EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000023049 (Gene tree)
Gene ID: 102222778
Gene Symbol: imp3
Alias: zgc:56526
Full Name: IMP3%2C U3 small nucleolar ribonucleoprotein
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 9059 bases
Position: chr6:3412979-3422037
Accession: 102222778
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000025494	S4	PF01479.25	4.4e-09	1	1
ENSXMAP00000025494	Ribosomal_S4	PF00163.19	2.8e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000040974	-	5317	XM_005802372	ENSXMAP00000025494	183 (aa)	XP_005802429	M3ZQL9

Gene Model

Click here to download ENSXMAG00000023049's gene model file

Pathways

Pathway ID	Pathway Name	Source
xma03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000023049's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000023049	imp3	100	93.443	ENSAPOG00000014720	imp3	100	93.443	Acanthochromis_polyacanthus
ENSXMAG00000023049	imp3	100	70.109	ENSAMEG00000019247	IMP3	100	70.109	Ailuropoda_melanoleuca
ENSXMAG00000023049	imp3	98	93.855	ENSACIG00000022070	imp3	96	93.855	Amphilophus_citrinellus
ENSXMAG00000023049	imp3	100	92.896	ENSAOCG00000015761	imp3	100	92.896	Amphiprion_ocellaris
ENSXMAG00000023049	imp3	100	92.350	ENSAPEG00000005250	imp3	100	92.350	Amphiprion_percula
ENSXMAG00000023049	imp3	100	95.628	ENSATEG00000020021	imp3	100	95.628	Anabas_testudineus
ENSXMAG00000023049	imp3	100	66.310	ENSACAG00000016259	IMP3	100	66.310	Anolis_carolinensis
ENSXMAG00000023049	imp3	100	68.478	ENSANAG00000016669	-	100	68.478	Aotus_nancymaae
ENSXMAG00000023049	imp3	99	58.242	ENSANAG00000036874	-	99	58.242	Aotus_nancymaae
ENSXMAG00000023049	imp3	100	95.082	ENSACLG00000009929	imp3	100	95.082	Astatotilapia_calliptera
ENSXMAG00000023049	imp3	96	86.286	ENSAMXG00000018715	imp3	99	86.286	Astyanax_mexicanus
ENSXMAG00000023049	imp3	99	52.198	WBGene00016740	C48B6.2	99	52.198	Caenorhabditis_elegans
ENSXMAG00000023049	imp3	100	68.478	ENSCJAG00000044585	IMP3	100	68.478	Callithrix_jacchus
ENSXMAG00000023049	imp3	100	66.848	ENSCAFG00000018039	IMP3	82	66.848	Canis_familiaris
ENSXMAG00000023049	imp3	100	55.978	ENSCAFG00020006737	-	100	56.522	Canis_lupus_dingo
ENSXMAG00000023049	imp3	100	66.848	ENSCAFG00020003760	-	100	66.848	Canis_lupus_dingo
ENSXMAG00000023049	imp3	100	69.565	ENSCHIG00000006295	IMP3	100	69.565	Capra_hircus
ENSXMAG00000023049	imp3	100	69.022	ENSTSYG00000005503	IMP3	100	69.022	Carlito_syrichta
ENSXMAG00000023049	imp3	100	69.565	ENSCPOG00000012016	IMP3	100	69.565	Cavia_porcellus
ENSXMAG00000023049	imp3	100	68.478	ENSCCAG00000002712	-	100	68.478	Cebus_capucinus
ENSXMAG00000023049	imp3	98	60.000	ENSCCAG00000023378	-	99	58.621	Cebus_capucinus
ENSXMAG00000023049	imp3	100	69.022	ENSCATG00000015188	IMP3	100	69.022	Cercocebus_atys
ENSXMAG00000023049	imp3	100	69.022	ENSCSAG00000019732	IMP3	100	69.022	Chlorocebus_sabaeus
ENSXMAG00000023049	imp3	100	69.565	ENSCHOG00000012046	IMP3	100	69.565	Choloepus_hoffmanni
ENSXMAG00000023049	imp3	100	63.784	ENSCPBG00000021662	IMP3	100	63.784	Chrysemys_picta_bellii
ENSXMAG00000023049	imp3	99	65.193	ENSCING00000004233	-	100	65.193	Ciona_intestinalis
ENSXMAG00000023049	imp3	99	66.851	ENSCSAVG00000000698	-	100	66.851	Ciona_savignyi
ENSXMAG00000023049	imp3	100	69.022	ENSCANG00000018342	IMP3	100	69.022	Colobus_angolensis_palliatus
ENSXMAG00000023049	imp3	100	67.935	ENSCGRG00001001326	Imp3	100	67.935	Cricetulus_griseus_chok1gshd
ENSXMAG00000023049	imp3	100	67.935	ENSCGRG00000018907	Imp3	100	67.935	Cricetulus_griseus_crigri
ENSXMAG00000023049	imp3	99	90.110	ENSCSEG00000017200	imp3	99	90.110	Cynoglossus_semilaevis
ENSXMAG00000023049	imp3	100	84.737	ENSCVAG00000019511	imp3	100	84.737	Cyprinodon_variegatus
ENSXMAG00000023049	imp3	100	85.792	ENSDARG00000115266	imp3	100	86.391	Danio_rerio
ENSXMAG00000023049	imp3	100	68.478	ENSDNOG00000015787	IMP3	81	68.478	Dasypus_novemcinctus
ENSXMAG00000023049	imp3	100	67.391	ENSDORG00000029301	Imp3	100	67.391	Dipodomys_ordii
ENSXMAG00000023049	imp3	99	61.326	FBgn0034232	CG4866	100	61.326	Drosophila_melanogaster
ENSXMAG00000023049	imp3	100	70.652	ENSETEG00000004278	IMP3	100	70.652	Echinops_telfairi
ENSXMAG00000023049	imp3	99	72.376	ENSEBUG00000002343	imp3	99	72.376	Eptatretus_burgeri
ENSXMAG00000023049	imp3	100	68.478	ENSEASG00005015693	IMP3	100	68.478	Equus_asinus_asinus
ENSXMAG00000023049	imp3	100	69.022	ENSECAG00000015786	IMP3	100	69.022	Equus_caballus
ENSXMAG00000023049	imp3	100	88.525	ENSELUG00000023264	imp3	100	88.525	Esox_lucius
ENSXMAG00000023049	imp3	100	69.022	ENSFCAG00000040328	IMP3	100	69.022	Felis_catus
ENSXMAG00000023049	imp3	71	54.198	ENSFALG00000014811	IMP3	99	56.489	Ficedula_albicollis
ENSXMAG00000023049	imp3	100	69.565	ENSFDAG00000018422	IMP3	100	69.565	Fukomys_damarensis
ENSXMAG00000023049	imp3	100	94.536	ENSFHEG00000016954	imp3	100	94.536	Fundulus_heteroclitus
ENSXMAG00000023049	imp3	100	88.525	ENSGMOG00000018162	imp3	100	88.525	Gadus_morhua
ENSXMAG00000023049	imp3	100	55.135	ENSGALG00000040238	IMP3	100	56.757	Gallus_gallus
ENSXMAG00000023049	imp3	100	98.361	ENSGAFG00000007425	imp3	100	98.361	Gambusia_affinis
ENSXMAG00000023049	imp3	100	90.164	ENSGACG00000015998	imp3	100	90.164	Gasterosteus_aculeatus
ENSXMAG00000023049	imp3	100	62.703	ENSGAGG00000008163	IMP3	100	62.703	Gopherus_agassizii
ENSXMAG00000023049	imp3	100	69.022	ENSGGOG00000025122	IMP3	100	69.022	Gorilla_gorilla
ENSXMAG00000023049	imp3	100	95.628	ENSHBUG00000018453	imp3	100	95.628	Haplochromis_burtoni
ENSXMAG00000023049	imp3	100	69.022	ENSHGLG00000019824	IMP3	100	69.022	Heterocephalus_glaber_female
ENSXMAG00000023049	imp3	100	69.022	ENSHGLG00100020660	IMP3	100	69.022	Heterocephalus_glaber_male
ENSXMAG00000023049	imp3	100	91.803	ENSHCOG00000020565	imp3	100	91.803	Hippocampus_comes
ENSXMAG00000023049	imp3	100	84.153	ENSIPUG00000013142	imp3	100	84.153	Ictalurus_punctatus
ENSXMAG00000023049	imp3	100	69.565	ENSSTOG00000030143	IMP3	100	69.565	Ictidomys_tridecemlineatus
ENSXMAG00000023049	imp3	100	93.443	ENSKMAG00000001956	imp3	100	93.443	Kryptolebias_marmoratus
ENSXMAG00000023049	imp3	100	92.350	ENSLBEG00000008178	imp3	100	92.350	Labrus_bergylta
ENSXMAG00000023049	imp3	100	81.421	ENSLACG00000022148	imp3	100	81.421	Latimeria_chalumnae
ENSXMAG00000023049	imp3	100	84.153	ENSLOCG00000010237	imp3	100	84.153	Lepisosteus_oculatus
ENSXMAG00000023049	imp3	99	69.231	ENSLAFG00000004425	IMP3	99	69.231	Loxodonta_africana
ENSXMAG00000023049	imp3	100	69.022	ENSMFAG00000008867	IMP3	100	69.022	Macaca_fascicularis
ENSXMAG00000023049	imp3	100	69.022	ENSMMUG00000016103	IMP3	100	69.022	Macaca_mulatta
ENSXMAG00000023049	imp3	100	69.022	ENSMNEG00000026328	IMP3	100	69.022	Macaca_nemestrina
ENSXMAG00000023049	imp3	100	95.628	ENSMAMG00000003215	imp3	100	95.628	Mastacembelus_armatus
ENSXMAG00000023049	imp3	100	95.082	ENSMZEG00005005544	imp3	100	95.082	Maylandia_zebra
ENSXMAG00000023049	imp3	100	68.478	ENSMAUG00000010279	Imp3	100	68.478	Mesocricetus_auratus
ENSXMAG00000023049	imp3	100	69.022	ENSMICG00000044149	IMP3	100	69.022	Microcebus_murinus
ENSXMAG00000023049	imp3	100	69.022	ENSMOCG00000008647	Imp3	100	69.022	Microtus_ochrogaster
ENSXMAG00000023049	imp3	96	93.714	ENSMMOG00000018117	imp3	84	93.714	Mola_mola
ENSXMAG00000023049	imp3	100	68.478	ENSMODG00000025193	IMP3	100	68.478	Monodelphis_domestica
ENSXMAG00000023049	imp3	100	95.082	ENSMALG00000006505	imp3	100	95.082	Monopterus_albus
ENSXMAG00000023049	imp3	100	67.935	MGP_CAROLIEiJ_G0032258	Imp3	100	67.935	Mus_caroli
ENSXMAG00000023049	imp3	100	67.935	ENSMUSG00000032288	Imp3	100	67.935	Mus_musculus
ENSXMAG00000023049	imp3	100	67.935	MGP_PahariEiJ_G0015125	Imp3	100	67.935	Mus_pahari
ENSXMAG00000023049	imp3	100	67.935	MGP_SPRETEiJ_G0033398	Imp3	100	67.935	Mus_spretus
ENSXMAG00000023049	imp3	100	68.478	ENSMPUG00000020147	IMP3	100	68.478	Mustela_putorius_furo
ENSXMAG00000023049	imp3	100	69.022	ENSMLUG00000014032	IMP3	100	69.022	Myotis_lucifugus
ENSXMAG00000023049	imp3	100	67.391	ENSNGAG00000017248	Imp3	100	67.391	Nannospalax_galili
ENSXMAG00000023049	imp3	100	95.082	ENSNBRG00000004060	imp3	100	95.082	Neolamprologus_brichardi
ENSXMAG00000023049	imp3	100	69.022	ENSOPRG00000015906	-	100	69.022	Ochotona_princeps
ENSXMAG00000023049	imp3	100	69.565	ENSODEG00000020194	IMP3	100	69.565	Octodon_degus
ENSXMAG00000023049	imp3	100	93.989	ENSONIG00000010661	imp3	100	93.989	Oreochromis_niloticus
ENSXMAG00000023049	imp3	100	69.022	ENSOCUG00000004690	IMP3	100	69.022	Oryctolagus_cuniculus
ENSXMAG00000023049	imp3	100	92.350	ENSORLG00000004484	imp3	100	92.350	Oryzias_latipes
ENSXMAG00000023049	imp3	100	92.350	ENSORLG00020003771	imp3	100	92.350	Oryzias_latipes_hni
ENSXMAG00000023049	imp3	100	91.803	ENSORLG00015006933	imp3	100	91.803	Oryzias_latipes_hsok
ENSXMAG00000023049	imp3	100	92.350	ENSOMEG00000016160	imp3	100	92.350	Oryzias_melastigma
ENSXMAG00000023049	imp3	100	69.022	ENSOGAG00000004917	IMP3	100	69.022	Otolemur_garnettii
ENSXMAG00000023049	imp3	100	69.022	ENSPPAG00000009241	IMP3	100	69.022	Pan_paniscus
ENSXMAG00000023049	imp3	100	69.022	ENSPPRG00000018701	IMP3	100	69.022	Panthera_pardus
ENSXMAG00000023049	imp3	100	69.022	ENSPTRG00000052235	IMP3	100	69.022	Pan_troglodytes
ENSXMAG00000023049	imp3	100	69.022	ENSPANG00000013668	IMP3	100	69.022	Papio_anubis
ENSXMAG00000023049	imp3	100	86.885	ENSPKIG00000007169	imp3	100	86.885	Paramormyrops_kingsleyae
ENSXMAG00000023049	imp3	100	80.645	ENSPMGG00000009379	imp3	100	80.645	Periophthalmus_magnuspinnatus
ENSXMAG00000023049	imp3	100	67.935	ENSPEMG00000013003	Imp3	100	67.935	Peromyscus_maniculatus_bairdii
ENSXMAG00000023049	imp3	100	98.907	ENSPFOG00000016529	imp3	100	98.907	Poecilia_formosa
ENSXMAG00000023049	imp3	100	99.454	ENSPLAG00000013831	imp3	100	99.454	Poecilia_latipinna
ENSXMAG00000023049	imp3	100	98.361	ENSPMEG00000000797	imp3	100	98.361	Poecilia_mexicana
ENSXMAG00000023049	imp3	100	98.361	ENSPREG00000006885	imp3	100	98.361	Poecilia_reticulata
ENSXMAG00000023049	imp3	100	69.565	ENSPPYG00000006664	IMP3	100	69.565	Pongo_abelii
ENSXMAG00000023049	imp3	99	69.780	ENSPCAG00000006920	IMP3	99	69.780	Procavia_capensis
ENSXMAG00000023049	imp3	100	69.022	ENSPCOG00000012367	IMP3	100	69.022	Propithecus_coquereli
ENSXMAG00000023049	imp3	100	69.565	ENSPVAG00000010036	IMP3	100	69.565	Pteropus_vampyrus
ENSXMAG00000023049	imp3	100	95.082	ENSPNYG00000000324	imp3	100	95.082	Pundamilia_nyererei
ENSXMAG00000023049	imp3	100	89.617	ENSPNAG00000017113	imp3	100	89.617	Pygocentrus_nattereri
ENSXMAG00000023049	imp3	100	67.935	ENSRNOG00000017460	Imp3	100	67.935	Rattus_norvegicus
ENSXMAG00000023049	imp3	100	69.565	ENSRBIG00000024522	IMP3	100	69.565	Rhinopithecus_bieti
ENSXMAG00000023049	imp3	100	69.565	ENSRROG00000024157	IMP3	100	69.565	Rhinopithecus_roxellana
ENSXMAG00000023049	imp3	99	54.945	YHR148W	-	99	54.945	Saccharomyces_cerevisiae
ENSXMAG00000023049	imp3	99	59.890	ENSSBOG00000026404	-	99	59.890	Saimiri_boliviensis_boliviensis
ENSXMAG00000023049	imp3	100	68.478	ENSSBOG00000006542	-	100	68.478	Saimiri_boliviensis_boliviensis
ENSXMAG00000023049	imp3	99	65.934	ENSSHAG00000006200	IMP3	99	65.934	Sarcophilus_harrisii
ENSXMAG00000023049	imp3	100	86.339	ENSSFOG00015012483	imp3	100	86.339	Scleropages_formosus
ENSXMAG00000023049	imp3	100	93.989	ENSSMAG00000007865	imp3	100	93.989	Scophthalmus_maximus
ENSXMAG00000023049	imp3	100	95.628	ENSSDUG00000010594	imp3	100	95.628	Seriola_dumerili
ENSXMAG00000023049	imp3	100	95.628	ENSSLDG00000015587	imp3	100	95.628	Seriola_lalandi_dorsalis
ENSXMAG00000023049	imp3	100	69.565	ENSSARG00000009657	IMP3	100	69.565	Sorex_araneus
ENSXMAG00000023049	imp3	100	92.350	ENSSPAG00000002088	imp3	100	92.350	Stegastes_partitus
ENSXMAG00000023049	imp3	100	55.135	ENSTGUG00000013228	IMP3	100	56.757	Taeniopygia_guttata
ENSXMAG00000023049	imp3	99	92.857	ENSTRUG00000025783	imp3	99	92.857	Takifugu_rubripes
ENSXMAG00000023049	imp3	100	69.565	ENSUAMG00000022724	IMP3	100	69.565	Ursus_americanus
ENSXMAG00000023049	imp3	100	69.565	ENSUMAG00000003736	IMP3	100	69.565	Ursus_maritimus
ENSXMAG00000023049	imp3	100	67.391	ENSVVUG00000019589	IMP3	100	67.391	Vulpes_vulpes
ENSXMAG00000023049	imp3	96	99.429	ENSXCOG00000007392	imp3	96	99.429	Xiphophorus_couchianus