EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000023386 (Gene tree)
Gene ID: 102231800
Gene Symbol: si:ch211-166g5.4
Alias: -
Full Name: myc-associated zinc finger protein-like
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 8366 bases
Position: chr10:3917077-3925442
Accession: 102231800
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000034911	zf-C2H2	PF00096.26	1.6e-29	1	5
ENSXMAP00000034911	zf-C2H2	PF00096.26	1.6e-29	2	5
ENSXMAP00000034911	zf-C2H2	PF00096.26	1.6e-29	3	5
ENSXMAP00000034911	zf-C2H2	PF00096.26	1.6e-29	4	5
ENSXMAP00000034911	zf-C2H2	PF00096.26	1.6e-29	5	5
ENSXMAP00000034911	zf-met	PF12874.7	5.5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000021918	-	1449	XM_005810613	ENSXMAP00000034911	482 (aa)	XP_005810670	-

Gene Model

Click here to download ENSXMAG00000023386's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000023386's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000023386	si:ch211-166g5.4	100	89.883	ENSCVAG00000015597	si:ch211-166g5.4	100	89.883	Cyprinodon_variegatus
ENSXMAG00000023386	si:ch211-166g5.4	99	69.877	ENSDARG00000063555	si:ch211-166g5.4	100	80.586	Danio_rerio
ENSXMAG00000023386	si:ch211-166g5.4	99	62.992	ENSELUG00000024246	MAZ	97	63.817	Esox_lucius
ENSXMAG00000023386	si:ch211-166g5.4	100	76.634	ENSELUG00000022514	si:ch211-166g5.4	100	78.218	Esox_lucius
ENSXMAG00000023386	si:ch211-166g5.4	55	74.502	ENSFHEG00000000918	MAZ	96	74.104	Fundulus_heteroclitus
ENSXMAG00000023386	si:ch211-166g5.4	99	94.070	ENSGAFG00000000293	si:ch211-166g5.4	99	94.070	Gambusia_affinis
ENSXMAG00000023386	si:ch211-166g5.4	89	56.784	ENSGACG00000014840	maza	95	80.498	Gasterosteus_aculeatus
ENSXMAG00000023386	si:ch211-166g5.4	79	46.803	ENSLACG00000010161	MAZ	91	49.392	Latimeria_chalumnae
ENSXMAG00000023386	si:ch211-166g5.4	55	77.154	ENSMAMG00000018743	-	88	77.154	Mastacembelus_armatus
ENSXMAG00000023386	si:ch211-166g5.4	59	52.308	ENSMEUG00000009482	MAZ	73	40.000	Notamacropus_eugenii
ENSXMAG00000023386	si:ch211-166g5.4	100	66.667	ENSPKIG00000018202	-	93	74.275	Paramormyrops_kingsleyae
ENSXMAG00000023386	si:ch211-166g5.4	100	92.986	ENSPFOG00000005397	si:ch211-166g5.4	100	92.986	Poecilia_formosa
ENSXMAG00000023386	si:ch211-166g5.4	99	93.117	ENSPREG00000023113	si:ch211-166g5.4	98	93.117	Poecilia_reticulata
ENSXMAG00000023386	si:ch211-166g5.4	99	71.253	ENSPNAG00000004042	si:ch211-166g5.4	90	86.531	Pygocentrus_nattereri
ENSXMAG00000023386	si:ch211-166g5.4	79	65.810	ENSSFOG00015021699	si:ch211-166g5.4	100	64.781	Scleropages_formosus
ENSXMAG00000023386	si:ch211-166g5.4	73	55.254	ENSSPUG00000010618	MAZ	70	50.754	Sphenodon_punctatus