EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000022364 (Gene tree)
Gene ID: 102233646
Gene Symbol: zgc:66448
Alias: fi06b05|wu:fi06b05
Full Name: zinc finger protein 628-like
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 11929 bases
Position: chr3:13647072-13659000
Accession: 102233646
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000033626	zf-C2H2	PF00096.26	1.9e-47	1	7
ENSXMAP00000033626	zf-C2H2	PF00096.26	1.9e-47	2	7
ENSXMAP00000033626	zf-C2H2	PF00096.26	1.9e-47	3	7
ENSXMAP00000033626	zf-C2H2	PF00096.26	1.9e-47	4	7
ENSXMAP00000033626	zf-C2H2	PF00096.26	1.9e-47	5	7
ENSXMAP00000033626	zf-C2H2	PF00096.26	1.9e-47	6	7
ENSXMAP00000033626	zf-C2H2	PF00096.26	1.9e-47	7	7
ENSXMAP00000033626	zf-met	PF12874.7	5e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000032805	-	6053	XM_023331252	ENSXMAP00000033626	1278 (aa)	XP_023187020	UPI000C6DFD69

Gene Model

Click here to download ENSXMAG00000022364's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000022364's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000022364	zgc:66448	53	39.634	ENSAMEG00000007611	-	100	37.028	Ailuropoda_melanoleuca
ENSXMAG00000022364	zgc:66448	51	41.420	ENSACIG00000006172	-	91	39.759	Amphilophus_citrinellus
ENSXMAG00000022364	zgc:66448	53	36.126	ENSAPEG00000004486	-	97	41.176	Amphiprion_percula
ENSXMAG00000022364	zgc:66448	52	30.000	ENSAPEG00000016118	-	97	39.189	Amphiprion_percula
ENSXMAG00000022364	zgc:66448	53	44.242	ENSACLG00000000537	-	93	42.077	Astatotilapia_calliptera
ENSXMAG00000022364	zgc:66448	61	54.160	ENSAMXG00000036663	zgc:66448	85	46.939	Astyanax_mexicanus
ENSXMAG00000022364	zgc:66448	55	43.443	ENSCSAVG00000004499	-	99	43.443	Ciona_savignyi
ENSXMAG00000022364	zgc:66448	58	40.741	ENSCSAVG00000008862	-	99	50.000	Ciona_savignyi
ENSXMAG00000022364	zgc:66448	57	45.111	ENSDARG00000022952	zgc:66448	54	45.032	Danio_rerio
ENSXMAG00000022364	zgc:66448	55	34.804	ENSELUG00000021499	-	96	33.955	Esox_lucius
ENSXMAG00000022364	zgc:66448	50	30.684	ENSELUG00000021355	-	96	31.161	Esox_lucius
ENSXMAG00000022364	zgc:66448	100	95.618	ENSGAFG00000003391	zgc:66448	100	95.227	Gambusia_affinis
ENSXMAG00000022364	zgc:66448	85	47.059	ENSIPUG00000002548	zgc:66448	88	41.032	Ictalurus_punctatus
ENSXMAG00000022364	zgc:66448	100	69.796	ENSKMAG00000014091	zgc:66448	100	69.470	Kryptolebias_marmoratus
ENSXMAG00000022364	zgc:66448	51	38.095	ENSLBEG00000013570	-	96	38.428	Labrus_bergylta
ENSXMAG00000022364	zgc:66448	52	42.012	ENSMZEG00005014355	-	97	42.236	Maylandia_zebra
ENSXMAG00000022364	zgc:66448	50	30.450	ENSONIG00000017674	-	94	37.004	Oreochromis_niloticus
ENSXMAG00000022364	zgc:66448	55	32.114	ENSONIG00000018189	-	95	35.714	Oreochromis_niloticus
ENSXMAG00000022364	zgc:66448	51	39.597	ENSONIG00000011974	-	99	39.597	Oreochromis_niloticus
ENSXMAG00000022364	zgc:66448	100	61.608	ENSORLG00015018781	zgc:66448	100	61.533	Oryzias_latipes_hsok
ENSXMAG00000022364	zgc:66448	100	61.224	ENSOMEG00000010575	zgc:66448	100	61.836	Oryzias_melastigma
ENSXMAG00000022364	zgc:66448	100	64.042	ENSSMAG00000001305	zgc:66448	100	63.740	Scophthalmus_maximus
ENSXMAG00000022364	zgc:66448	50	45.763	ENSSDUG00000009601	-	90	40.517	Seriola_dumerili