EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000022366 (Gene tree)
Gene ID: 102229922
Gene Symbol: RCL1
Alias: zgc:109921
Full Name: RNA terminal phosphate cyclase like 1
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 11218 bases
Position: chr8:8880077-8891294
Accession: 102229922
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000023017	RTC	PF01137.21	1.9e-58	1	1
ENSXMAP00000023017	RTC_insert	PF05189.13	1.3e-36	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000035121	-	4126	XM_005799657	ENSXMAP00000023017	372 (aa)	XP_005799714	M3ZGT2

Gene Model

Click here to download ENSXMAG00000022366's gene model file

Pathways

Pathway ID	Pathway Name	Source
xma03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000022366's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000022366	RCL1	99	79.189	ENSG00000120158	RCL1	100	81.481	Homo_sapiens
ENSXMAG00000022366	RCL1	100	92.473	ENSAPOG00000015666	rcl1	100	92.473	Acanthochromis_polyacanthus
ENSXMAG00000022366	RCL1	99	80.270	ENSAMEG00000002631	RCL1	99	80.270	Ailuropoda_melanoleuca
ENSXMAG00000022366	RCL1	100	91.398	ENSACIG00000021195	rcl1	100	91.398	Amphilophus_citrinellus
ENSXMAG00000022366	RCL1	100	91.935	ENSAOCG00000002223	rcl1	100	91.935	Amphiprion_ocellaris
ENSXMAG00000022366	RCL1	100	92.473	ENSAPEG00000006905	rcl1	100	92.473	Amphiprion_percula
ENSXMAG00000022366	RCL1	100	89.785	ENSATEG00000020026	rcl1	100	89.785	Anabas_testudineus
ENSXMAG00000022366	RCL1	88	76.596	ENSAPLG00000006031	RCL1	100	76.596	Anas_platyrhynchos
ENSXMAG00000022366	RCL1	99	73.784	ENSACAG00000003640	RCL1	99	73.784	Anolis_carolinensis
ENSXMAG00000022366	RCL1	99	78.649	ENSANAG00000037372	RCL1	99	78.649	Aotus_nancymaae
ENSXMAG00000022366	RCL1	100	91.398	ENSACLG00000021724	rcl1	100	91.398	Astatotilapia_calliptera
ENSXMAG00000022366	RCL1	99	83.152	ENSAMXG00000033394	rcl1	99	83.152	Astyanax_mexicanus
ENSXMAG00000022366	RCL1	99	46.296	WBGene00022852	ZK1127.5	99	46.296	Caenorhabditis_elegans
ENSXMAG00000022366	RCL1	99	78.919	ENSCJAG00000011202	RCL1	99	78.919	Callithrix_jacchus
ENSXMAG00000022366	RCL1	99	80.270	ENSCAFG00000002091	RCL1	99	80.270	Canis_familiaris
ENSXMAG00000022366	RCL1	99	80.270	ENSCAFG00020000638	RCL1	77	80.270	Canis_lupus_dingo
ENSXMAG00000022366	RCL1	99	78.919	ENSCHIG00000012407	RCL1	99	78.919	Capra_hircus
ENSXMAG00000022366	RCL1	88	80.793	ENSTSYG00000009592	RCL1	97	81.868	Carlito_syrichta
ENSXMAG00000022366	RCL1	66	69.753	ENSCAPG00000013575	RCL1	100	69.753	Cavia_aperea
ENSXMAG00000022366	RCL1	99	79.189	ENSCPOG00000015354	RCL1	99	79.189	Cavia_porcellus
ENSXMAG00000022366	RCL1	99	78.919	ENSCCAG00000033505	RCL1	99	78.919	Cebus_capucinus
ENSXMAG00000022366	RCL1	99	78.919	ENSCATG00000034721	RCL1	99	78.919	Cercocebus_atys
ENSXMAG00000022366	RCL1	99	79.189	ENSCLAG00000007445	RCL1	99	79.189	Chinchilla_lanigera
ENSXMAG00000022366	RCL1	99	78.919	ENSCSAG00000008811	RCL1	99	78.919	Chlorocebus_sabaeus
ENSXMAG00000022366	RCL1	86	69.279	ENSCHOG00000007216	RCL1	99	69.279	Choloepus_hoffmanni
ENSXMAG00000022366	RCL1	100	75.936	ENSCPBG00000025481	RCL1	94	76.970	Chrysemys_picta_bellii
ENSXMAG00000022366	RCL1	99	59.189	ENSCING00000019565	-	98	59.189	Ciona_intestinalis
ENSXMAG00000022366	RCL1	99	78.919	ENSCANG00000027099	RCL1	99	78.919	Colobus_angolensis_palliatus
ENSXMAG00000022366	RCL1	99	79.459	ENSCGRG00001013748	Rcl1	99	79.459	Cricetulus_griseus_chok1gshd
ENSXMAG00000022366	RCL1	88	80.243	ENSCGRG00000005843	Rcl1	99	80.243	Cricetulus_griseus_crigri
ENSXMAG00000022366	RCL1	100	89.247	ENSCSEG00000000712	rcl1	98	89.247	Cynoglossus_semilaevis
ENSXMAG00000022366	RCL1	100	95.161	ENSCVAG00000011536	rcl1	100	95.161	Cyprinodon_variegatus
ENSXMAG00000022366	RCL1	99	81.471	ENSDARG00000038312	rcl1	100	81.471	Danio_rerio
ENSXMAG00000022366	RCL1	72	79.699	ENSDNOG00000019911	RCL1	100	81.481	Dasypus_novemcinctus
ENSXMAG00000022366	RCL1	99	80.000	ENSDORG00000015645	Rcl1	99	80.000	Dipodomys_ordii
ENSXMAG00000022366	RCL1	98	54.155	FBgn0020909	Rtc1	97	54.424	Drosophila_melanogaster
ENSXMAG00000022366	RCL1	88	55.183	ENSETEG00000014087	-	100	55.183	Echinops_telfairi
ENSXMAG00000022366	RCL1	100	54.960	ENSEBUG00000016621	-	99	54.960	Eptatretus_burgeri
ENSXMAG00000022366	RCL1	99	79.189	ENSEASG00005010653	RCL1	99	79.189	Equus_asinus_asinus
ENSXMAG00000022366	RCL1	99	79.189	ENSECAG00000015973	RCL1	99	79.189	Equus_caballus
ENSXMAG00000022366	RCL1	99	67.297	ENSEEUG00000009801	RCL1	99	67.297	Erinaceus_europaeus
ENSXMAG00000022366	RCL1	100	81.183	ENSELUG00000007353	rcl1	100	81.183	Esox_lucius
ENSXMAG00000022366	RCL1	99	79.189	ENSFCAG00000014557	RCL1	99	79.189	Felis_catus
ENSXMAG00000022366	RCL1	100	70.430	ENSFALG00000010553	RCL1	98	70.430	Ficedula_albicollis
ENSXMAG00000022366	RCL1	88	78.049	ENSFDAG00000004209	RCL1	100	78.049	Fukomys_damarensis
ENSXMAG00000022366	RCL1	100	95.968	ENSFHEG00000011228	rcl1	100	95.968	Fundulus_heteroclitus
ENSXMAG00000022366	RCL1	100	83.065	ENSGMOG00000004677	rcl1	100	83.065	Gadus_morhua
ENSXMAG00000022366	RCL1	99	74.933	ENSGALG00000015024	RCL1	99	74.933	Gallus_gallus
ENSXMAG00000022366	RCL1	100	98.925	ENSGAFG00000007257	rcl1	100	98.925	Gambusia_affinis
ENSXMAG00000022366	RCL1	100	88.978	ENSGACG00000017474	rcl1	100	88.978	Gasterosteus_aculeatus
ENSXMAG00000022366	RCL1	100	75.936	ENSGAGG00000003689	RCL1	100	75.936	Gopherus_agassizii
ENSXMAG00000022366	RCL1	99	78.649	ENSGGOG00000015041	RCL1	99	78.649	Gorilla_gorilla
ENSXMAG00000022366	RCL1	100	91.667	ENSHBUG00000001393	rcl1	100	91.667	Haplochromis_burtoni
ENSXMAG00000022366	RCL1	99	78.108	ENSHGLG00000016452	RCL1	99	78.108	Heterocephalus_glaber_female
ENSXMAG00000022366	RCL1	99	66.125	ENSHGLG00000005368	-	99	66.125	Heterocephalus_glaber_female
ENSXMAG00000022366	RCL1	99	72.703	ENSHGLG00100008718	-	99	72.703	Heterocephalus_glaber_male
ENSXMAG00000022366	RCL1	99	66.938	ENSHGLG00100018010	-	99	66.938	Heterocephalus_glaber_male
ENSXMAG00000022366	RCL1	100	90.591	ENSHCOG00000020170	rcl1	100	90.591	Hippocampus_comes
ENSXMAG00000022366	RCL1	100	83.602	ENSIPUG00000018054	RCL1	100	83.602	Ictalurus_punctatus
ENSXMAG00000022366	RCL1	99	78.108	ENSSTOG00000000023	RCL1	99	78.108	Ictidomys_tridecemlineatus
ENSXMAG00000022366	RCL1	99	69.459	ENSJJAG00000015632	-	99	69.459	Jaculus_jaculus
ENSXMAG00000022366	RCL1	54	62.871	ENSJJAG00000000764	-	98	62.871	Jaculus_jaculus
ENSXMAG00000022366	RCL1	99	79.730	ENSJJAG00000022803	-	99	79.730	Jaculus_jaculus
ENSXMAG00000022366	RCL1	100	93.548	ENSKMAG00000011946	rcl1	100	93.548	Kryptolebias_marmoratus
ENSXMAG00000022366	RCL1	100	86.559	ENSLBEG00000003957	rcl1	100	86.559	Labrus_bergylta
ENSXMAG00000022366	RCL1	93	75.362	ENSLACG00000004594	RCL1	100	79.503	Latimeria_chalumnae
ENSXMAG00000022366	RCL1	100	80.645	ENSLOCG00000010148	rcl1	98	80.645	Lepisosteus_oculatus
ENSXMAG00000022366	RCL1	99	77.838	ENSLAFG00000017495	RCL1	99	77.838	Loxodonta_africana
ENSXMAG00000022366	RCL1	99	78.919	ENSMFAG00000037906	RCL1	99	78.919	Macaca_fascicularis
ENSXMAG00000022366	RCL1	99	78.919	ENSMNEG00000012288	RCL1	99	78.919	Macaca_nemestrina
ENSXMAG00000022366	RCL1	99	78.919	ENSMLEG00000043088	RCL1	99	78.919	Mandrillus_leucophaeus
ENSXMAG00000022366	RCL1	100	92.204	ENSMAMG00000008311	rcl1	100	92.204	Mastacembelus_armatus
ENSXMAG00000022366	RCL1	100	91.398	ENSMZEG00005017292	rcl1	100	91.398	Maylandia_zebra
ENSXMAG00000022366	RCL1	58	74.545	ENSMGAG00000002245	RCL1	100	74.545	Meleagris_gallopavo
ENSXMAG00000022366	RCL1	58	81.481	ENSMAUG00000008922	Rcl1	100	81.481	Mesocricetus_auratus
ENSXMAG00000022366	RCL1	99	79.675	ENSMICG00000015562	RCL1	99	79.675	Microcebus_murinus
ENSXMAG00000022366	RCL1	99	79.189	ENSMOCG00000012145	Rcl1	99	79.189	Microtus_ochrogaster
ENSXMAG00000022366	RCL1	100	87.668	ENSMMOG00000021264	rcl1	100	87.668	Mola_mola
ENSXMAG00000022366	RCL1	95	77.841	ENSMODG00000015377	RCL1	93	77.841	Monodelphis_domestica
ENSXMAG00000022366	RCL1	100	91.129	ENSMALG00000018618	rcl1	100	91.129	Monopterus_albus
ENSXMAG00000022366	RCL1	99	79.189	MGP_CAROLIEiJ_G0022853	Rcl1	99	79.189	Mus_caroli
ENSXMAG00000022366	RCL1	99	78.649	ENSMUSG00000024785	Rcl1	99	78.649	Mus_musculus
ENSXMAG00000022366	RCL1	99	79.459	MGP_PahariEiJ_G0014346	Rcl1	100	80.117	Mus_pahari
ENSXMAG00000022366	RCL1	99	78.649	MGP_SPRETEiJ_G0023771	Rcl1	100	79.532	Mus_spretus
ENSXMAG00000022366	RCL1	99	79.459	ENSMPUG00000004998	RCL1	99	79.459	Mustela_putorius_furo
ENSXMAG00000022366	RCL1	99	77.838	ENSMLUG00000009654	RCL1	99	77.838	Myotis_lucifugus
ENSXMAG00000022366	RCL1	99	79.189	ENSNGAG00000015327	Rcl1	99	79.189	Nannospalax_galili
ENSXMAG00000022366	RCL1	91	89.614	ENSNBRG00000019854	rcl1	99	84.573	Neolamprologus_brichardi
ENSXMAG00000022366	RCL1	99	76.757	ENSNLEG00000008891	RCL1	99	76.757	Nomascus_leucogenys
ENSXMAG00000022366	RCL1	99	71.892	ENSMEUG00000007653	RCL1	99	71.892	Notamacropus_eugenii
ENSXMAG00000022366	RCL1	99	77.297	ENSOPRG00000010965	RCL1	99	77.297	Ochotona_princeps
ENSXMAG00000022366	RCL1	88	66.261	ENSODEG00000004151	RCL1	96	66.261	Octodon_degus
ENSXMAG00000022366	RCL1	100	92.742	ENSONIG00000003871	rcl1	100	92.742	Oreochromis_niloticus
ENSXMAG00000022366	RCL1	66	77.510	ENSOANG00000013193	-	98	77.510	Ornithorhynchus_anatinus
ENSXMAG00000022366	RCL1	99	78.649	ENSOCUG00000008161	RCL1	99	78.649	Oryctolagus_cuniculus
ENSXMAG00000022366	RCL1	100	86.828	ENSORLG00000010443	rcl1	100	86.828	Oryzias_latipes
ENSXMAG00000022366	RCL1	100	87.097	ENSORLG00020012211	rcl1	100	87.097	Oryzias_latipes_hni
ENSXMAG00000022366	RCL1	100	86.559	ENSORLG00015001122	rcl1	100	86.559	Oryzias_latipes_hsok
ENSXMAG00000022366	RCL1	100	89.516	ENSOMEG00000022976	rcl1	88	89.516	Oryzias_melastigma
ENSXMAG00000022366	RCL1	99	78.649	ENSOGAG00000007480	RCL1	99	78.649	Otolemur_garnettii
ENSXMAG00000022366	RCL1	99	78.919	ENSOARG00000013463	RCL1	99	78.919	Ovis_aries
ENSXMAG00000022366	RCL1	99	78.919	ENSPPAG00000037958	RCL1	99	78.919	Pan_paniscus
ENSXMAG00000022366	RCL1	99	78.378	ENSPPRG00000022645	RCL1	99	78.378	Panthera_pardus
ENSXMAG00000022366	RCL1	88	79.511	ENSPTIG00000019031	RCL1	100	80.556	Panthera_tigris_altaica
ENSXMAG00000022366	RCL1	99	78.649	ENSPTRG00000020743	RCL1	97	80.769	Pan_troglodytes
ENSXMAG00000022366	RCL1	99	78.919	ENSPANG00000025151	RCL1	99	78.919	Papio_anubis
ENSXMAG00000022366	RCL1	100	81.183	ENSPKIG00000021022	rcl1	100	81.183	Paramormyrops_kingsleyae
ENSXMAG00000022366	RCL1	88	77.508	ENSPSIG00000012302	RCL1	100	77.508	Pelodiscus_sinensis
ENSXMAG00000022366	RCL1	100	90.591	ENSPMGG00000024007	rcl1	100	90.591	Periophthalmus_magnuspinnatus
ENSXMAG00000022366	RCL1	99	79.459	ENSPEMG00000023275	Rcl1	99	79.459	Peromyscus_maniculatus_bairdii
ENSXMAG00000022366	RCL1	98	30.728	ENSPMAG00000009110	rtca	97	30.728	Petromyzon_marinus
ENSXMAG00000022366	RCL1	99	78.108	ENSPCIG00000000188	RCL1	99	78.108	Phascolarctos_cinereus
ENSXMAG00000022366	RCL1	100	99.194	ENSPFOG00000019682	rcl1	99	99.194	Poecilia_formosa
ENSXMAG00000022366	RCL1	100	99.462	ENSPLAG00000022354	rcl1	100	99.462	Poecilia_latipinna
ENSXMAG00000022366	RCL1	100	99.194	ENSPMEG00000008131	rcl1	100	99.194	Poecilia_mexicana
ENSXMAG00000022366	RCL1	100	99.194	ENSPREG00000008032	rcl1	100	99.194	Poecilia_reticulata
ENSXMAG00000022366	RCL1	99	79.459	ENSPPYG00000019244	RCL1	99	79.459	Pongo_abelii
ENSXMAG00000022366	RCL1	99	72.973	ENSPCAG00000001440	RCL1	99	72.973	Procavia_capensis
ENSXMAG00000022366	RCL1	99	79.730	ENSPCOG00000009611	RCL1	99	79.730	Propithecus_coquereli
ENSXMAG00000022366	RCL1	99	78.649	ENSPVAG00000015752	RCL1	99	78.649	Pteropus_vampyrus
ENSXMAG00000022366	RCL1	100	91.667	ENSPNYG00000012910	rcl1	100	91.667	Pundamilia_nyererei
ENSXMAG00000022366	RCL1	99	83.424	ENSPNAG00000028307	rcl1	91	83.424	Pygocentrus_nattereri
ENSXMAG00000022366	RCL1	99	78.378	ENSRNOG00000015491	Rcl1	99	78.378	Rattus_norvegicus
ENSXMAG00000022366	RCL1	99	78.649	ENSRBIG00000035818	RCL1	99	78.649	Rhinopithecus_bieti
ENSXMAG00000022366	RCL1	99	78.919	ENSRROG00000029781	RCL1	99	78.919	Rhinopithecus_roxellana
ENSXMAG00000022366	RCL1	98	38.315	YOL010W	-	97	38.315	Saccharomyces_cerevisiae
ENSXMAG00000022366	RCL1	99	79.189	ENSSBOG00000026369	RCL1	99	79.189	Saimiri_boliviensis_boliviensis
ENSXMAG00000022366	RCL1	89	78.852	ENSSHAG00000014086	RCL1	100	78.852	Sarcophilus_harrisii
ENSXMAG00000022366	RCL1	100	81.183	ENSSFOG00015023020	rcl1	100	81.183	Scleropages_formosus
ENSXMAG00000022366	RCL1	100	91.398	ENSSMAG00000019751	rcl1	86	91.398	Scophthalmus_maximus
ENSXMAG00000022366	RCL1	100	91.935	ENSSDUG00000006349	rcl1	100	91.935	Seriola_dumerili
ENSXMAG00000022366	RCL1	100	91.129	ENSSLDG00000022076	rcl1	100	91.129	Seriola_lalandi_dorsalis
ENSXMAG00000022366	RCL1	99	79.189	ENSSARG00000009260	RCL1	99	79.189	Sorex_araneus
ENSXMAG00000022366	RCL1	99	76.757	ENSSPUG00000016330	RCL1	99	76.757	Sphenodon_punctatus
ENSXMAG00000022366	RCL1	100	93.817	ENSSPAG00000018038	rcl1	100	93.817	Stegastes_partitus
ENSXMAG00000022366	RCL1	99	79.189	ENSSSCG00000005217	RCL1	82	79.189	Sus_scrofa
ENSXMAG00000022366	RCL1	99	74.462	ENSTGUG00000005138	RCL1	99	74.462	Taeniopygia_guttata
ENSXMAG00000022366	RCL1	100	88.978	ENSTRUG00000010493	rcl1	100	88.978	Takifugu_rubripes
ENSXMAG00000022366	RCL1	100	85.215	ENSTNIG00000013214	rcl1	99	85.215	Tetraodon_nigroviridis
ENSXMAG00000022366	RCL1	99	74.595	ENSTBEG00000016339	RCL1	99	74.595	Tupaia_belangeri
ENSXMAG00000022366	RCL1	99	78.649	ENSTTRG00000016525	RCL1	99	78.649	Tursiops_truncatus
ENSXMAG00000022366	RCL1	99	80.270	ENSUAMG00000005598	RCL1	99	81.875	Ursus_americanus
ENSXMAG00000022366	RCL1	88	80.488	ENSUMAG00000017890	RCL1	97	80.488	Ursus_maritimus
ENSXMAG00000022366	RCL1	88	79.878	ENSVPAG00000009188	RCL1	100	79.878	Vicugna_pacos
ENSXMAG00000022366	RCL1	88	81.459	ENSVVUG00000007304	RCL1	89	81.459	Vulpes_vulpes
ENSXMAG00000022366	RCL1	100	72.267	ENSXETG00000000592	rcl1	100	72.267	Xenopus_tropicalis
ENSXMAG00000022366	RCL1	100	100.000	ENSXCOG00000004922	rcl1	100	100.000	Xiphophorus_couchianus