	c1d	88	62.500	ENSOCUG00000025587	-	89	64.000	Oryctolagus_cuniculus
ENSXMAG00000022273	c1d	99	75.325	ENSORLG00000021968	c1d	99	74.675	Oryzias_latipes
ENSXMAG00000022273	c1d	97	76.821	ENSORLG00020000507	c1d	98	76.159	Oryzias_latipes_hni
ENSXMAG00000022273	c1d	99	76.129	ENSORLG00015004594	c1d	99	75.484	Oryzias_latipes_hsok
ENSXMAG00000022273	c1d	99	75.974	ENSOMEG00000004672	c1d	99	75.325	Oryzias_melastigma
ENSXMAG00000022273	c1d	88	62.500	ENSOGAG00000027934	-	89	64.800	Otolemur_garnettii
ENSXMAG00000022273	c1d	88	63.971	ENSOARG00000019931	C1D	88	66.400	Ovis_aries
ENSXMAG00000022273	c1d	88	60.294	ENSPPAG00000040091	-	72	62.400	Pan_paniscus
ENSXMAG00000022273	c1d	88	63.235	ENSPPAG00000037847	-	89	65.600	Pan_paniscus
ENSXMAG00000022273	c1d	88	63.971	ENSPPRG00000017045	-	89	66.400	Panthera_pardus
ENSXMAG00000022273	c1d	88	41.176	ENSPPRG00000022830	-	86	41.600	Panthera_pardus
ENSXMAG00000022273	c1d	88	63.971	ENSPTIG00000009414	C1D	89	66.400	Panthera_tigris_altaica
ENSXMAG00000022273	c1d	88	63.235	ENSPTRG00000023558	C1D	89	65.600	Pan_troglodytes
ENSXMAG00000022273	c1d	88	62.500	ENSPANG00000002886	C1D	69	65.600	Papio_anubis
ENSXMAG00000022273	c1d	88	63.971	ENSPANG00000000501	-	89	66.400	Papio_anubis
ENSXMAG00000022273	c1d	94	61.111	ENSPKIG00000004877	c1d	79	68.644	Paramormyrops_kingsleyae
ENSXMAG00000022273	c1d	77	67.797	ENSPSIG00000010015	C1D	81	67.797	Pelodiscus_sinensis
ENSXMAG00000022273	c1d	100	77.419	ENSPMGG00000009326	c1d	100	77.419	Periophthalmus_magnuspinnatus
ENSXMAG00000022273	c1d	84	62.791	ENSPCIG00000018629	-	82	67.521	Phascolarctos_cinereus
ENSXMAG00000022273	c1d	92	54.610	ENSPCIG00000006831	-	86	60.484	Phascolarctos_cinereus
ENSXMAG00000022273	c1d	100	96.104	ENSPFOG00000003686	c1d	100	96.104	Poecilia_formosa
ENSXMAG00000022273	c1d	100	96.104	ENSPLAG00000000228	c1d	100	96.104	Poecilia_latipinna
ENSXMAG00000022273	c1d	100	96.104	ENSPMEG00000023213	c1d	100	96.104	Poecilia_mexicana
ENSXMAG00000022273	c1d	100	95.455	ENSPREG00000000742	c1d	100	95.455	Poecilia_reticulata
ENSXMAG00000022273	c1d	88	61.029	ENSPPYG00000002294	-	89	63.200	Pongo_abelii
ENSXMAG00000022273	c1d	88	63.235	ENSPPYG00000012354	C1D	69	65.600	Pongo_abelii
ENSXMAG00000022273	c1d	88	52.206	ENSPCAG00000010088	C1D	70	55.200	Procavia_capensis
ENSXMAG00000022273	c1d	88	63.971	ENSPCOG00000016112	C1D	89	66.400	Propithecus_coquereli
ENSXMAG00000022273	c1d	88	63.971	ENSPVAG00000012692	C1D	70	66.400	Pteropus_vampyrus
ENSXMAG00000022273	c1d	95	76.027	ENSPNYG00000008789	c1d	97	80.137	Pundamilia_nyererei
ENSXMAG00000022273	c1d	97	64.430	ENSPNAG00000004219	c1d	99	64.430	Pygocentrus_nattereri
ENSXMAG00000022273	c1d	88	63.971	ENSRNOG00000005982	C1d	89	66.400	Rattus_norvegicus
ENSXMAG00000022273	c1d	89	62.044	ENSRBIG00000026211	-	89	64.800	Rhinopithecus_bieti
ENSXMAG00000022273	c1d	89	62.774	ENSRROG00000005944	-	89	65.600	Rhinopithecus_roxellana
ENSXMAG00000022273	c1d	88	62.500	ENSRROG00000029013	C1D	89	65.600	Rhinopithecus_roxellana
ENSXMAG00000022273	c1d	88	63.235	ENSSBOG00000025275	C1D	89	65.600	Saimiri_boliviensis_boliviensis
ENSXMAG00000022273	c1d	84	63.566	ENSSHAG00000008352	C1D	56	68.376	Sarcophilus_harrisii
ENSXMAG00000022273	c1d	89	66.423	ENSSFOG00015010861	c1d	91	70.866	Scleropages_formosus
ENSXMAG00000022273	c1d	100	76.774	ENSSMAG00000019230	c1d	100	75.484	Scophthalmus_maximus
ENSXMAG00000022273	c1d	100	81.290	ENSSDUG00000020213	c1d	100	81.290	Seriola_dumerili
ENSXMAG00000022273	c1d	100	80.645	ENSSLDG00000017371	c1d	100	80.645	Seriola_lalandi_dorsalis
ENSXMAG00000022273	c1d	78	66.667	ENSSPUG00000006525	C1D	82	66.667	Sphenodon_punctatus
ENSXMAG00000022273	c1d	99	80.392	ENSSPAG00000008574	c1d	99	80.392	Stegastes_partitus
ENSXMAG00000022273	c1d	69	61.321	ENSSSCG00000035701	-	88	61.321	Sus_scrofa
ENSXMAG00000022273	c1d	88	63.971	ENSSSCG00000039331	-	89	66.400	Sus_scrofa
ENSXMAG00000022273	c1d	77	68.067	ENSTGUG00000002367	C1D	83	68.067	Taeniopygia_guttata
ENSXMAG00000022273	c1d	97	72.000	ENSTRUG00000012245	c1d	77	77.165	Takifugu_rubripes
ENSXMAG00000022273	c1d	95	74.830	ENSTNIG00000009827	c1d	86	81.102	Tetraodon_nigroviridis
ENSXMAG00000022273	c1d	89	63.504	ENSTBEG00000009797	C1D	89	66.400	Tupaia_belangeri
ENSXMAG00000022273	c1d	88	63.235	ENSTTRG00000013982	C1D	72	65.600	Tursiops_truncatus
ENSXMAG00000022273	c1d	88	56.115	ENSUAMG00000025246	C1D	88	57.812	Ursus_americanus
ENSXMAG00000022273	c1d	66	53.333	ENSUMAG00000006451	-	91	54.386	Ursus_maritimus
ENSXMAG00000022273	c1d	88	63.971	ENSUMAG00000021118	-	89	66.400	Ursus_maritimus
ENSXMAG00000022273	c1d	88	65.441	ENSVPAG00000012080	C1D	70	68.000	Vicugna_pacos
ENSXMAG00000022273	c1d	88	65.441	ENSVVUG00000027629	C1D	78	67.200	Vulpes_vulpes
ENSXMAG00000022273	c1d	82	66.142	ENSXETG00000025934	c1d	82	68.908	Xenopus_tropicalis
ENSXMAG00000022273	c1d	100	99.351	ENSXCOG00000013813	c1d	100	99.351	Xiphophorus_couchianus