EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000022849 (Gene tree)
Gene ID: 102229312
Gene Symbol: -
Alias: -
Full Name: heterogeneous nuclear ribonucleoprotein C-like
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 9460 bases
Position: chr6:24027139-24036598
Accession: 102229312
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000026786	RRM_1	PF00076.22	1.6e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000021654	-	3547	XM_014474976	ENSXMAP00000026786	305 (aa)	XP_014330462	-

Gene Model

Click here to download ENSXMAG00000022849's gene model file

Pathways

Pathway ID	Pathway Name	Source
xma03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000022849's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000022849	-	69	56.338	ENSG00000184672	RALYL	91	76.623	Homo_sapiens
ENSXMAG00000022849	-	82	85.771	ENSAPOG00000006963	hnrnpc	81	81.028	Acanthochromis_polyacanthus
ENSXMAG00000022849	-	83	90.980	ENSACIG00000016568	-	82	92.032	Amphilophus_citrinellus
ENSXMAG00000022849	-	83	80.695	ENSACIG00000000270	-	82	82.407	Amphilophus_citrinellus
ENSXMAG00000022849	-	86	90.943	ENSAOCG00000021616	-	83	91.698	Amphiprion_ocellaris
ENSXMAG00000022849	-	82	86.166	ENSAOCG00000003896	-	81	81.423	Amphiprion_ocellaris
ENSXMAG00000022849	-	86	90.943	ENSAPEG00000019962	-	85	91.321	Amphiprion_percula
ENSXMAG00000022849	-	82	86.166	ENSAPEG00000001489	-	81	81.423	Amphiprion_percula
ENSXMAG00000022849	-	86	90.602	ENSATEG00000018006	-	83	91.353	Anabas_testudineus
ENSXMAG00000022849	-	83	82.101	ENSATEG00000011734	-	84	80.237	Anabas_testudineus
ENSXMAG00000022849	-	88	47.038	ENSAPLG00000015574	RALYL	75	55.204	Anas_platyrhynchos
ENSXMAG00000022849	-	88	48.772	ENSACAG00000028464	RALYL	74	55.656	Anolis_carolinensis
ENSXMAG00000022849	-	69	56.338	ENSANAG00000023383	RALYL	73	56.938	Aotus_nancymaae
ENSXMAG00000022849	-	95	69.767	ENSACLG00000013636	-	95	70.764	Astatotilapia_calliptera
ENSXMAG00000022849	-	86	88.390	ENSACLG00000005707	-	90	89.139	Astatotilapia_calliptera
ENSXMAG00000022849	-	82	79.842	ENSACLG00000000995	-	81	82.648	Astatotilapia_calliptera
ENSXMAG00000022849	-	86	78.030	ENSAMXG00000034915	zgc:55733	86	75.200	Astyanax_mexicanus
ENSXMAG00000022849	-	68	75.714	ENSAMXG00000042946	hnrnpc	99	72.165	Astyanax_mexicanus
ENSXMAG00000022849	-	69	56.338	ENSCJAG00000000402	RALYL	73	56.938	Callithrix_jacchus
ENSXMAG00000022849	-	86	47.203	ENSCPOG00000012314	RALYL	74	55.046	Cavia_porcellus
ENSXMAG00000022849	-	69	56.338	ENSCCAG00000025003	RALYL	75	76.623	Cebus_capucinus
ENSXMAG00000022849	-	69	56.338	ENSCATG00000042145	RALYL	73	56.938	Cercocebus_atys
ENSXMAG00000022849	-	86	47.203	ENSCLAG00000005228	RALYL	74	54.545	Chinchilla_lanigera
ENSXMAG00000022849	-	69	53.333	ENSCHOG00000013228	RALYL	74	51.131	Choloepus_hoffmanni
ENSXMAG00000022849	-	69	56.338	ENSCANG00000039144	RALYL	73	56.938	Colobus_angolensis_palliatus
ENSXMAG00000022849	-	86	47.387	ENSCGRG00001009241	Ralyl	74	53.846	Cricetulus_griseus_chok1gshd
ENSXMAG00000022849	-	82	88.400	ENSCSEG00000021349	-	88	78.092	Cynoglossus_semilaevis
ENSXMAG00000022849	-	72	76.786	ENSCSEG00000019769	-	74	75.000	Cynoglossus_semilaevis
ENSXMAG00000022849	-	86	96.970	ENSCVAG00000016981	-	81	96.970	Cyprinodon_variegatus
ENSXMAG00000022849	-	90	64.894	ENSCVAG00000002797	-	85	65.354	Cyprinodon_variegatus
ENSXMAG00000022849	-	80	80.488	ENSDARG00000053810	hnrnpc	78	76.892	Danio_rerio
ENSXMAG00000022849	-	86	78.327	ENSDARG00000103845	zgc:55733	90	74.297	Danio_rerio
ENSXMAG00000022849	-	88	48.772	ENSDORG00000003721	Ralyl	74	54.751	Dipodomys_ordii
ENSXMAG00000022849	-	53	56.069	ENSETEG00000014028	RALYL	81	59.748	Echinops_telfairi
ENSXMAG00000022849	-	88	41.489	ENSEBUG00000012363	hnrnpc	69	44.130	Eptatretus_burgeri
ENSXMAG00000022849	-	68	48.611	ENSEBUG00000006049	RALYL	73	47.619	Eptatretus_burgeri
ENSXMAG00000022849	-	86	47.735	ENSEEUG00000007202	RALYL	76	54.545	Erinaceus_europaeus
ENSXMAG00000022849	-	92	72.054	ENSELUG00000007714	-	88	75.676	Esox_lucius
ENSXMAG00000022849	-	86	77.574	ENSELUG00000004132	-	91	73.571	Esox_lucius
ENSXMAG00000022849	-	88	47.038	ENSFALG00000008647	RALYL	96	58.294	Ficedula_albicollis
ENSXMAG00000022849	-	89	74.820	ENSFHEG00000003605	-	83	74.803	Fundulus_heteroclitus
ENSXMAG00000022849	-	83	91.418	ENSFHEG00000007278	-	81	91.288	Fundulus_heteroclitus
ENSXMAG00000022849	-	68	58.216	ENSGALG00000036938	RALYL	74	55.204	Gallus_gallus
ENSXMAG00000022849	-	89	74.460	ENSGAFG00000020486	-	80	77.778	Gambusia_affinis
ENSXMAG00000022849	-	91	98.208	ENSGAFG00000020992	-	90	98.208	Gambusia_affinis
ENSXMAG00000022849	-	83	86.770	ENSGACG00000017772	-	96	88.755	Gasterosteus_aculeatus
ENSXMAG00000022849	-	71	73.214	ENSGACG00000018932	-	85	68.075	Gasterosteus_aculeatus
ENSXMAG00000022849	-	69	56.338	ENSGGOG00000000841	RALYL	73	56.938	Gorilla_gorilla
ENSXMAG00000022849	-	86	88.390	ENSHBUG00000010527	-	84	89.139	Haplochromis_burtoni
ENSXMAG00000022849	-	82	80.237	ENSHBUG00000018342	-	82	79.447	Haplochromis_burtoni
ENSXMAG00000022849	-	86	46.853	ENSHGLG00000004866	RALYL	74	54.091	Heterocephalus_glaber_female
ENSXMAG00000022849	-	86	46.853	ENSHGLG00100017480	RALYL	74	54.091	Heterocephalus_glaber_male
ENSXMAG00000022849	-	85	83.456	ENSHCOG00000012333	hnrnpc	91	83.394	Hippocampus_comes
ENSXMAG00000022849	-	86	77.273	ENSIPUG00000008666	zgc:55733	99	73.913	Ictalurus_punctatus
ENSXMAG00000022849	-	84	78.682	ENSIPUG00000011271	hnrnpc	99	76.754	Ictalurus_punctatus
ENSXMAG00000022849	-	86	46.875	ENSSTOG00000012583	RALYL	76	54.299	Ictidomys_tridecemlineatus
ENSXMAG00000022849	-	86	91.698	ENSKMAG00000018265	-	83	92.075	Kryptolebias_marmoratus
ENSXMAG00000022849	-	90	76.071	ENSKMAG00000011170	-	81	79.051	Kryptolebias_marmoratus
ENSXMAG00000022849	-	91	73.038	ENSLBEG00000024418	-	84	72.481	Labrus_bergylta
ENSXMAG00000022849	-	93	73.611	ENSLBEG00000006979	-	85	75.904	Labrus_bergylta
ENSXMAG00000022849	-	86	88.550	ENSLBEG00000006193	-	84	89.015	Labrus_bergylta
ENSXMAG00000022849	-	85	70.149	ENSLOCG00000002560	hnrnpc	88	69.112	Lepisosteus_oculatus
ENSXMAG00000022849	-	69	56.338	ENSMNEG00000033288	RALYL	73	56.938	Macaca_nemestrina
ENSXMAG00000022849	-	69	56.338	ENSMLEG00000038284	RALYL	73	56.938	Mandrillus_leucophaeus
ENSXMAG00000022849	-	83	82.031	ENSMAMG00000012236	-	84	78.571	Mastacembelus_armatus
ENSXMAG00000022849	-	86	89.098	ENSMAMG00000008033	-	90	89.850	Mastacembelus_armatus
ENSXMAG00000022849	-	82	79.842	ENSMZEG00005020460	-	87	77.344	Maylandia_zebra
ENSXMAG00000022849	-	86	88.390	ENSMZEG00005024249	-	84	89.139	Maylandia_zebra
ENSXMAG00000022849	-	86	47.387	ENSMAUG00000015149	Ralyl	74	53.846	Mesocricetus_auratus
ENSXMAG00000022849	-	88	49.270	ENSMICG00000005558	RALYL	78	76.623	Microcebus_murinus
ENSXMAG00000022849	-	86	47.387	ENSMOCG00000017371	Ralyl	74	53.846	Microtus_ochrogaster
ENSXMAG00000022849	-	81	89.600	ENSMMOG00000019520	-	82	91.121	Mola_mola
ENSXMAG00000022849	-	87	79.926	ENSMMOG00000021465	-	88	80.159	Mola_mola
ENSXMAG00000022849	-	83	73.725	ENSMALG00000007520	-	83	71.713	Monopterus_albus
ENSXMAG00000022849	-	86	85.660	ENSMALG00000014623	-	84	86.792	Monopterus_albus
ENSXMAG00000022849	-	86	47.387	ENSMUSG00000039717	Ralyl	91	75.325	Mus_musculus
ENSXMAG00000022849	-	86	48.432	ENSMPUG00000010724	RALYL	74	53.846	Mustela_putorius_furo
ENSXMAG00000022849	-	86	46.875	ENSNGAG00000013375	Ralyl	74	53.846	Nannospalax_galili
ENSXMAG00000022849	-	86	88.390	ENSNBRG00000015676	-	83	89.139	Neolamprologus_brichardi
ENSXMAG00000022849	-	83	80.620	ENSNBRG00000004912	-	92	78.125	Neolamprologus_brichardi
ENSXMAG00000022849	-	69	56.338	ENSNLEG00000002702	RALYL	70	56.938	Nomascus_leucogenys
ENSXMAG00000022849	-	58	50.000	ENSOPRG00000013650	-	98	47.368	Ochotona_princeps
ENSXMAG00000022849	-	86	47.203	ENSODEG00000001012	RALYL	74	54.091	Octodon_degus
ENSXMAG00000022849	-	82	81.028	ENSONIG00000007859	-	90	80.460	Oreochromis_niloticus
ENSXMAG00000022849	-	86	88.015	ENSONIG00000018350	-	84	88.764	Oreochromis_niloticus
ENSXMAG00000022849	-	86	91.544	ENSORLG00000003144	-	82	91.544	Oryzias_latipes
ENSXMAG00000022849	-	82	72.157	ENSORLG00000009999	-	82	70.196	Oryzias_latipes
ENSXMAG00000022849	-	82	71.765	ENSORLG00020018228	hnrnpc	82	69.804	Oryzias_latipes_hni
ENSXMAG00000022849	-	82	72.157	ENSORLG00015019755	-	82	70.196	Oryzias_latipes_hsok
ENSXMAG00000022849	-	86	91.544	ENSORLG00015009460	-	82	91.544	Oryzias_latipes_hsok
ENSXMAG00000022849	-	86	93.585	ENSOMEG00000022665	-	83	93.585	Oryzias_melastigma
ENSXMAG00000022849	-	82	73.725	ENSOMEG00000020488	-	81	71.373	Oryzias_melastigma
ENSXMAG00000022849	-	69	56.338	ENSPPAG00000038705	RALYL	73	56.938	Pan_paniscus
ENSXMAG00000022849	-	86	50.542	ENSPPRG00000018612	RALYL	73	56.872	Panthera_pardus
ENSXMAG00000022849	-	86	50.542	ENSPTIG00000020331	RALYL	73	56.872	Panthera_tigris_altaica
ENSXMAG00000022849	-	69	56.338	ENSPTRG00000020381	RALYL	73	56.938	Pan_troglodytes
ENSXMAG00000022849	-	69	56.338	ENSPANG00000029305	RALYL	73	56.938	Papio_anubis
ENSXMAG00000022849	-	86	77.574	ENSPKIG00000008592	-	89	71.986	Paramormyrops_kingsleyae
ENSXMAG00000022849	-	93	75.170	ENSPKIG00000022837	-	81	81.008	Paramormyrops_kingsleyae
ENSXMAG00000022849	-	69	55.111	ENSPSIG00000011135	RALYL	74	55.204	Pelodiscus_sinensis
ENSXMAG00000022849	-	71	78.341	ENSPMGG00000017774	-	92	65.022	Periophthalmus_magnuspinnatus
ENSXMAG00000022849	-	72	88.235	ENSPMGG00000013144	-	82	84.793	Periophthalmus_magnuspinnatus
ENSXMAG00000022849	-	86	47.387	ENSPEMG00000016447	Ralyl	74	53.846	Peromyscus_maniculatus_bairdii
ENSXMAG00000022849	-	69	53.982	ENSPMAG00000002407	RALYL	96	53.153	Petromyzon_marinus
ENSXMAG00000022849	-	95	97.924	ENSPFOG00000002643	-	90	97.924	Poecilia_formosa
ENSXMAG00000022849	-	89	75.090	ENSPFOG00000001583	-	82	77.559	Poecilia_formosa
ENSXMAG00000022849	-	95	97.924	ENSPLAG00000000061	-	90	97.924	Poecilia_latipinna
ENSXMAG00000022849	-	89	73.551	ENSPLAG00000015305	-	82	75.889	Poecilia_latipinna
ENSXMAG00000022849	-	89	76.619	ENSPMEG00000004802	-	82	77.559	Poecilia_mexicana
ENSXMAG00000022849	-	95	97.232	ENSPMEG00000016524	-	90	97.232	Poecilia_mexicana
ENSXMAG00000022849	-	82	76.772	ENSPREG00000007928	-	82	75.984	Poecilia_reticulata
ENSXMAG00000022849	-	95	97.938	ENSPREG00000001852	-	98	97.938	Poecilia_reticulata
ENSXMAG00000022849	-	88	46.341	ENSPVAG00000010821	RALYL	78	52.155	Pteropus_vampyrus
ENSXMAG00000022849	-	86	88.390	ENSPNYG00000003747	-	90	89.139	Pundamilia_nyererei
ENSXMAG00000022849	-	83	81.008	ENSPNYG00000020293	-	86	79.051	Pundamilia_nyererei
ENSXMAG00000022849	-	80	78.138	ENSPNAG00000015686	hnrnpc	89	76.981	Pygocentrus_nattereri
ENSXMAG00000022849	-	86	72.862	ENSPNAG00000019200	zgc:55733	81	73.725	Pygocentrus_nattereri
ENSXMAG00000022849	-	69	56.338	ENSRROG00000023925	RALYL	78	76.623	Rhinopithecus_roxellana
ENSXMAG00000022849	-	92	75.258	ENSSFOG00015012924	-	80	96.203	Scleropages_formosus
ENSXMAG00000022849	-	86	74.908	ENSSFOG00015012015	-	81	83.568	Scleropages_formosus
ENSXMAG00000022849	-	85	89.695	ENSSMAG00000011147	-	81	91.364	Scophthalmus_maximus
ENSXMAG00000022849	-	80	80.321	ENSSMAG00000013592	-	79	78.715	Scophthalmus_maximus
ENSXMAG00000022849	-	86	86.415	ENSSDUG00000006730	-	84	86.415	Seriola_dumerili
ENSXMAG00000022849	-	89	78.909	ENSSDUG00000001723	-	81	81.028	Seriola_dumerili
ENSXMAG00000022849	-	89	79.273	ENSSLDG00000007454	-	82	81.423	Seriola_lalandi_dorsalis
ENSXMAG00000022849	-	86	86.415	ENSSLDG00000007474	-	92	86.415	Seriola_lalandi_dorsalis
ENSXMAG00000022849	-	89	79.348	ENSSPAG00000023204	-	81	81.818	Stegastes_partitus
ENSXMAG00000022849	-	86	92.424	ENSSPAG00000013996	-	84	93.182	Stegastes_partitus
ENSXMAG00000022849	-	88	47.038	ENSTGUG00000011689	RALYL	79	53.913	Taeniopygia_guttata
ENSXMAG00000022849	-	86	78.409	ENSTRUG00000020158	-	82	75.697	Takifugu_rubripes
ENSXMAG00000022849	-	82	78.656	ENSTNIG00000000334	-	93	76.953	Tetraodon_nigroviridis
ENSXMAG00000022849	-	83	78.378	ENSTNIG00000007427	-	83	78.431	Tetraodon_nigroviridis
ENSXMAG00000022849	-	69	48.246	ENSTBEG00000005551	RALYL	86	49.315	Tupaia_belangeri
ENSXMAG00000022849	-	86	46.454	ENSTTRG00000015762	RALYL	74	51.869	Tursiops_truncatus
ENSXMAG00000022849	-	86	46.014	ENSVPAG00000008501	RALYL	73	52.632	Vicugna_pacos
ENSXMAG00000022849	-	50	94.444	ENSXCOG00000019434	-	68	94.304	Xiphophorus_couchianus
ENSXMAG00000022849	-	90	70.251	ENSXCOG00000006552	-	81	70.472	Xiphophorus_couchianus
ENSXMAG00000022849	-	89	75.899	ENSXMAG00000009333	-	82	75.591	Xiphophorus_maculatus