EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000022554 (Gene tree)
Gene ID: 102224816
Gene Symbol: rnaseh2b
Alias: zgc:56602
Full Name: ribonuclease H2 subunit B
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 9921 bases
Position: chr7:11547189-11557109
Accession: 102224816
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000025322	RNase_H2-Ydr279	PF09468.10	9.2e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000031073	-	5088	XM_023337493	ENSXMAP00000025322	306 (aa)	XP_023193261	UPI0003B5EE84

Gene Model

Click here to download ENSXMAG00000022554's gene model file

Pathways

Pathway ID	Pathway Name	Source
xma03030	DNA replication	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000022554's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000022554	rnaseh2b	88	52.708	ENSG00000136104	RNASEH2B	87	64.198	Homo_sapiens
ENSXMAG00000022554	rnaseh2b	100	84.967	ENSAPOG00000010496	rnaseh2b	100	84.967	Acanthochromis_polyacanthus
ENSXMAG00000022554	rnaseh2b	87	51.661	ENSAMEG00000012040	RNASEH2B	92	51.661	Ailuropoda_melanoleuca
ENSXMAG00000022554	rnaseh2b	100	71.569	ENSACIG00000021991	rnaseh2b	100	74.757	Amphilophus_citrinellus
ENSXMAG00000022554	rnaseh2b	100	85.294	ENSAOCG00000013398	rnaseh2b	100	85.294	Amphiprion_ocellaris
ENSXMAG00000022554	rnaseh2b	100	84.967	ENSAPEG00000006033	rnaseh2b	100	84.967	Amphiprion_percula
ENSXMAG00000022554	rnaseh2b	100	83.333	ENSATEG00000008370	rnaseh2b	100	83.333	Anabas_testudineus
ENSXMAG00000022554	rnaseh2b	83	61.868	ENSAPLG00000008955	RNASEH2B	99	62.132	Anas_platyrhynchos
ENSXMAG00000022554	rnaseh2b	90	54.839	ENSACAG00000011679	RNASEH2B	94	54.839	Anolis_carolinensis
ENSXMAG00000022554	rnaseh2b	87	53.358	ENSANAG00000020662	RNASEH2B	86	53.358	Aotus_nancymaae
ENSXMAG00000022554	rnaseh2b	100	80.719	ENSACLG00000000467	rnaseh2b	100	80.719	Astatotilapia_calliptera
ENSXMAG00000022554	rnaseh2b	99	69.608	ENSAMXG00000014351	rnaseh2b	99	69.608	Astyanax_mexicanus
ENSXMAG00000022554	rnaseh2b	87	52.045	ENSBTAG00000020149	RNASEH2B	87	52.045	Bos_taurus
ENSXMAG00000022554	rnaseh2b	69	48.585	ENSCJAG00000003822	-	79	48.585	Callithrix_jacchus
ENSXMAG00000022554	rnaseh2b	87	53.383	ENSCJAG00000008585	-	88	53.383	Callithrix_jacchus
ENSXMAG00000022554	rnaseh2b	87	51.493	ENSCAFG00000004295	RNASEH2B	88	51.119	Canis_familiaris
ENSXMAG00000022554	rnaseh2b	87	51.493	ENSCAFG00020000250	RNASEH2B	88	51.493	Canis_lupus_dingo
ENSXMAG00000022554	rnaseh2b	75	47.414	ENSCHIG00000012982	-	82	47.414	Capra_hircus
ENSXMAG00000022554	rnaseh2b	87	52.256	ENSCHIG00000018220	RNASEH2B	87	52.256	Capra_hircus
ENSXMAG00000022554	rnaseh2b	87	52.985	ENSTSYG00000009176	-	87	52.985	Carlito_syrichta
ENSXMAG00000022554	rnaseh2b	87	46.067	ENSTSYG00000031177	-	87	46.067	Carlito_syrichta
ENSXMAG00000022554	rnaseh2b	87	45.522	ENSCAPG00000009978	RNASEH2B	91	45.522	Cavia_aperea
ENSXMAG00000022554	rnaseh2b	87	50.186	ENSCPOG00000032527	RNASEH2B	86	50.186	Cavia_porcellus
ENSXMAG00000022554	rnaseh2b	87	53.383	ENSCCAG00000026979	RNASEH2B	88	53.383	Cebus_capucinus
ENSXMAG00000022554	rnaseh2b	85	53.640	ENSCATG00000031336	RNASEH2B	74	53.640	Cercocebus_atys
ENSXMAG00000022554	rnaseh2b	87	52.612	ENSCLAG00000003517	RNASEH2B	74	52.612	Chinchilla_lanigera
ENSXMAG00000022554	rnaseh2b	86	52.632	ENSCSAG00000017701	RNASEH2B	81	52.632	Chlorocebus_sabaeus
ENSXMAG00000022554	rnaseh2b	88	43.796	ENSCHOG00000013688	RNASEH2B	89	45.455	Choloepus_hoffmanni
ENSXMAG00000022554	rnaseh2b	99	55.844	ENSCPBG00000008684	RNASEH2B	95	55.844	Chrysemys_picta_bellii
ENSXMAG00000022554	rnaseh2b	87	34.545	ENSCING00000016454	-	89	34.545	Ciona_intestinalis
ENSXMAG00000022554	rnaseh2b	87	53.137	ENSCANG00000041511	-	87	53.137	Colobus_angolensis_palliatus
ENSXMAG00000022554	rnaseh2b	87	53.358	ENSCGRG00001000611	Rnaseh2b	87	53.731	Cricetulus_griseus_chok1gshd
ENSXMAG00000022554	rnaseh2b	87	53.358	ENSCGRG00000006077	Rnaseh2b	87	53.731	Cricetulus_griseus_crigri
ENSXMAG00000022554	rnaseh2b	100	82.353	ENSCSEG00000004910	rnaseh2b	100	82.353	Cynoglossus_semilaevis
ENSXMAG00000022554	rnaseh2b	100	85.948	ENSCVAG00000005212	rnaseh2b	100	85.948	Cyprinodon_variegatus
ENSXMAG00000022554	rnaseh2b	99	68.301	ENSDARG00000005128	rnaseh2b	99	68.301	Danio_rerio
ENSXMAG00000022554	rnaseh2b	87	46.992	ENSDNOG00000034290	-	86	46.992	Dasypus_novemcinctus
ENSXMAG00000022554	rnaseh2b	87	50.186	ENSDNOG00000049666	-	87	50.186	Dasypus_novemcinctus
ENSXMAG00000022554	rnaseh2b	87	52.985	ENSDORG00000010708	Rnaseh2b	86	52.985	Dipodomys_ordii
ENSXMAG00000022554	rnaseh2b	83	37.500	ENSEBUG00000005965	rnaseh2b	97	37.500	Eptatretus_burgeri
ENSXMAG00000022554	rnaseh2b	87	53.731	ENSEASG00005017323	RNASEH2B	86	53.731	Equus_asinus_asinus
ENSXMAG00000022554	rnaseh2b	87	54.104	ENSECAG00000014262	RNASEH2B	86	54.104	Equus_caballus
ENSXMAG00000022554	rnaseh2b	100	74.593	ENSELUG00000019560	rnaseh2b	100	74.593	Esox_lucius
ENSXMAG00000022554	rnaseh2b	85	50.958	ENSFCAG00000014257	RNASEH2B	82	50.958	Felis_catus
ENSXMAG00000022554	rnaseh2b	90	61.733	ENSFALG00000008435	RNASEH2B	94	61.733	Ficedula_albicollis
ENSXMAG00000022554	rnaseh2b	87	51.119	ENSFDAG00000009920	RNASEH2B	93	51.119	Fukomys_damarensis
ENSXMAG00000022554	rnaseh2b	100	89.542	ENSFHEG00000012160	rnaseh2b	100	89.542	Fundulus_heteroclitus
ENSXMAG00000022554	rnaseh2b	100	66.667	ENSGMOG00000016830	rnaseh2b	100	66.667	Gadus_morhua
ENSXMAG00000022554	rnaseh2b	95	58.844	ENSGALG00000017015	RNASEH2B	100	59.223	Gallus_gallus
ENSXMAG00000022554	rnaseh2b	100	96.732	ENSGAFG00000021222	rnaseh2b	100	96.732	Gambusia_affinis
ENSXMAG00000022554	rnaseh2b	100	77.885	ENSGACG00000002821	rnaseh2b	100	77.885	Gasterosteus_aculeatus
ENSXMAG00000022554	rnaseh2b	91	58.781	ENSGAGG00000014722	RNASEH2B	99	58.781	Gopherus_agassizii
ENSXMAG00000022554	rnaseh2b	87	52.768	ENSGGOG00000001044	RNASEH2B	87	52.768	Gorilla_gorilla
ENSXMAG00000022554	rnaseh2b	100	81.373	ENSHBUG00000006049	rnaseh2b	100	81.373	Haplochromis_burtoni
ENSXMAG00000022554	rnaseh2b	87	51.119	ENSHGLG00100015953	RNASEH2B	91	51.119	Heterocephalus_glaber_male
ENSXMAG00000022554	rnaseh2b	100	73.701	ENSHCOG00000003318	rnaseh2b	100	73.701	Hippocampus_comes
ENSXMAG00000022554	rnaseh2b	100	70.684	ENSIPUG00000023815	rnaseh2b	100	70.684	Ictalurus_punctatus
ENSXMAG00000022554	rnaseh2b	87	52.809	ENSSTOG00000015126	RNASEH2B	91	52.809	Ictidomys_tridecemlineatus
ENSXMAG00000022554	rnaseh2b	87	53.358	ENSJJAG00000013335	Rnaseh2b	90	53.358	Jaculus_jaculus
ENSXMAG00000022554	rnaseh2b	100	86.275	ENSKMAG00000002198	rnaseh2b	100	86.275	Kryptolebias_marmoratus
ENSXMAG00000022554	rnaseh2b	100	82.026	ENSLBEG00000019331	rnaseh2b	100	82.026	Labrus_bergylta
ENSXMAG00000022554	rnaseh2b	68	59.906	ENSLACG00000010782	RNASEH2B	92	60.088	Latimeria_chalumnae
ENSXMAG00000022554	rnaseh2b	100	67.101	ENSLOCG00000009296	rnaseh2b	100	67.101	Lepisosteus_oculatus
ENSXMAG00000022554	rnaseh2b	87	53.160	ENSLAFG00000030158	RNASEH2B	87	53.160	Loxodonta_africana
ENSXMAG00000022554	rnaseh2b	87	53.358	ENSMFAG00000038464	-	86	53.358	Macaca_fascicularis
ENSXMAG00000022554	rnaseh2b	87	48.881	ENSMMUG00000021746	RNASEH2B	85	48.881	Macaca_mulatta
ENSXMAG00000022554	rnaseh2b	87	53.358	ENSMNEG00000030580	RNASEH2B	86	53.358	Macaca_nemestrina
ENSXMAG00000022554	rnaseh2b	87	52.768	ENSMLEG00000043911	-	87	52.768	Mandrillus_leucophaeus
ENSXMAG00000022554	rnaseh2b	100	82.680	ENSMAMG00000017109	rnaseh2b	100	82.680	Mastacembelus_armatus
ENSXMAG00000022554	rnaseh2b	100	76.144	ENSMZEG00005021926	rnaseh2b	100	77.124	Maylandia_zebra
ENSXMAG00000022554	rnaseh2b	85	61.977	ENSMGAG00000015025	RNASEH2B	97	62.230	Meleagris_gallopavo
ENSXMAG00000022554	rnaseh2b	87	52.985	ENSMAUG00000016520	Rnaseh2b	87	53.358	Mesocricetus_auratus
ENSXMAG00000022554	rnaseh2b	87	52.985	ENSMICG00000000528	RNASEH2B	87	52.985	Microcebus_murinus
ENSXMAG00000022554	rnaseh2b	99	79.672	ENSMMOG00000019799	rnaseh2b	100	83.217	Mola_mola
ENSXMAG00000022554	rnaseh2b	98	54.455	ENSMODG00000010775	RNASEH2B	99	54.455	Monodelphis_domestica
ENSXMAG00000022554	rnaseh2b	99	82.951	ENSMALG00000004463	rnaseh2b	100	82.951	Monopterus_albus
ENSXMAG00000022554	rnaseh2b	72	54.505	MGP_CAROLIEiJ_G0019389	Rnaseh2b	81	55.856	Mus_caroli
ENSXMAG00000022554	rnaseh2b	87	54.851	ENSMUSG00000021932	Rnaseh2b	87	54.851	Mus_musculus
ENSXMAG00000022554	rnaseh2b	89	39.617	MGP_PahariEiJ_G0030407	-	90	39.617	Mus_pahari
ENSXMAG00000022554	rnaseh2b	68	48.325	ENSMPUG00000018010	RNASEH2B	87	48.325	Mustela_putorius_furo
ENSXMAG00000022554	rnaseh2b	87	55.224	ENSMLUG00000004065	-	86	55.224	Myotis_lucifugus
ENSXMAG00000022554	rnaseh2b	100	80.719	ENSNBRG00000003253	rnaseh2b	100	80.719	Neolamprologus_brichardi
ENSXMAG00000022554	rnaseh2b	87	52.768	ENSNLEG00000003804	RNASEH2B	87	52.768	Nomascus_leucogenys
ENSXMAG00000022554	rnaseh2b	91	57.447	ENSMEUG00000003665	RNASEH2B	97	57.447	Notamacropus_eugenii
ENSXMAG00000022554	rnaseh2b	53	51.852	ENSOPRG00000003695	-	51	53.704	Ochotona_princeps
ENSXMAG00000022554	rnaseh2b	76	46.983	ENSODEG00000005412	-	86	49.048	Octodon_degus
ENSXMAG00000022554	rnaseh2b	87	52.612	ENSODEG00000006793	-	87	52.612	Octodon_degus
ENSXMAG00000022554	rnaseh2b	100	80.719	ENSONIG00000006657	rnaseh2b	100	80.719	Oreochromis_niloticus
ENSXMAG00000022554	rnaseh2b	89	56.989	ENSOANG00000015537	RNASEH2B	96	56.989	Ornithorhynchus_anatinus
ENSXMAG00000022554	rnaseh2b	88	50.185	ENSOCUG00000008904	RNASEH2B	85	50.923	Oryctolagus_cuniculus
ENSXMAG00000022554	rnaseh2b	99	77.815	ENSORLG00000011850	rnaseh2b	100	77.815	Oryzias_latipes
ENSXMAG00000022554	rnaseh2b	99	77.815	ENSORLG00020012081	rnaseh2b	100	77.815	Oryzias_latipes_hni
ENSXMAG00000022554	rnaseh2b	99	77.152	ENSORLG00015015468	rnaseh2b	100	77.152	Oryzias_latipes_hsok
ENSXMAG00000022554	rnaseh2b	99	79.470	ENSOMEG00000012441	rnaseh2b	100	79.470	Oryzias_melastigma
ENSXMAG00000022554	rnaseh2b	87	53.875	ENSOGAG00000016486	RNASEH2B	91	53.875	Otolemur_garnettii
ENSXMAG00000022554	rnaseh2b	87	52.256	ENSOARG00000008701	RNASEH2B	90	52.256	Ovis_aries
ENSXMAG00000022554	rnaseh2b	87	53.137	ENSPPAG00000026374	RNASEH2B	93	49.528	Pan_paniscus
ENSXMAG00000022554	rnaseh2b	87	50.368	ENSPPRG00000012450	RNASEH2B	89	50.368	Panthera_pardus
ENSXMAG00000022554	rnaseh2b	87	50.735	ENSPTIG00000013918	RNASEH2B	97	50.735	Panthera_tigris_altaica
ENSXMAG00000022554	rnaseh2b	87	52.768	ENSPTRG00000005886	RNASEH2B	95	54.217	Pan_troglodytes
ENSXMAG00000022554	rnaseh2b	87	52.768	ENSPANG00000022424	-	87	52.768	Papio_anubis
ENSXMAG00000022554	rnaseh2b	100	66.124	ENSPKIG00000013386	rnaseh2b	100	66.124	Paramormyrops_kingsleyae
ENSXMAG00000022554	rnaseh2b	58	52.778	ENSPSIG00000002224	RNASEH2B	84	52.778	Pelodiscus_sinensis
ENSXMAG00000022554	rnaseh2b	64	78.974	ENSPMGG00000010299	rnaseh2b	95	78.974	Periophthalmus_magnuspinnatus
ENSXMAG00000022554	rnaseh2b	87	54.104	ENSPEMG00000019721	Rnaseh2b	87	54.104	Peromyscus_maniculatus_bairdii
ENSXMAG00000022554	rnaseh2b	94	52.759	ENSPCIG00000014535	-	97	52.759	Phascolarctos_cinereus
ENSXMAG00000022554	rnaseh2b	100	93.182	ENSPFOG00000016722	rnaseh2b	100	93.182	Poecilia_formosa
ENSXMAG00000022554	rnaseh2b	100	93.464	ENSPLAG00000011755	rnaseh2b	100	93.464	Poecilia_latipinna
ENSXMAG00000022554	rnaseh2b	100	93.791	ENSPMEG00000002721	rnaseh2b	100	93.791	Poecilia_mexicana
ENSXMAG00000022554	rnaseh2b	100	93.791	ENSPREG00000007737	rnaseh2b	100	93.791	Poecilia_reticulata
ENSXMAG00000022554	rnaseh2b	87	52.768	ENSPPYG00000005378	RNASEH2B	86	52.768	Pongo_abelii
ENSXMAG00000022554	rnaseh2b	87	53.532	ENSPCOG00000026623	RNASEH2B	87	53.532	Propithecus_coquereli
ENSXMAG00000022554	rnaseh2b	76	51.915	ENSPVAG00000000508	RNASEH2B	88	51.915	Pteropus_vampyrus
ENSXMAG00000022554	rnaseh2b	100	81.046	ENSPNYG00000013552	rnaseh2b	100	81.046	Pundamilia_nyererei
ENSXMAG00000022554	rnaseh2b	99	69.281	ENSPNAG00000024825	rnaseh2b	99	69.281	Pygocentrus_nattereri
ENSXMAG00000022554	rnaseh2b	87	54.104	ENSRNOG00000009192	Rnaseh2b	87	54.104	Rattus_norvegicus
ENSXMAG00000022554	rnaseh2b	86	47.529	ENSRBIG00000036017	-	86	47.529	Rhinopithecus_bieti
ENSXMAG00000022554	rnaseh2b	87	52.612	ENSRBIG00000028928	-	86	52.612	Rhinopithecus_bieti
ENSXMAG00000022554	rnaseh2b	70	42.254	ENSRROG00000044915	-	80	42.254	Rhinopithecus_roxellana
ENSXMAG00000022554	rnaseh2b	87	52.612	ENSRROG00000018808	-	87	52.030	Rhinopithecus_roxellana
ENSXMAG00000022554	rnaseh2b	87	54.104	ENSSBOG00000008081	RNASEH2B	96	54.104	Saimiri_boliviensis_boliviensis
ENSXMAG00000022554	rnaseh2b	100	54.516	ENSSHAG00000016190	RNASEH2B	100	55.195	Sarcophilus_harrisii
ENSXMAG00000022554	rnaseh2b	99	68.627	ENSSFOG00015010190	rnaseh2b	100	68.627	Scleropages_formosus
ENSXMAG00000022554	rnaseh2b	100	81.373	ENSSMAG00000001546	rnaseh2b	100	81.373	Scophthalmus_maximus
ENSXMAG00000022554	rnaseh2b	100	83.987	ENSSDUG00000007567	rnaseh2b	100	83.987	Seriola_dumerili
ENSXMAG00000022554	rnaseh2b	100	81.759	ENSSLDG00000012485	rnaseh2b	100	81.759	Seriola_lalandi_dorsalis
ENSXMAG00000022554	rnaseh2b	85	54.198	ENSSPUG00000006745	-	94	54.198	Sphenodon_punctatus
ENSXMAG00000022554	rnaseh2b	100	84.967	ENSSPAG00000020926	rnaseh2b	100	84.967	Stegastes_partitus
ENSXMAG00000022554	rnaseh2b	87	52.256	ENSSSCG00000024385	RNASEH2B	95	53.689	Sus_scrofa
ENSXMAG00000022554	rnaseh2b	88	62.132	ENSTGUG00000012104	RNASEH2B	99	62.132	Taeniopygia_guttata
ENSXMAG00000022554	rnaseh2b	100	80.392	ENSTRUG00000015098	rnaseh2b	100	80.392	Takifugu_rubripes
ENSXMAG00000022554	rnaseh2b	100	78.571	ENSTNIG00000013861	rnaseh2b	100	78.571	Tetraodon_nigroviridis
ENSXMAG00000022554	rnaseh2b	87	46.840	ENSTTRG00000010761	RNASEH2B	87	47.584	Tursiops_truncatus
ENSXMAG00000022554	rnaseh2b	87	52.985	ENSUAMG00000022849	RNASEH2B	96	52.985	Ursus_americanus
ENSXMAG00000022554	rnaseh2b	87	52.239	ENSUMAG00000018556	RNASEH2B	96	52.239	Ursus_maritimus
ENSXMAG00000022554	rnaseh2b	87	53.933	ENSVPAG00000005679	RNASEH2B	92	53.933	Vicugna_pacos
ENSXMAG00000022554	rnaseh2b	87	51.119	ENSVVUG00000024015	RNASEH2B	80	51.866	Vulpes_vulpes
ENSXMAG00000022554	rnaseh2b	99	54.545	ENSXETG00000020720	rnaseh2b	100	54.545	Xenopus_tropicalis
ENSXMAG00000022554	rnaseh2b	100	96.417	ENSXCOG00000018732	rnaseh2b	100	96.417	Xiphophorus_couchianus