EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000022875 (Gene tree)
Gene ID: 102218099
Gene Symbol: r3hdm4
Alias: zgc:158644
Full Name: R3H domain containing 4
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 8869 bases
Position: chr9:7161495-7170363
Accession: 102218099
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000028487	R3H	PF01424.22	4.9e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000030560	-	3984	XM_005800854	ENSXMAP00000028487	255 (aa)	XP_005800911	M3ZKE2

Gene Model

Click here to download ENSXMAG00000022875's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000022875's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000022875	r3hdm4	100	53.903	ENSG00000198858	R3HDM4	100	53.903	Homo_sapiens
ENSXMAG00000022875	r3hdm4	92	57.143	ENSAMEG00000003001	R3HDM4	97	57.143	Ailuropoda_melanoleuca
ENSXMAG00000022875	r3hdm4	100	85.156	ENSACIG00000004672	r3hdm4	100	85.156	Amphilophus_citrinellus
ENSXMAG00000022875	r3hdm4	98	81.349	ENSATEG00000015913	r3hdm4	99	81.349	Anabas_testudineus
ENSXMAG00000022875	r3hdm4	92	56.723	ENSANAG00000029748	R3HDM4	98	56.723	Aotus_nancymaae
ENSXMAG00000022875	r3hdm4	93	56.225	ENSBTAG00000046406	R3HDM4	100	53.480	Bos_taurus
ENSXMAG00000022875	r3hdm4	93	56.048	ENSCJAG00000020114	R3HDM4	92	56.048	Callithrix_jacchus
ENSXMAG00000022875	r3hdm4	92	57.143	ENSCAFG00000019665	R3HDM4	87	57.143	Canis_familiaris
ENSXMAG00000022875	r3hdm4	92	57.563	ENSCAFG00020016880	R3HDM4	87	57.563	Canis_lupus_dingo
ENSXMAG00000022875	r3hdm4	100	53.846	ENSCHIG00000020110	R3HDM4	100	53.846	Capra_hircus
ENSXMAG00000022875	r3hdm4	92	56.303	ENSCCAG00000019955	R3HDM4	86	56.303	Cebus_capucinus
ENSXMAG00000022875	r3hdm4	100	53.506	ENSCATG00000037269	R3HDM4	100	54.244	Cercocebus_atys
ENSXMAG00000022875	r3hdm4	92	56.540	ENSCLAG00000007094	R3HDM4	97	56.540	Chinchilla_lanigera
ENSXMAG00000022875	r3hdm4	100	54.647	ENSCSAG00000012574	R3HDM4	100	54.647	Chlorocebus_sabaeus
ENSXMAG00000022875	r3hdm4	100	60.000	ENSCPBG00000009805	R3HDM4	100	60.000	Chrysemys_picta_bellii
ENSXMAG00000022875	r3hdm4	92	56.911	ENSCANG00000040439	R3HDM4	86	56.911	Colobus_angolensis_palliatus
ENSXMAG00000022875	r3hdm4	91	56.118	ENSCGRG00001021650	R3hdm4	89	56.118	Cricetulus_griseus_chok1gshd
ENSXMAG00000022875	r3hdm4	91	56.118	ENSCGRG00000013169	R3hdm4	89	56.118	Cricetulus_griseus_crigri
ENSXMAG00000022875	r3hdm4	100	73.725	ENSCSEG00000018211	r3hdm4	99	73.725	Cynoglossus_semilaevis
ENSXMAG00000022875	r3hdm4	100	89.412	ENSCVAG00000017127	r3hdm4	100	89.412	Cyprinodon_variegatus
ENSXMAG00000022875	r3hdm4	91	56.067	ENSDORG00000006605	R3hdm4	96	56.067	Dipodomys_ordii
ENSXMAG00000022875	r3hdm4	92	56.723	ENSEASG00005021556	R3HDM4	86	56.723	Equus_asinus_asinus
ENSXMAG00000022875	r3hdm4	92	56.723	ENSECAG00000000003	R3HDM4	87	56.723	Equus_caballus
ENSXMAG00000022875	r3hdm4	93	57.430	ENSFCAG00000042437	R3HDM4	92	57.430	Felis_catus
ENSXMAG00000022875	r3hdm4	90	62.069	ENSFALG00000013938	R3HDM4	96	62.069	Ficedula_albicollis
ENSXMAG00000022875	r3hdm4	92	56.303	ENSFDAG00000017040	R3HDM4	97	56.303	Fukomys_damarensis
ENSXMAG00000022875	r3hdm4	100	90.196	ENSFHEG00000017636	r3hdm4	100	90.196	Fundulus_heteroclitus
ENSXMAG00000022875	r3hdm4	95	69.835	ENSGMOG00000001231	r3hdm4	100	69.835	Gadus_morhua
ENSXMAG00000022875	r3hdm4	91	60.669	ENSGALG00000001998	R3HDM4	90	60.669	Gallus_gallus
ENSXMAG00000022875	r3hdm4	100	96.078	ENSGAFG00000004173	r3hdm4	100	96.078	Gambusia_affinis
ENSXMAG00000022875	r3hdm4	100	60.000	ENSGAGG00000019698	R3HDM4	100	60.000	Gopherus_agassizii
ENSXMAG00000022875	r3hdm4	92	56.723	ENSGGOG00000008040	R3HDM4	97	56.723	Gorilla_gorilla
ENSXMAG00000022875	r3hdm4	100	84.766	ENSHBUG00000014810	r3hdm4	100	84.766	Haplochromis_burtoni
ENSXMAG00000022875	r3hdm4	92	55.274	ENSHGLG00000016194	R3HDM4	88	55.274	Heterocephalus_glaber_female
ENSXMAG00000022875	r3hdm4	99	77.255	ENSHCOG00000008422	r3hdm4	99	77.255	Hippocampus_comes
ENSXMAG00000022875	r3hdm4	100	67.829	ENSIPUG00000006716	r3hdm4	100	67.829	Ictalurus_punctatus
ENSXMAG00000022875	r3hdm4	92	55.462	ENSSTOG00000023015	R3HDM4	97	55.462	Ictidomys_tridecemlineatus
ENSXMAG00000022875	r3hdm4	91	55.745	ENSJJAG00000012475	R3hdm4	89	55.745	Jaculus_jaculus
ENSXMAG00000022875	r3hdm4	100	85.547	ENSKMAG00000005853	r3hdm4	100	85.547	Kryptolebias_marmoratus
ENSXMAG00000022875	r3hdm4	100	82.812	ENSLBEG00000000730	r3hdm4	100	82.812	Labrus_bergylta
ENSXMAG00000022875	r3hdm4	100	62.214	ENSLACG00000016445	R3HDM4	100	62.214	Latimeria_chalumnae
ENSXMAG00000022875	r3hdm4	100	70.115	ENSLOCG00000002423	r3hdm4	100	70.498	Lepisosteus_oculatus
ENSXMAG00000022875	r3hdm4	91	56.356	ENSLAFG00000017796	R3HDM4	91	56.356	Loxodonta_africana
ENSXMAG00000022875	r3hdm4	100	54.275	ENSMFAG00000044131	R3HDM4	100	54.275	Macaca_fascicularis
ENSXMAG00000022875	r3hdm4	86	58.482	ENSMMUG00000009682	R3HDM4	90	58.482	Macaca_mulatta
ENSXMAG00000022875	r3hdm4	92	57.143	ENSMNEG00000044115	R3HDM4	96	57.143	Macaca_nemestrina
ENSXMAG00000022875	r3hdm4	93	55.967	ENSMLEG00000035693	R3HDM4	89	56.379	Mandrillus_leucophaeus
ENSXMAG00000022875	r3hdm4	87	80.269	ENSMAMG00000005652	r3hdm4	91	80.269	Mastacembelus_armatus
ENSXMAG00000022875	r3hdm4	89	56.223	ENSMAUG00000010611	R3hdm4	90	56.223	Mesocricetus_auratus
ENSXMAG00000022875	r3hdm4	100	52.768	ENSMICG00000010124	R3HDM4	100	52.768	Microcebus_murinus
ENSXMAG00000022875	r3hdm4	91	55.319	ENSMOCG00000002646	R3hdm4	89	56.356	Microtus_ochrogaster
ENSXMAG00000022875	r3hdm4	100	81.176	ENSMMOG00000008253	r3hdm4	100	81.176	Mola_mola
ENSXMAG00000022875	r3hdm4	89	60.000	ENSMODG00000005698	R3HDM4	99	60.000	Monodelphis_domestica
ENSXMAG00000022875	r3hdm4	100	80.469	ENSMALG00000018856	r3hdm4	100	80.469	Monopterus_albus
ENSXMAG00000022875	r3hdm4	99	52.091	MGP_CAROLIEiJ_G0015551	R3hdm4	99	52.852	Mus_caroli
ENSXMAG00000022875	r3hdm4	99	52.107	ENSMUSG00000035781	R3hdm4	99	52.874	Mus_musculus
ENSXMAG00000022875	r3hdm4	99	52.471	MGP_PahariEiJ_G0030964	R3hdm4	99	53.232	Mus_pahari
ENSXMAG00000022875	r3hdm4	99	52.852	MGP_SPRETEiJ_G0016369	-	84	53.612	Mus_spretus
ENSXMAG00000022875	r3hdm4	93	57.851	ENSMPUG00000009394	R3HDM4	90	57.851	Mustela_putorius_furo
ENSXMAG00000022875	r3hdm4	100	83.984	ENSNBRG00000004438	r3hdm4	100	83.984	Neolamprologus_brichardi
ENSXMAG00000022875	r3hdm4	87	53.478	ENSNLEG00000001022	R3HDM4	99	53.478	Nomascus_leucogenys
ENSXMAG00000022875	r3hdm4	92	58.403	ENSMEUG00000011020	R3HDM4	99	58.403	Notamacropus_eugenii
ENSXMAG00000022875	r3hdm4	92	56.540	ENSODEG00000011745	R3HDM4	88	56.540	Octodon_degus
ENSXMAG00000022875	r3hdm4	100	84.766	ENSONIG00000012675	r3hdm4	92	84.766	Oreochromis_niloticus
ENSXMAG00000022875	r3hdm4	100	81.641	ENSOMEG00000003005	r3hdm4	100	81.641	Oryzias_melastigma
ENSXMAG00000022875	r3hdm4	91	56.780	ENSOGAG00000025656	R3HDM4	89	56.780	Otolemur_garnettii
ENSXMAG00000022875	r3hdm4	92	56.723	ENSOARG00000009945	R3HDM4	97	56.723	Ovis_aries
ENSXMAG00000022875	r3hdm4	92	56.723	ENSPPAG00000042371	R3HDM4	97	56.723	Pan_paniscus
ENSXMAG00000022875	r3hdm4	100	54.275	ENSPANG00000015203	R3HDM4	100	54.275	Papio_anubis
ENSXMAG00000022875	r3hdm4	100	64.504	ENSPKIG00000007421	r3hdm4	100	66.031	Paramormyrops_kingsleyae
ENSXMAG00000022875	r3hdm4	100	73.930	ENSPMGG00000020467	r3hdm4	100	73.930	Periophthalmus_magnuspinnatus
ENSXMAG00000022875	r3hdm4	91	57.447	ENSPEMG00000008365	Tmem259	97	57.447	Peromyscus_maniculatus_bairdii
ENSXMAG00000022875	r3hdm4	100	94.902	ENSPFOG00000003199	r3hdm4	100	94.902	Poecilia_formosa
ENSXMAG00000022875	r3hdm4	100	94.510	ENSPMEG00000014183	r3hdm4	100	94.510	Poecilia_mexicana
ENSXMAG00000022875	r3hdm4	100	95.294	ENSPREG00000010709	r3hdm4	100	95.294	Poecilia_reticulata
ENSXMAG00000022875	r3hdm4	92	56.780	ENSPPYG00000009297	R3HDM4	88	56.780	Pongo_abelii
ENSXMAG00000022875	r3hdm4	58	59.477	ENSPCAG00000010997	R3HDM4	55	59.477	Procavia_capensis
ENSXMAG00000022875	r3hdm4	100	53.137	ENSPCOG00000016785	R3HDM4	100	53.137	Propithecus_coquereli
ENSXMAG00000022875	r3hdm4	100	84.766	ENSPNYG00000017489	r3hdm4	100	84.766	Pundamilia_nyererei
ENSXMAG00000022875	r3hdm4	99	52.075	ENSRNOG00000011489	R3hdm4	99	53.030	Rattus_norvegicus
ENSXMAG00000022875	r3hdm4	92	57.143	ENSRROG00000028842	R3HDM4	88	57.143	Rhinopithecus_roxellana
ENSXMAG00000022875	r3hdm4	92	55.422	ENSSBOG00000019298	R3HDM4	73	56.225	Saimiri_boliviensis_boliviensis
ENSXMAG00000022875	r3hdm4	56	59.589	ENSSHAG00000003036	-	100	59.589	Sarcophilus_harrisii
ENSXMAG00000022875	r3hdm4	97	70.968	ENSSFOG00015020574	r3hdm4	91	70.683	Scleropages_formosus
ENSXMAG00000022875	r3hdm4	100	81.250	ENSSMAG00000021090	r3hdm4	74	81.250	Scophthalmus_maximus
ENSXMAG00000022875	r3hdm4	100	83.594	ENSSDUG00000008488	r3hdm4	100	83.594	Seriola_dumerili
ENSXMAG00000022875	r3hdm4	100	83.203	ENSSLDG00000025328	r3hdm4	100	83.203	Seriola_lalandi_dorsalis
ENSXMAG00000022875	r3hdm4	93	61.066	ENSSPUG00000005434	R3HDM4	93	61.066	Sphenodon_punctatus
ENSXMAG00000022875	r3hdm4	99	79.688	ENSSPAG00000002562	r3hdm4	99	79.688	Stegastes_partitus
ENSXMAG00000022875	r3hdm4	93	57.028	ENSSSCG00000013419	R3HDM4	91	57.028	Sus_scrofa
ENSXMAG00000022875	r3hdm4	77	53.465	ENSTGUG00000000663	R3HDM4	97	53.960	Taeniopygia_guttata
ENSXMAG00000022875	r3hdm4	92	57.627	ENSTTRG00000001470	R3HDM4	97	57.627	Tursiops_truncatus
ENSXMAG00000022875	r3hdm4	93	51.417	ENSUAMG00000005751	R3HDM4	100	58.036	Ursus_americanus
ENSXMAG00000022875	r3hdm4	93	56.225	ENSVVUG00000022685	R3HDM4	91	56.225	Vulpes_vulpes
ENSXMAG00000022875	r3hdm4	97	47.177	ENSXETG00000033624	R3HDM4	96	47.177	Xenopus_tropicalis
ENSXMAG00000022875	r3hdm4	100	99.219	ENSXCOG00000005127	r3hdm4	100	99.219	Xiphophorus_couchianus