EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000022565 (Gene tree)
Gene ID: 102222011
Gene Symbol: gnl3
Alias: id:ibd2914|nstm|nucleostemin|wu:fb38a04|wu:fc55d07|zgc:123093
Full Name: G protein nucleolar 3
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 9027 bases
Position: chr20:23067504-23076530
Accession: 102222011
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000030949	GN3L_Grn1	PF08701.11	4.5e-23	1	1
ENSXMAP00000030949	MMR_HSR1	PF01926.23	2e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000027600	-	6269	XM_005804293	ENSXMAP00000030949	550 (aa)	XP_005804350	M3ZPC3

Gene Model

Click here to download ENSXMAG00000022565's gene model file

Pathways

Pathway ID	Pathway Name	Source
xma03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000022565's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000022565	gnl3	99	45.406	ENSG00000163938	GNL3	100	54.348	Homo_sapiens
ENSXMAG00000022565	gnl3	100	71.275	ENSAPOG00000004048	gnl3	100	71.095	Acanthochromis_polyacanthus
ENSXMAG00000022565	gnl3	99	42.199	ENSAMEG00000008456	GNL3	99	42.199	Ailuropoda_melanoleuca
ENSXMAG00000022565	gnl3	100	68.603	ENSACIG00000000545	gnl3	100	68.603	Amphilophus_citrinellus
ENSXMAG00000022565	gnl3	100	71.095	ENSAOCG00000012879	gnl3	100	70.557	Amphiprion_ocellaris
ENSXMAG00000022565	gnl3	100	71.275	ENSAPEG00000006146	gnl3	100	70.736	Amphiprion_percula
ENSXMAG00000022565	gnl3	100	69.838	ENSATEG00000024242	gnl3	100	70.557	Anabas_testudineus
ENSXMAG00000022565	gnl3	81	48.124	ENSAPLG00000005171	GNL3	96	44.146	Anas_platyrhynchos
ENSXMAG00000022565	gnl3	99	46.333	ENSACAG00000007357	GNL3	99	46.181	Anolis_carolinensis
ENSXMAG00000022565	gnl3	99	44.883	ENSANAG00000033209	GNL3	99	44.803	Aotus_nancymaae
ENSXMAG00000022565	gnl3	100	68.659	ENSACLG00000007381	gnl3	100	68.649	Astatotilapia_calliptera
ENSXMAG00000022565	gnl3	99	52.482	ENSAMXG00000020880	gnl3	99	51.675	Astyanax_mexicanus
ENSXMAG00000022565	gnl3	99	45.310	ENSBTAG00000014549	GNL3	99	44.602	Bos_taurus
ENSXMAG00000022565	gnl3	99	44.624	ENSCJAG00000006864	-	99	44.828	Callithrix_jacchus
ENSXMAG00000022565	gnl3	99	44.624	ENSCJAG00000044256	-	99	44.828	Callithrix_jacchus
ENSXMAG00000022565	gnl3	90	46.693	ENSCAFG00000009004	GNL3	99	43.972	Canis_familiaris
ENSXMAG00000022565	gnl3	90	46.894	ENSCAFG00020002613	GNL3	93	46.800	Canis_lupus_dingo
ENSXMAG00000022565	gnl3	99	46.046	ENSCHIG00000022181	GNL3	99	45.439	Capra_hircus
ENSXMAG00000022565	gnl3	99	43.772	ENSTSYG00000006851	GNL3	99	43.416	Carlito_syrichta
ENSXMAG00000022565	gnl3	99	42.105	ENSCPOG00000000282	GNL3	99	42.105	Cavia_porcellus
ENSXMAG00000022565	gnl3	99	45.487	ENSCCAG00000033281	GNL3	99	45.191	Cebus_capucinus
ENSXMAG00000022565	gnl3	99	45.196	ENSCATG00000040886	GNL3	99	44.561	Cercocebus_atys
ENSXMAG00000022565	gnl3	99	42.857	ENSCLAG00000010109	-	99	42.806	Chinchilla_lanigera
ENSXMAG00000022565	gnl3	99	44.346	ENSCSAG00000013315	GNL3	99	44.248	Chlorocebus_sabaeus
ENSXMAG00000022565	gnl3	99	42.382	ENSCHOG00000002726	GNL3	88	44.990	Choloepus_hoffmanni
ENSXMAG00000022565	gnl3	76	47.166	ENSCPBG00000018330	-	96	47.477	Chrysemys_picta_bellii
ENSXMAG00000022565	gnl3	98	43.369	ENSCANG00000039969	GNL3	99	43.369	Colobus_angolensis_palliatus
ENSXMAG00000022565	gnl3	99	43.393	ENSCGRG00001020950	Gnl3	99	44.444	Cricetulus_griseus_chok1gshd
ENSXMAG00000022565	gnl3	99	43.393	ENSCGRG00000015225	Gnl3	99	44.444	Cricetulus_griseus_crigri
ENSXMAG00000022565	gnl3	99	63.587	ENSCSEG00000005009	gnl3	100	63.587	Cynoglossus_semilaevis
ENSXMAG00000022565	gnl3	100	82.033	ENSCVAG00000010679	gnl3	100	82.033	Cyprinodon_variegatus
ENSXMAG00000022565	gnl3	99	54.352	ENSDARG00000006219	gnl3	99	54.189	Danio_rerio
ENSXMAG00000022565	gnl3	99	44.583	ENSDNOG00000001037	GNL3	99	44.425	Dasypus_novemcinctus
ENSXMAG00000022565	gnl3	99	44.746	ENSDORG00000000674	Gnl3	99	44.283	Dipodomys_ordii
ENSXMAG00000022565	gnl3	99	39.783	ENSETEG00000016534	-	99	39.388	Echinops_telfairi
ENSXMAG00000022565	gnl3	99	43.915	ENSEASG00005014636	GNL3	99	43.915	Equus_asinus_asinus
ENSXMAG00000022565	gnl3	99	43.585	ENSECAG00000014850	GNL3	99	43.585	Equus_caballus
ENSXMAG00000022565	gnl3	99	43.268	ENSEEUG00000004427	GNL3	99	43.447	Erinaceus_europaeus
ENSXMAG00000022565	gnl3	100	63.766	ENSELUG00000008767	gnl3	100	63.345	Esox_lucius
ENSXMAG00000022565	gnl3	99	44.523	ENSFCAG00000015719	GNL3	99	43.728	Felis_catus
ENSXMAG00000022565	gnl3	99	48.592	ENSFALG00000008957	GNL3	99	48.415	Ficedula_albicollis
ENSXMAG00000022565	gnl3	99	43.321	ENSFDAG00000020679	GNL3	99	43.038	Fukomys_damarensis
ENSXMAG00000022565	gnl3	100	80.254	ENSFHEG00000020897	gnl3	100	81.703	Fundulus_heteroclitus
ENSXMAG00000022565	gnl3	99	56.940	ENSGMOG00000001745	gnl3	100	56.338	Gadus_morhua
ENSXMAG00000022565	gnl3	99	44.618	ENSGALG00000001613	GNL3	99	45.139	Gallus_gallus
ENSXMAG00000022565	gnl3	99	76.374	ENSGAFG00000007184	gnl3	99	76.514	Gambusia_affinis
ENSXMAG00000022565	gnl3	99	65.357	ENSGACG00000000309	gnl3	99	66.904	Gasterosteus_aculeatus
ENSXMAG00000022565	gnl3	77	47.545	ENSGAGG00000021579	-	97	47.856	Gopherus_agassizii
ENSXMAG00000022565	gnl3	99	45.230	ENSGGOG00000011444	GNL3	89	48.089	Gorilla_gorilla
ENSXMAG00000022565	gnl3	100	70.991	ENSHBUG00000001340	gnl3	100	71.712	Haplochromis_burtoni
ENSXMAG00000022565	gnl3	99	42.446	ENSHGLG00000018299	GNL3	99	42.446	Heterocephalus_glaber_female
ENSXMAG00000022565	gnl3	99	59.930	ENSHCOG00000009446	gnl3	99	60.971	Hippocampus_comes
ENSXMAG00000022565	gnl3	99	47.826	ENSIPUG00000023677	gnl3	99	48.736	Ictalurus_punctatus
ENSXMAG00000022565	gnl3	99	43.761	ENSSTOG00000000356	GNL3	99	44.484	Ictidomys_tridecemlineatus
ENSXMAG00000022565	gnl3	99	45.091	ENSJJAG00000021993	Gnl3	100	45.902	Jaculus_jaculus
ENSXMAG00000022565	gnl3	100	74.368	ENSKMAG00000005965	gnl3	100	74.368	Kryptolebias_marmoratus
ENSXMAG00000022565	gnl3	100	69.801	ENSLBEG00000011394	gnl3	100	69.565	Labrus_bergylta
ENSXMAG00000022565	gnl3	86	53.165	ENSLACG00000001259	GNL3	99	47.359	Latimeria_chalumnae
ENSXMAG00000022565	gnl3	99	52.827	ENSLOCG00000010542	gnl3	99	51.767	Lepisosteus_oculatus
ENSXMAG00000022565	gnl3	99	41.533	ENSLAFG00000016056	GNL3	99	41.301	Loxodonta_africana
ENSXMAG00000022565	gnl3	99	44.444	ENSMFAG00000000613	GNL3	99	44.386	Macaca_fascicularis
ENSXMAG00000022565	gnl3	98	43.243	ENSMMUG00000012511	GNL3	99	43.190	Macaca_mulatta
ENSXMAG00000022565	gnl3	98	43.423	ENSMNEG00000041979	GNL3	99	43.369	Macaca_nemestrina
ENSXMAG00000022565	gnl3	99	45.196	ENSMLEG00000027696	GNL3	99	44.561	Mandrillus_leucophaeus
ENSXMAG00000022565	gnl3	100	72.072	ENSMAMG00000008904	gnl3	100	72.072	Mastacembelus_armatus
ENSXMAG00000022565	gnl3	100	71.351	ENSMZEG00005014857	gnl3	100	71.532	Maylandia_zebra
ENSXMAG00000022565	gnl3	87	65.145	ENSMZEG00005014957	-	97	64.729	Maylandia_zebra
ENSXMAG00000022565	gnl3	85	41.053	ENSMGAG00000000848	GNL3	81	40.120	Meleagris_gallopavo
ENSXMAG00000022565	gnl3	99	44.964	ENSMAUG00000020178	Gnl3	99	44.964	Mesocricetus_auratus
ENSXMAG00000022565	gnl3	99	42.456	ENSMICG00000016373	GNL3	99	42.403	Microcebus_murinus
ENSXMAG00000022565	gnl3	99	44.265	ENSMOCG00000018437	Gnl3	99	44.304	Microtus_ochrogaster
ENSXMAG00000022565	gnl3	99	66.241	ENSMMOG00000002815	gnl3	99	66.241	Mola_mola
ENSXMAG00000022565	gnl3	88	48.354	ENSMODG00000011257	GNL3	99	44.365	Monodelphis_domestica
ENSXMAG00000022565	gnl3	96	64.717	ENSMALG00000021043	gnl3	93	72.017	Monopterus_albus
ENSXMAG00000022565	gnl3	99	44.404	MGP_CAROLIEiJ_G0019063	Gnl3	99	44.585	Mus_caroli
ENSXMAG00000022565	gnl3	99	44.123	ENSMUSG00000042354	Gnl3	100	57.333	Mus_musculus
ENSXMAG00000022565	gnl3	99	44.484	MGP_PahariEiJ_G0030080	Gnl3	99	44.404	Mus_pahari
ENSXMAG00000022565	gnl3	99	44.765	MGP_SPRETEiJ_G0019948	Gnl3	99	44.765	Mus_spretus
ENSXMAG00000022565	gnl3	99	43.009	ENSMPUG00000016777	GNL3	99	43.672	Mustela_putorius_furo
ENSXMAG00000022565	gnl3	99	44.604	ENSMLUG00000000728	GNL3	99	44.424	Myotis_lucifugus
ENSXMAG00000022565	gnl3	99	42.143	ENSNGAG00000017202	Gnl3	99	42.266	Nannospalax_galili
ENSXMAG00000022565	gnl3	87	66.875	ENSNBRG00000013161	gnl3	100	65.795	Neolamprologus_brichardi
ENSXMAG00000022565	gnl3	99	44.956	ENSNLEG00000007173	GNL3	99	44.523	Nomascus_leucogenys
ENSXMAG00000022565	gnl3	61	43.027	ENSMEUG00000011502	-	87	39.277	Notamacropus_eugenii
ENSXMAG00000022565	gnl3	77	39.723	ENSOPRG00000009356	GNL3	96	38.761	Ochotona_princeps
ENSXMAG00000022565	gnl3	99	43.190	ENSODEG00000009492	GNL3	99	43.190	Octodon_degus
ENSXMAG00000022565	gnl3	100	71.223	ENSONIG00000019335	gnl3	100	71.763	Oreochromis_niloticus
ENSXMAG00000022565	gnl3	99	44.876	ENSOANG00000013437	GNL3	99	43.964	Ornithorhynchus_anatinus
ENSXMAG00000022565	gnl3	99	42.832	ENSOCUG00000009841	GNL3	99	43.034	Oryctolagus_cuniculus
ENSXMAG00000022565	gnl3	100	65.154	ENSORLG00000016030	gnl3	100	65.517	Oryzias_latipes
ENSXMAG00000022565	gnl3	100	64.973	ENSORLG00020014358	gnl3	100	65.336	Oryzias_latipes_hni
ENSXMAG00000022565	gnl3	100	64.973	ENSORLG00015009489	gnl3	100	65.336	Oryzias_latipes_hsok
ENSXMAG00000022565	gnl3	100	65.580	ENSOMEG00000005462	gnl3	100	66.062	Oryzias_melastigma
ENSXMAG00000022565	gnl3	99	44.542	ENSOGAG00000004101	GNL3	99	44.718	Otolemur_garnettii
ENSXMAG00000022565	gnl3	99	45.965	ENSOARG00000002470	GNL3	99	45.246	Ovis_aries
ENSXMAG00000022565	gnl3	99	45.583	ENSPPAG00000019253	GNL3	99	45.567	Pan_paniscus
ENSXMAG00000022565	gnl3	99	43.672	ENSPPRG00000009550	GNL3	99	43.380	Panthera_pardus
ENSXMAG00000022565	gnl3	99	43.494	ENSPTIG00000009356	GNL3	99	44.029	Panthera_tigris_altaica
ENSXMAG00000022565	gnl3	99	45.583	ENSPTRG00000015009	GNL3	99	45.567	Pan_troglodytes
ENSXMAG00000022565	gnl3	99	42.504	ENSPANG00000016579	GNL3	99	42.456	Papio_anubis
ENSXMAG00000022565	gnl3	100	57.679	ENSPKIG00000024295	gnl3	100	57.679	Paramormyrops_kingsleyae
ENSXMAG00000022565	gnl3	98	48.115	ENSPSIG00000011486	GNL3	99	48.294	Pelodiscus_sinensis
ENSXMAG00000022565	gnl3	99	62.226	ENSPMGG00000008210	gnl3	99	63.206	Periophthalmus_magnuspinnatus
ENSXMAG00000022565	gnl3	99	43.571	ENSPEMG00000017577	Gnl3	99	43.238	Peromyscus_maniculatus_bairdii
ENSXMAG00000022565	gnl3	87	48.554	ENSPCIG00000018642	GNL3	86	46.061	Phascolarctos_cinereus
ENSXMAG00000022565	gnl3	100	90.036	ENSPFOG00000017601	gnl3	97	93.617	Poecilia_formosa
ENSXMAG00000022565	gnl3	100	93.273	ENSPLAG00000016968	gnl3	100	93.273	Poecilia_latipinna
ENSXMAG00000022565	gnl3	99	85.138	ENSPMEG00000018775	gnl3	99	84.954	Poecilia_mexicana
ENSXMAG00000022565	gnl3	99	85.321	ENSPREG00000002909	gnl3	99	85.321	Poecilia_reticulata
ENSXMAG00000022565	gnl3	99	44.876	ENSPPYG00000013800	GNL3	99	44.876	Pongo_abelii
ENSXMAG00000022565	gnl3	81	46.889	ENSPCAG00000002006	GNL3	81	46.889	Procavia_capensis
ENSXMAG00000022565	gnl3	99	43.540	ENSPCOG00000026637	GNL3	99	43.915	Propithecus_coquereli
ENSXMAG00000022565	gnl3	99	44.050	ENSPVAG00000012586	GNL3	99	44.190	Pteropus_vampyrus
ENSXMAG00000022565	gnl3	90	62.035	ENSPNYG00000005130	gnl3	98	62.035	Pundamilia_nyererei
ENSXMAG00000022565	gnl3	99	53.158	ENSPNAG00000013096	gnl3	99	53.684	Pygocentrus_nattereri
ENSXMAG00000022565	gnl3	99	44.265	ENSRNOG00000028461	Gnl3	99	44.946	Rattus_norvegicus
ENSXMAG00000022565	gnl3	99	44.092	ENSRBIG00000031778	GNL3	99	44.035	Rhinopithecus_bieti
ENSXMAG00000022565	gnl3	99	44.092	ENSRROG00000030086	GNL3	99	44.035	Rhinopithecus_roxellana
ENSXMAG00000022565	gnl3	99	44.326	ENSSBOG00000019990	GNL3	99	44.128	Saimiri_boliviensis_boliviensis
ENSXMAG00000022565	gnl3	86	48.017	ENSSHAG00000006141	GNL3	99	43.470	Sarcophilus_harrisii
ENSXMAG00000022565	gnl3	100	56.912	ENSSFOG00015021228	gnl3	100	57.092	Scleropages_formosus
ENSXMAG00000022565	gnl3	100	68.297	ENSSMAG00000006662	gnl3	100	67.572	Scophthalmus_maximus
ENSXMAG00000022565	gnl3	100	71.300	ENSSDUG00000000972	gnl3	100	71.119	Seriola_dumerili
ENSXMAG00000022565	gnl3	100	71.661	ENSSLDG00000008692	gnl3	92	70.578	Seriola_lalandi_dorsalis
ENSXMAG00000022565	gnl3	89	44.106	ENSSARG00000002226	GNL3	90	44.106	Sorex_araneus
ENSXMAG00000022565	gnl3	99	47.513	ENSSPUG00000003582	GNL3	99	47.743	Sphenodon_punctatus
ENSXMAG00000022565	gnl3	100	72.662	ENSSPAG00000020180	gnl3	100	72.482	Stegastes_partitus
ENSXMAG00000022565	gnl3	99	44.029	ENSSSCG00000011449	GNL3	99	45.018	Sus_scrofa
ENSXMAG00000022565	gnl3	85	52.017	ENSTGUG00000005774	GNL3	99	47.679	Taeniopygia_guttata
ENSXMAG00000022565	gnl3	100	64.260	ENSTRUG00000005552	gnl3	100	64.260	Takifugu_rubripes
ENSXMAG00000022565	gnl3	100	62.862	ENSTNIG00000007263	gnl3	100	63.406	Tetraodon_nigroviridis
ENSXMAG00000022565	gnl3	97	40.179	ENSTBEG00000017518	GNL3	99	40.614	Tupaia_belangeri
ENSXMAG00000022565	gnl3	64	37.746	ENSTTRG00000008574	-	93	36.446	Tursiops_truncatus
ENSXMAG00000022565	gnl3	99	43.219	ENSUAMG00000012347	GNL3	99	43.321	Ursus_americanus
ENSXMAG00000022565	gnl3	99	42.553	ENSUMAG00000021001	GNL3	99	42.655	Ursus_maritimus
ENSXMAG00000022565	gnl3	99	43.116	ENSVVUG00000024536	-	100	46.429	Vulpes_vulpes
ENSXMAG00000022565	gnl3	83	93.723	ENSXCOG00000018425	gnl3	99	93.723	Xiphophorus_couchianus