EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000023351 (Gene tree)
Gene ID: 102233424
Gene Symbol: rpusd4
Alias: si:ch211-14i3.3|zgc:92006
Full Name: mitochondrial RNA pseudouridine synthase rpusd4-like
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 8658 bases
Position: chr20:18284758-18293415
Accession: 102233424
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000036068	PseudoU_synth_2	PF00849.22	1.7e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000039500	-	6325	XM_005807321	ENSXMAP00000036068	390 (aa)	XP_005807378	UPI0003B4F044

Gene Model

Click here to download ENSXMAG00000023351's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000023351's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000023351	rpusd4	84	50.000	ENSG00000165526	RPUSD4	90	48.563	Homo_sapiens
ENSXMAG00000023351	rpusd4	100	69.367	ENSAPOG00000011024	rpusd4	98	69.367	Acanthochromis_polyacanthus
ENSXMAG00000023351	rpusd4	84	50.301	ENSAMEG00000000127	-	86	50.301	Ailuropoda_melanoleuca
ENSXMAG00000023351	rpusd4	57	54.902	ENSAMEG00000005953	-	96	54.902	Ailuropoda_melanoleuca
ENSXMAG00000023351	rpusd4	85	73.030	ENSACIG00000003533	rpusd4	95	73.252	Amphilophus_citrinellus
ENSXMAG00000023351	rpusd4	99	68.782	ENSAOCG00000015409	rpusd4	97	68.782	Amphiprion_ocellaris
ENSXMAG00000023351	rpusd4	99	68.782	ENSAPEG00000018935	rpusd4	97	68.782	Amphiprion_percula
ENSXMAG00000023351	rpusd4	100	67.848	ENSATEG00000008059	rpusd4	97	67.848	Anabas_testudineus
ENSXMAG00000023351	rpusd4	71	50.714	ENSAPLG00000013250	RPUSD4	97	50.350	Anas_platyrhynchos
ENSXMAG00000023351	rpusd4	84	49.550	ENSACAG00000000189	RPUSD4	89	49.550	Anolis_carolinensis
ENSXMAG00000023351	rpusd4	95	46.296	ENSANAG00000024050	RPUSD4	98	46.296	Aotus_nancymaae
ENSXMAG00000023351	rpusd4	99	69.720	ENSACLG00000020996	rpusd4	99	69.720	Astatotilapia_calliptera
ENSXMAG00000023351	rpusd4	92	55.989	ENSAMXG00000031479	rpusd4	94	58.160	Astyanax_mexicanus
ENSXMAG00000023351	rpusd4	92	48.199	ENSBTAG00000020900	RPUSD4	93	48.199	Bos_taurus
ENSXMAG00000023351	rpusd4	85	48.968	ENSCJAG00000042850	RPUSD4	83	48.968	Callithrix_jacchus
ENSXMAG00000023351	rpusd4	94	48.780	ENSCAFG00000010488	RPUSD4	93	49.322	Canis_familiaris
ENSXMAG00000023351	rpusd4	94	48.780	ENSCAFG00020010621	RPUSD4	93	49.322	Canis_lupus_dingo
ENSXMAG00000023351	rpusd4	81	50.157	ENSCHIG00000009975	RPUSD4	93	47.368	Capra_hircus
ENSXMAG00000023351	rpusd4	93	48.780	ENSTSYG00000008456	RPUSD4	94	48.780	Carlito_syrichta
ENSXMAG00000023351	rpusd4	62	48.571	ENSCAPG00000006040	RPUSD4	93	48.571	Cavia_aperea
ENSXMAG00000023351	rpusd4	93	48.634	ENSCPOG00000014971	RPUSD4	94	48.634	Cavia_porcellus
ENSXMAG00000023351	rpusd4	85	48.673	ENSCCAG00000027838	RPUSD4	89	48.673	Cebus_capucinus
ENSXMAG00000023351	rpusd4	88	46.974	ENSCATG00000041570	RPUSD4	90	46.974	Cercocebus_atys
ENSXMAG00000023351	rpusd4	93	49.315	ENSCLAG00000016553	RPUSD4	94	49.315	Chinchilla_lanigera
ENSXMAG00000023351	rpusd4	93	45.902	ENSCSAG00000002274	RPUSD4	94	45.902	Chlorocebus_sabaeus
ENSXMAG00000023351	rpusd4	69	51.103	ENSCHOG00000010249	RPUSD4	94	51.103	Choloepus_hoffmanni
ENSXMAG00000023351	rpusd4	73	53.287	ENSCPBG00000011175	RPUSD4	99	53.287	Chrysemys_picta_bellii
ENSXMAG00000023351	rpusd4	69	37.993	ENSCSAVG00000000872	-	54	37.993	Ciona_savignyi
ENSXMAG00000023351	rpusd4	95	45.867	ENSCANG00000039684	RPUSD4	97	45.867	Colobus_angolensis_palliatus
ENSXMAG00000023351	rpusd4	87	50.585	ENSCGRG00001024141	Rpusd4	88	50.585	Cricetulus_griseus_chok1gshd
ENSXMAG00000023351	rpusd4	87	50.585	ENSCGRG00000014415	Rpusd4	88	50.585	Cricetulus_griseus_crigri
ENSXMAG00000023351	rpusd4	100	78.117	ENSCVAG00000008761	rpusd4	99	78.117	Cyprinodon_variegatus
ENSXMAG00000023351	rpusd4	100	78.117	ENSCVAG00000000392	rpusd4	98	80.857	Cyprinodon_variegatus
ENSXMAG00000023351	rpusd4	84	57.622	ENSDARG00000012674	rpusd4	90	57.622	Danio_rerio
ENSXMAG00000023351	rpusd4	87	48.547	ENSDNOG00000020026	RPUSD4	89	48.547	Dasypus_novemcinctus
ENSXMAG00000023351	rpusd4	99	44.643	ENSDORG00000016717	Rpusd4	97	45.153	Dipodomys_ordii
ENSXMAG00000023351	rpusd4	87	50.146	ENSETEG00000013953	RPUSD4	89	50.146	Echinops_telfairi
ENSXMAG00000023351	rpusd4	89	48.011	ENSEASG00005022982	RPUSD4	91	48.011	Equus_asinus_asinus
ENSXMAG00000023351	rpusd4	89	48.295	ENSECAG00000000557	RPUSD4	91	48.295	Equus_caballus
ENSXMAG00000023351	rpusd4	66	54.696	ENSEEUG00000014036	RPUSD4	68	54.696	Erinaceus_europaeus
ENSXMAG00000023351	rpusd4	94	57.373	ENSELUG00000008075	rpusd4	97	57.373	Esox_lucius
ENSXMAG00000023351	rpusd4	93	47.154	ENSFCAG00000029789	RPUSD4	95	47.425	Felis_catus
ENSXMAG00000023351	rpusd4	84	47.879	ENSFALG00000005171	RPUSD4	96	47.879	Ficedula_albicollis
ENSXMAG00000023351	rpusd4	87	49.708	ENSFDAG00000014307	RPUSD4	89	49.708	Fukomys_damarensis
ENSXMAG00000023351	rpusd4	100	79.487	ENSFHEG00000004329	rpusd4	100	79.487	Fundulus_heteroclitus
ENSXMAG00000023351	rpusd4	84	64.939	ENSGMOG00000017726	rpusd4	98	64.583	Gadus_morhua
ENSXMAG00000023351	rpusd4	71	54.286	ENSGALG00000024326	RPUSD4	92	48.955	Gallus_gallus
ENSXMAG00000023351	rpusd4	100	94.615	ENSGAFG00000021559	rpusd4	100	94.615	Gambusia_affinis
ENSXMAG00000023351	rpusd4	88	69.883	ENSGACG00000001657	rpusd4	97	75.451	Gasterosteus_aculeatus
ENSXMAG00000023351	rpusd4	92	49.448	ENSGAGG00000000132	RPUSD4	97	49.448	Gopherus_agassizii
ENSXMAG00000023351	rpusd4	84	50.301	ENSGGOG00000016494	RPUSD4	90	48.851	Gorilla_gorilla
ENSXMAG00000023351	rpusd4	99	69.720	ENSHBUG00000022838	rpusd4	99	69.720	Haplochromis_burtoni
ENSXMAG00000023351	rpusd4	93	48.087	ENSHGLG00000002285	RPUSD4	94	48.087	Heterocephalus_glaber_female
ENSXMAG00000023351	rpusd4	93	48.087	ENSHGLG00100006385	RPUSD4	94	48.087	Heterocephalus_glaber_male
ENSXMAG00000023351	rpusd4	99	64.541	ENSHCOG00000006612	rpusd4	99	64.541	Hippocampus_comes
ENSXMAG00000023351	rpusd4	99	52.174	ENSIPUG00000023879	rusd4	99	52.174	Ictalurus_punctatus
ENSXMAG00000023351	rpusd4	92	49.171	ENSSTOG00000025280	RPUSD4	96	49.171	Ictidomys_tridecemlineatus
ENSXMAG00000023351	rpusd4	88	48.442	ENSJJAG00000018673	Rpusd4	94	48.442	Jaculus_jaculus
ENSXMAG00000023351	rpusd4	99	67.929	ENSKMAG00000021805	rpusd4	100	67.929	Kryptolebias_marmoratus
ENSXMAG00000023351	rpusd4	96	67.602	ENSLBEG00000020394	rpusd4	94	74.556	Labrus_bergylta
ENSXMAG00000023351	rpusd4	84	50.755	ENSLACG00000011028	RPUSD4	90	48.361	Latimeria_chalumnae
ENSXMAG00000023351	rpusd4	86	45.748	ENSLOCG00000003124	rpusd4	89	45.748	Lepisosteus_oculatus
ENSXMAG00000023351	rpusd4	87	51.014	ENSLAFG00000005211	RPUSD4	100	44.407	Loxodonta_africana
ENSXMAG00000023351	rpusd4	88	47.262	ENSMFAG00000039513	RPUSD4	90	47.262	Macaca_fascicularis
ENSXMAG00000023351	rpusd4	88	46.974	ENSMMUG00000007933	RPUSD4	90	46.974	Macaca_mulatta
ENSXMAG00000023351	rpusd4	88	47.550	ENSMNEG00000027414	RPUSD4	90	47.550	Macaca_nemestrina
ENSXMAG00000023351	rpusd4	87	48.105	ENSMLEG00000042461	RPUSD4	89	48.105	Mandrillus_leucophaeus
ENSXMAG00000023351	rpusd4	100	68.205	ENSMAMG00000023839	rpusd4	100	68.205	Mastacembelus_armatus
ENSXMAG00000023351	rpusd4	99	69.720	ENSMZEG00005011999	rpusd4	99	69.720	Maylandia_zebra
ENSXMAG00000023351	rpusd4	71	53.214	ENSMGAG00000000840	RPUSD4	98	48.457	Meleagris_gallopavo
ENSXMAG00000023351	rpusd4	84	51.205	ENSMAUG00000010280	Rpusd4	86	51.205	Mesocricetus_auratus
ENSXMAG00000023351	rpusd4	85	49.853	ENSMICG00000015979	RPUSD4	90	52.961	Microcebus_murinus
ENSXMAG00000023351	rpusd4	84	49.849	ENSMOCG00000000661	Rpusd4	85	49.849	Microtus_ochrogaster
ENSXMAG00000023351	rpusd4	82	71.963	ENSMMOG00000021731	rpusd4	95	71.963	Mola_mola
ENSXMAG00000023351	rpusd4	82	52.795	ENSMODG00000004521	RPUSD4	80	52.795	Monodelphis_domestica
ENSXMAG00000023351	rpusd4	79	73.377	ENSMALG00000005839	rpusd4	98	71.118	Monopterus_albus
ENSXMAG00000023351	rpusd4	86	49.704	MGP_CAROLIEiJ_G0031954	Rpusd4	87	49.704	Mus_caroli
ENSXMAG00000023351	rpusd4	86	50.445	ENSMUSG00000032044	Rpusd4	87	50.445	Mus_musculus
ENSXMAG00000023351	rpusd4	85	50.000	MGP_PahariEiJ_G0014819	Rpusd4	86	50.000	Mus_pahari
ENSXMAG00000023351	rpusd4	86	50.148	MGP_SPRETEiJ_G0033078	Rpusd4	87	50.148	Mus_spretus
ENSXMAG00000023351	rpusd4	85	50.445	ENSMPUG00000006608	RPUSD4	87	50.445	Mustela_putorius_furo
ENSXMAG00000023351	rpusd4	65	50.000	ENSMLUG00000029348	-	99	50.000	Myotis_lucifugus
ENSXMAG00000023351	rpusd4	83	50.153	ENSMLUG00000017328	-	85	50.153	Myotis_lucifugus
ENSXMAG00000023351	rpusd4	87	50.435	ENSNGAG00000020847	Rpusd4	89	50.435	Nannospalax_galili
ENSXMAG00000023351	rpusd4	85	75.152	ENSNBRG00000005207	rpusd4	95	75.152	Neolamprologus_brichardi
ENSXMAG00000023351	rpusd4	88	47.839	ENSNLEG00000007465	RPUSD4	90	47.839	Nomascus_leucogenys
ENSXMAG00000023351	rpusd4	96	47.493	ENSMEUG00000004370	RPUSD4	96	47.493	Notamacropus_eugenii
ENSXMAG00000023351	rpusd4	94	47.170	ENSODEG00000004577	RPUSD4	95	47.170	Octodon_degus
ENSXMAG00000023351	rpusd4	99	70.663	ENSONIG00000018879	rpusd4	99	70.663	Oreochromis_niloticus
ENSXMAG00000023351	rpusd4	75	48.993	ENSOANG00000007247	RPUSD4	95	48.837	Ornithorhynchus_anatinus
ENSXMAG00000023351	rpusd4	98	48.329	ENSOCUG00000017039	RPUSD4	98	48.205	Oryctolagus_cuniculus
ENSXMAG00000023351	rpusd4	98	63.753	ENSORLG00000002750	rpusd4	95	67.049	Oryzias_latipes
ENSXMAG00000023351	rpusd4	91	67.787	ENSORLG00020002044	rpusd4	88	67.598	Oryzias_latipes_hni
ENSXMAG00000023351	rpusd4	93	66.485	ENSORLG00015020034	rpusd4	90	66.485	Oryzias_latipes_hsok
ENSXMAG00000023351	rpusd4	92	70.360	ENSOMEG00000004861	rpusd4	88	70.360	Oryzias_melastigma
ENSXMAG00000023351	rpusd4	84	50.606	ENSOGAG00000008922	RPUSD4	86	50.448	Otolemur_garnettii
ENSXMAG00000023351	rpusd4	81	50.157	ENSOARG00000012238	RPUSD4	92	47.368	Ovis_aries
ENSXMAG00000023351	rpusd4	84	50.000	ENSPPAG00000042883	RPUSD4	81	49.555	Pan_paniscus
ENSXMAG00000023351	rpusd4	93	47.425	ENSPPRG00000003081	RPUSD4	95	47.425	Panthera_pardus
ENSXMAG00000023351	rpusd4	93	47.425	ENSPTIG00000012059	RPUSD4	95	47.425	Panthera_tigris_altaica
ENSXMAG00000023351	rpusd4	84	50.000	ENSPTRG00000004454	RPUSD4	97	46.257	Pan_troglodytes
ENSXMAG00000023351	rpusd4	93	45.902	ENSPANG00000015040	RPUSD4	94	45.902	Papio_anubis
ENSXMAG00000023351	rpusd4	99	52.273	ENSPKIG00000023986	rpusd4	99	52.273	Paramormyrops_kingsleyae
ENSXMAG00000023351	rpusd4	75	52.862	ENSPSIG00000014268	RPUSD4	93	52.862	Pelodiscus_sinensis
ENSXMAG00000023351	rpusd4	99	60.358	ENSPMGG00000002806	rpusd4	99	60.358	Periophthalmus_magnuspinnatus
ENSXMAG00000023351	rpusd4	85	45.238	ENSPEMG00000000278	Rpusd4	86	45.238	Peromyscus_maniculatus_bairdii
ENSXMAG00000023351	rpusd4	79	40.828	ENSPMAG00000008183	rpusd4	97	40.828	Petromyzon_marinus
ENSXMAG00000023351	rpusd4	86	51.929	ENSPCIG00000010212	RPUSD4	90	51.929	Phascolarctos_cinereus
ENSXMAG00000023351	rpusd4	97	92.368	ENSPFOG00000019030	rpusd4	100	92.368	Poecilia_formosa
ENSXMAG00000023351	rpusd4	100	93.350	ENSPLAG00000016848	rpusd4	100	93.350	Poecilia_latipinna
ENSXMAG00000023351	rpusd4	100	92.327	ENSPMEG00000017534	rpusd4	100	92.327	Poecilia_mexicana
ENSXMAG00000023351	rpusd4	97	90.789	ENSPREG00000005689	rpusd4	98	90.789	Poecilia_reticulata
ENSXMAG00000023351	rpusd4	85	48.512	ENSPPYG00000004043	RPUSD4	87	48.512	Pongo_abelii
ENSXMAG00000023351	rpusd4	68	52.459	ENSPCAG00000000753	RPUSD4	71	52.459	Procavia_capensis
ENSXMAG00000023351	rpusd4	87	47.674	ENSPCOG00000020694	RPUSD4	90	47.674	Propithecus_coquereli
ENSXMAG00000023351	rpusd4	87	48.830	ENSPVAG00000000988	RPUSD4	89	48.830	Pteropus_vampyrus
ENSXMAG00000023351	rpusd4	97	71.883	ENSPNYG00000009652	rpusd4	96	71.883	Pundamilia_nyererei
ENSXMAG00000023351	rpusd4	94	55.285	ENSPNAG00000012264	rpusd4	94	55.285	Pygocentrus_nattereri
ENSXMAG00000023351	rpusd4	86	51.026	ENSRNOG00000011567	Rpusd4	88	51.026	Rattus_norvegicus
ENSXMAG00000023351	rpusd4	87	47.507	ENSRBIG00000034842	RPUSD4	90	46.974	Rhinopithecus_bieti
ENSXMAG00000023351	rpusd4	87	47.507	ENSRROG00000039753	RPUSD4	90	46.974	Rhinopithecus_roxellana
ENSXMAG00000023351	rpusd4	85	48.071	ENSSBOG00000030413	RPUSD4	88	48.071	Saimiri_boliviensis_boliviensis
ENSXMAG00000023351	rpusd4	76	53.020	ENSSHAG00000008304	RPUSD4	97	53.020	Sarcophilus_harrisii
ENSXMAG00000023351	rpusd4	86	56.509	ENSSFOG00015006203	rpusd4	91	56.509	Scleropages_formosus
ENSXMAG00000023351	rpusd4	100	65.570	ENSSMAG00000020978	rpusd4	100	65.570	Scophthalmus_maximus
ENSXMAG00000023351	rpusd4	99	67.857	ENSSDUG00000013399	rpusd4	100	67.857	Seriola_dumerili
ENSXMAG00000023351	rpusd4	99	67.857	ENSSLDG00000023507	rpusd4	100	67.857	Seriola_lalandi_dorsalis
ENSXMAG00000023351	rpusd4	75	54.882	ENSSPUG00000001401	RPUSD4	90	52.121	Sphenodon_punctatus
ENSXMAG00000023351	rpusd4	100	67.939	ENSSPAG00000012163	rpusd4	100	67.939	Stegastes_partitus
ENSXMAG00000023351	rpusd4	96	46.154	ENSSSCG00000015233	RPUSD4	95	46.154	Sus_scrofa
ENSXMAG00000023351	rpusd4	77	50.667	ENSTGUG00000000773	RPUSD4	99	50.667	Taeniopygia_guttata
ENSXMAG00000023351	rpusd4	95	67.027	ENSTRUG00000012283	rpusd4	93	67.027	Takifugu_rubripes
ENSXMAG00000023351	rpusd4	99	64.646	ENSTNIG00000014676	rpusd4	100	64.646	Tetraodon_nigroviridis
ENSXMAG00000023351	rpusd4	82	49.846	ENSTTRG00000001555	RPUSD4	85	49.846	Tursiops_truncatus
ENSXMAG00000023351	rpusd4	96	47.480	ENSUMAG00000002219	RPUSD4	95	47.480	Ursus_maritimus
ENSXMAG00000023351	rpusd4	61	47.917	ENSVPAG00000001066	RPUSD4	87	47.917	Vicugna_pacos
ENSXMAG00000023351	rpusd4	94	48.509	ENSVVUG00000020101	RPUSD4	93	49.051	Vulpes_vulpes
ENSXMAG00000023351	rpusd4	100	98.462	ENSXCOG00000004676	rpusd4	100	98.462	Xiphophorus_couchianus