EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000023447 (Gene tree)
Gene ID: 102216569
Gene Symbol: sall3a
Alias: sall3
Full Name: spalt like transcription factor 3
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 15824 bases
Position: chr3:25976415-25992238
Accession: 102216569
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000022797	zf-C2H2	PF00096.26	1.1e-24	1	5
ENSXMAP00000022797	zf-C2H2	PF00096.26	1.1e-24	2	5
ENSXMAP00000022797	zf-C2H2	PF00096.26	1.1e-24	3	5
ENSXMAP00000022797	zf-C2H2	PF00096.26	1.1e-24	4	5
ENSXMAP00000022797	zf-C2H2	PF00096.26	1.1e-24	5	5
ENSXMAP00000030010	zf-C2H2	PF00096.26	8e-22	1	4
ENSXMAP00000030010	zf-C2H2	PF00096.26	8e-22	2	4
ENSXMAP00000030010	zf-C2H2	PF00096.26	8e-22	3	4
ENSXMAP00000030010	zf-C2H2	PF00096.26	8e-22	4	4
ENSXMAP00000022797	zf-met	PF12874.7	8.5e-14	1	1
ENSXMAP00000030010	zf-met	PF12874.7	1.8e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000041925	-	7180	-	ENSXMAP00000030010	1236 (aa)	-	-
ENSXMAT00000039347	-	6578	XM_005799023	ENSXMAP00000022797	1338 (aa)	XP_005799080	UPI0003B3A2BC

Gene Model

Click here to download ENSXMAG00000023447's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000023447's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000023447	sall3a	70	75.781	ENSG00000256463	SALL3	100	67.562	Homo_sapiens
ENSXMAG00000023447	sall3a	100	51.216	ENSAPOG00000004264	sall3b	70	57.508	Acanthochromis_polyacanthus
ENSXMAG00000023447	sall3a	98	88.435	ENSAPOG00000020922	sall3a	97	88.209	Acanthochromis_polyacanthus
ENSXMAG00000023447	sall3a	96	61.776	ENSAMEG00000010206	SALL3	98	74.297	Ailuropoda_melanoleuca
ENSXMAG00000023447	sall3a	74	88.961	ENSACIG00000014041	sall3a	98	89.301	Amphilophus_citrinellus
ENSXMAG00000023447	sall3a	75	59.105	ENSACIG00000019407	sall3b	99	59.018	Amphilophus_citrinellus
ENSXMAG00000023447	sall3a	98	87.677	ENSAOCG00000010863	sall3a	96	90.141	Amphiprion_ocellaris
ENSXMAG00000023447	sall3a	100	51.137	ENSAOCG00000012779	sall3b	69	57.833	Amphiprion_ocellaris
ENSXMAG00000023447	sall3a	75	57.804	ENSAPEG00000018170	sall3b	99	57.189	Amphiprion_percula
ENSXMAG00000023447	sall3a	100	90.821	ENSAPEG00000019278	sall3a	100	90.746	Amphiprion_percula
ENSXMAG00000023447	sall3a	68	59.483	ENSATEG00000004914	sall3b	69	59.743	Anabas_testudineus
ENSXMAG00000023447	sall3a	100	88.955	ENSATEG00000024524	sall3a	98	97.436	Anabas_testudineus
ENSXMAG00000023447	sall3a	98	62.999	ENSAPLG00000013214	SALL3	99	62.971	Anas_platyrhynchos
ENSXMAG00000023447	sall3a	100	62.925	ENSACAG00000000478	SALL3	100	62.537	Anolis_carolinensis
ENSXMAG00000023447	sall3a	100	89.179	ENSACLG00000022451	sall3a	100	89.254	Astatotilapia_calliptera
ENSXMAG00000023447	sall3a	68	58.262	ENSACLG00000001619	sall3b	69	58.654	Astatotilapia_calliptera
ENSXMAG00000023447	sall3a	100	73.131	ENSAMXG00000011185	sall3a	98	80.000	Astyanax_mexicanus
ENSXMAG00000023447	sall3a	61	64.033	ENSAMXG00000035442	sall3b	84	64.033	Astyanax_mexicanus
ENSXMAG00000023447	sall3a	99	72.157	ENSBTAG00000050200	SALL3	100	72.157	Bos_taurus
ENSXMAG00000023447	sall3a	70	75.391	ENSCJAG00000007332	SALL3	71	75.391	Callithrix_jacchus
ENSXMAG00000023447	sall3a	71	67.570	ENSCAFG00000000013	SALL3	100	61.221	Canis_familiaris
ENSXMAG00000023447	sall3a	71	74.609	ENSCAFG00020015092	SALL3	99	74.609	Canis_lupus_dingo
ENSXMAG00000023447	sall3a	70	72.549	ENSCHIG00000000145	SALL3	73	72.549	Capra_hircus
ENSXMAG00000023447	sall3a	80	65.696	ENSTSYG00000028846	SALL3	99	66.415	Carlito_syrichta
ENSXMAG00000023447	sall3a	82	75.781	ENSCAPG00000006496	SALL3	94	70.652	Cavia_aperea
ENSXMAG00000023447	sall3a	71	67.015	ENSCCAG00000034863	SALL3	71	67.784	Cebus_capucinus
ENSXMAG00000023447	sall3a	70	75.391	ENSCATG00000029727	SALL3	99	68.132	Cercocebus_atys
ENSXMAG00000023447	sall3a	70	68.058	ENSCLAG00000007727	SALL3	73	68.636	Chinchilla_lanigera
ENSXMAG00000023447	sall3a	70	75.391	ENSCSAG00000018244	SALL3	71	75.391	Chlorocebus_sabaeus
ENSXMAG00000023447	sall3a	62	70.356	ENSCHOG00000013939	-	91	70.356	Choloepus_hoffmanni
ENSXMAG00000023447	sall3a	99	78.125	ENSCPBG00000003657	SALL3	99	78.125	Chrysemys_picta_bellii
ENSXMAG00000023447	sall3a	73	73.684	ENSCANG00000030302	SALL3	99	73.684	Colobus_angolensis_palliatus
ENSXMAG00000023447	sall3a	99	76.172	ENSCGRG00001018203	Sall3	99	76.172	Cricetulus_griseus_chok1gshd
ENSXMAG00000023447	sall3a	98	61.249	ENSCGRG00000017127	Sall3	99	60.977	Cricetulus_griseus_crigri
ENSXMAG00000023447	sall3a	72	65.000	ENSCSEG00000009569	sall3b	96	65.000	Cynoglossus_semilaevis
ENSXMAG00000023447	sall3a	100	87.025	ENSCSEG00000009058	sall3a	100	86.950	Cynoglossus_semilaevis
ENSXMAG00000023447	sall3a	75	90.564	ENSCVAG00000009684	sall3a	96	90.919	Cyprinodon_variegatus
ENSXMAG00000023447	sall3a	91	90.196	ENSCVAG00000017005	sall3b	91	72.941	Cyprinodon_variegatus
ENSXMAG00000023447	sall3a	100	51.729	ENSDARG00000057586	sall3b	100	51.582	Danio_rerio
ENSXMAG00000023447	sall3a	100	66.444	ENSDARG00000079613	sall3a	100	66.370	Danio_rerio
ENSXMAG00000023447	sall3a	69	73.494	ENSDNOG00000025483	SALL3	96	73.092	Dasypus_novemcinctus
ENSXMAG00000023447	sall3a	68	70.039	ENSDORG00000002702	Sall3	86	70.930	Dipodomys_ordii
ENSXMAG00000023447	sall3a	70	76.316	ENSETEG00000001481	SALL3	92	76.316	Echinops_telfairi
ENSXMAG00000023447	sall3a	100	62.214	ENSEASG00005002071	SALL3	100	61.328	Equus_asinus_asinus
ENSXMAG00000023447	sall3a	100	61.919	ENSECAG00000015414	SALL3	89	59.488	Equus_caballus
ENSXMAG00000023447	sall3a	100	74.963	ENSELUG00000020351	sall3a	100	75.347	Esox_lucius
ENSXMAG00000023447	sall3a	100	52.190	ENSELUG00000009541	sall3b	100	51.962	Esox_lucius
ENSXMAG00000023447	sall3a	99	73.307	ENSFCAG00000028839	SALL3	99	73.307	Felis_catus
ENSXMAG00000023447	sall3a	100	62.941	ENSFALG00000013343	SALL3	70	70.119	Ficedula_albicollis
ENSXMAG00000023447	sall3a	98	78.760	ENSGMOG00000006649	sall3a	100	78.744	Gadus_morhua
ENSXMAG00000023447	sall3a	99	77.734	ENSGALG00000041404	SALL3	99	77.734	Gallus_gallus
ENSXMAG00000023447	sall3a	68	48.257	ENSGAFG00000014435	-	91	61.224	Gambusia_affinis
ENSXMAG00000023447	sall3a	98	93.704	ENSGAFG00000001581	sall3a	97	94.908	Gambusia_affinis
ENSXMAG00000023447	sall3a	98	85.971	ENSGACG00000005503	sall3a	98	85.971	Gasterosteus_aculeatus
ENSXMAG00000023447	sall3a	94	61.538	ENSGACG00000002533	sall3b	73	55.041	Gasterosteus_aculeatus
ENSXMAG00000023447	sall3a	100	63.100	ENSGAGG00000000925	SALL3	100	63.193	Gopherus_agassizii
ENSXMAG00000023447	sall3a	70	75.781	ENSGGOG00000008127	SALL3	99	70.330	Gorilla_gorilla
ENSXMAG00000023447	sall3a	100	89.328	ENSHBUG00000004486	sall3a	100	89.403	Haplochromis_burtoni
ENSXMAG00000023447	sall3a	75	58.529	ENSHBUG00000018127	sall3b	99	58.672	Haplochromis_burtoni
ENSXMAG00000023447	sall3a	100	59.926	ENSHGLG00000000824	SALL3	71	68.138	Heterocephalus_glaber_female
ENSXMAG00000023447	sall3a	100	58.088	ENSHGLG00100008694	SALL3	90	68.138	Heterocephalus_glaber_male
ENSXMAG00000023447	sall3a	89	64.000	ENSHCOG00000004745	sall3b	62	78.531	Hippocampus_comes
ENSXMAG00000023447	sall3a	97	87.405	ENSHCOG00000010423	sall3a	100	87.405	Hippocampus_comes
ENSXMAG00000023447	sall3a	100	72.432	ENSIPUG00000003378	sall3	100	72.727	Ictalurus_punctatus
ENSXMAG00000023447	sall3a	71	51.268	ENSIPUG00000003006	sall3b	69	50.864	Ictalurus_punctatus
ENSXMAG00000023447	sall3a	99	60.606	ENSSTOG00000004145	SALL3	71	67.922	Ictidomys_tridecemlineatus
ENSXMAG00000023447	sall3a	99	76.172	ENSJJAG00000014351	Sall3	88	72.566	Jaculus_jaculus
ENSXMAG00000023447	sall3a	100	91.555	ENSKMAG00000003846	sall3a	99	93.443	Kryptolebias_marmoratus
ENSXMAG00000023447	sall3a	68	52.516	ENSKMAG00000012418	sall3b	70	52.626	Kryptolebias_marmoratus
ENSXMAG00000023447	sall3a	100	88.051	ENSLBEG00000005152	sall3a	100	88.051	Labrus_bergylta
ENSXMAG00000023447	sall3a	75	58.199	ENSLBEG00000015706	sall3b	99	57.419	Labrus_bergylta
ENSXMAG00000023447	sall3a	100	69.095	ENSLOCG00000007831	sall3a	100	68.704	Lepisosteus_oculatus
ENSXMAG00000023447	sall3a	96	72.566	ENSLAFG00000013521	SALL3	73	75.391	Loxodonta_africana
ENSXMAG00000023447	sall3a	77	75.391	ENSMFAG00000031402	SALL3	95	75.391	Macaca_fascicularis
ENSXMAG00000023447	sall3a	77	57.631	ENSMAMG00000006101	sall3b	100	57.296	Mastacembelus_armatus
ENSXMAG00000023447	sall3a	68	82.787	ENSMAMG00000001276	sall3a	50	92.969	Mastacembelus_armatus
ENSXMAG00000023447	sall3a	68	58.369	ENSMZEG00005026224	sall3b	69	58.761	Maylandia_zebra
ENSXMAG00000023447	sall3a	100	89.179	ENSMZEG00005007586	sall3a	100	89.254	Maylandia_zebra
ENSXMAG00000023447	sall3a	100	63.026	ENSMGAG00000002297	SALL3	100	63.220	Meleagris_gallopavo
ENSXMAG00000023447	sall3a	99	75.391	ENSMAUG00000011828	Sall3	99	75.391	Mesocricetus_auratus
ENSXMAG00000023447	sall3a	78	66.955	ENSMICG00000017395	SALL3	94	75.294	Microcebus_murinus
ENSXMAG00000023447	sall3a	100	60.735	ENSMOCG00000013205	Sall3	70	69.730	Microtus_ochrogaster
ENSXMAG00000023447	sall3a	74	87.229	ENSMMOG00000003253	sall3a	99	87.445	Mola_mola
ENSXMAG00000023447	sall3a	82	57.585	ENSMMOG00000014246	sall3b	99	57.097	Mola_mola
ENSXMAG00000023447	sall3a	100	62.979	ENSMODG00000012231	SALL3	100	62.840	Monodelphis_domestica
ENSXMAG00000023447	sall3a	97	87.558	ENSMALG00000003343	sall3a	99	87.558	Monopterus_albus
ENSXMAG00000023447	sall3a	68	57.500	ENSMALG00000015200	sall3b	68	57.066	Monopterus_albus
ENSXMAG00000023447	sall3a	100	61.901	MGP_CAROLIEiJ_G0022442	Sall3	100	61.975	Mus_caroli
ENSXMAG00000023447	sall3a	100	61.533	ENSMUSG00000024565	Sall3	100	61.561	Mus_musculus
ENSXMAG00000023447	sall3a	100	61.550	MGP_PahariEiJ_G0019170	Sall3	100	61.431	Mus_pahari
ENSXMAG00000023447	sall3a	100	61.516	MGP_SPRETEiJ_G0023357	Sall3	100	61.397	Mus_spretus
ENSXMAG00000023447	sall3a	83	62.467	ENSMPUG00000016646	SALL3	97	62.145	Mustela_putorius_furo
ENSXMAG00000023447	sall3a	98	72.266	ENSMLUG00000010582	SALL3	72	72.266	Myotis_lucifugus
ENSXMAG00000023447	sall3a	100	76.172	ENSNGAG00000023772	Sall3	99	76.172	Nannospalax_galili
ENSXMAG00000023447	sall3a	97	86.092	ENSNBRG00000008974	sall3a	100	86.168	Neolamprologus_brichardi
ENSXMAG00000023447	sall3a	75	58.742	ENSNBRG00000016034	sall3b	99	58.672	Neolamprologus_brichardi
ENSXMAG00000023447	sall3a	75	70.330	ENSNLEG00000008217	SALL3	99	70.330	Nomascus_leucogenys
ENSXMAG00000023447	sall3a	99	76.172	ENSODEG00000002692	SALL3	90	76.172	Octodon_degus
ENSXMAG00000023447	sall3a	68	58.486	ENSONIG00000013791	sall3b	69	58.485	Oreochromis_niloticus
ENSXMAG00000023447	sall3a	100	80.421	ENSONIG00000007305	sall3a	100	80.566	Oreochromis_niloticus
ENSXMAG00000023447	sall3a	71	64.607	ENSOCUG00000029398	SALL3	99	59.749	Oryctolagus_cuniculus
ENSXMAG00000023447	sall3a	89	63.462	ENSOCUG00000004364	-	91	63.462	Oryctolagus_cuniculus
ENSXMAG00000023447	sall3a	100	86.258	ENSORLG00000020718	sall3a	100	86.333	Oryzias_latipes
ENSXMAG00000023447	sall3a	90	63.462	ENSORLG00020015105	sall3b	60	63.462	Oryzias_latipes_hni
ENSXMAG00000023447	sall3a	98	84.091	ENSORLG00020001794	sall3a	100	83.788	Oryzias_latipes_hni
ENSXMAG00000023447	sall3a	77	70.000	ENSORLG00015005877	sall3b	80	68.681	Oryzias_latipes_hsok
ENSXMAG00000023447	sall3a	98	84.155	ENSORLG00015018152	sall3a	97	94.737	Oryzias_latipes_hsok
ENSXMAG00000023447	sall3a	100	86.921	ENSOMEG00000011390	sall3a	100	86.846	Oryzias_melastigma
ENSXMAG00000023447	sall3a	69	76.078	ENSOGAG00000031681	SALL3	71	76.078	Otolemur_garnettii
ENSXMAG00000023447	sall3a	76	70.312	ENSOARG00000004353	SALL3	93	70.312	Ovis_aries
ENSXMAG00000023447	sall3a	73	73.770	ENSPPAG00000029586	-	98	73.770	Pan_paniscus
ENSXMAG00000023447	sall3a	70	75.781	ENSPTRG00000010126	SALL3	99	70.330	Pan_troglodytes
ENSXMAG00000023447	sall3a	70	75.000	ENSPANG00000006485	SALL3	99	65.000	Papio_anubis
ENSXMAG00000023447	sall3a	94	64.000	ENSPKIG00000018271	SALL3	96	74.510	Paramormyrops_kingsleyae
ENSXMAG00000023447	sall3a	97	82.639	ENSPKIG00000013427	sall3a	99	82.639	Paramormyrops_kingsleyae
ENSXMAG00000023447	sall3a	98	63.027	ENSPSIG00000008556	SALL3	99	63.889	Pelodiscus_sinensis
ENSXMAG00000023447	sall3a	67	59.615	ENSPMGG00000002913	sall3b	96	53.448	Periophthalmus_magnuspinnatus
ENSXMAG00000023447	sall3a	98	82.170	ENSPMGG00000017042	sall3a	98	82.322	Periophthalmus_magnuspinnatus
ENSXMAG00000023447	sall3a	99	76.562	ENSPEMG00000022799	Sall3	99	76.562	Peromyscus_maniculatus_bairdii
ENSXMAG00000023447	sall3a	99	77.344	ENSPCIG00000002472	SALL3	99	77.344	Phascolarctos_cinereus
ENSXMAG00000023447	sall3a	68	48.120	ENSPFOG00000013292	sall3b	100	43.879	Poecilia_formosa
ENSXMAG00000023447	sall3a	100	97.982	ENSPFOG00000019127	sall3a	100	97.982	Poecilia_formosa
ENSXMAG00000023447	sall3a	100	97.833	ENSPLAG00000018123	sall3a	100	97.833	Poecilia_latipinna
ENSXMAG00000023447	sall3a	68	48.116	ENSPLAG00000013919	sall3b	100	43.870	Poecilia_latipinna
ENSXMAG00000023447	sall3a	72	48.276	ENSPMEG00000023703	sall3b	59	87.500	Poecilia_mexicana
ENSXMAG00000023447	sall3a	100	97.249	ENSPMEG00000014946	sall3a	99	97.249	Poecilia_mexicana
ENSXMAG00000023447	sall3a	100	96.443	ENSPREG00000014420	sall3a	99	96.443	Poecilia_reticulata
ENSXMAG00000023447	sall3a	68	47.701	ENSPREG00000015079	sall3b	70	48.026	Poecilia_reticulata
ENSXMAG00000023447	sall3a	70	68.004	ENSPPYG00000009253	SALL3	73	67.669	Pongo_abelii
ENSXMAG00000023447	sall3a	95	64.000	ENSPCAG00000006522	SALL3	73	63.179	Procavia_capensis
ENSXMAG00000023447	sall3a	75	74.902	ENSPCOG00000012553	SALL3	97	74.902	Propithecus_coquereli
ENSXMAG00000023447	sall3a	96	67.857	ENSPVAG00000014645	SALL3	73	52.049	Pteropus_vampyrus
ENSXMAG00000023447	sall3a	75	58.529	ENSPNYG00000005353	sall3b	99	58.672	Pundamilia_nyererei
ENSXMAG00000023447	sall3a	97	86.092	ENSPNYG00000012783	sall3a	100	86.168	Pundamilia_nyererei
ENSXMAG00000023447	sall3a	100	49.817	ENSPNAG00000017141	sall3b	100	49.599	Pygocentrus_nattereri
ENSXMAG00000023447	sall3a	86	76.562	ENSRNOG00000026116	Sall3	96	76.562	Rattus_norvegicus
ENSXMAG00000023447	sall3a	75	76.172	ENSRROG00000034130	SALL3	95	76.172	Rhinopithecus_roxellana
ENSXMAG00000023447	sall3a	72	68.627	ENSSBOG00000023380	SALL3	99	68.627	Saimiri_boliviensis_boliviensis
ENSXMAG00000023447	sall3a	100	62.528	ENSSHAG00000015872	SALL3	100	63.985	Sarcophilus_harrisii
ENSXMAG00000023447	sall3a	80	92.857	ENSSFOG00015012223	sall3a	99	92.857	Scleropages_formosus
ENSXMAG00000023447	sall3a	82	80.000	ENSSFOG00015009159	SALL3	97	68.354	Scleropages_formosus
ENSXMAG00000023447	sall3a	100	88.914	ENSSMAG00000007674	sall3a	100	88.914	Scophthalmus_maximus
ENSXMAG00000023447	sall3a	68	58.468	ENSSMAG00000019762	sall3b	70	58.360	Scophthalmus_maximus
ENSXMAG00000023447	sall3a	100	86.736	ENSSDUG00000011099	sall3a	100	86.811	Seriola_dumerili
ENSXMAG00000023447	sall3a	75	60.192	ENSSDUG00000010584	sall3b	99	59.936	Seriola_dumerili
ENSXMAG00000023447	sall3a	68	60.343	ENSSLDG00000016800	sall3b	70	60.129	Seriola_lalandi_dorsalis
ENSXMAG00000023447	sall3a	100	86.736	ENSSLDG00000012706	sall3a	100	86.811	Seriola_lalandi_dorsalis
ENSXMAG00000023447	sall3a	74	58.760	ENSSPAG00000003172	sall3b	100	58.235	Stegastes_partitus
ENSXMAG00000023447	sall3a	94	93.200	ENSSPAG00000013114	sall3a	100	91.571	Stegastes_partitus
ENSXMAG00000023447	sall3a	99	71.373	ENSSSCG00000004858	SALL3	100	71.373	Sus_scrofa
ENSXMAG00000023447	sall3a	98	60.090	ENSTGUG00000006541	SALL3	99	60.030	Taeniopygia_guttata
ENSXMAG00000023447	sall3a	55	65.217	ENSTRUG00000003369	sall3b	61	65.217	Takifugu_rubripes
ENSXMAG00000023447	sall3a	72	93.023	ENSTRUG00000017423	sall3a	99	93.023	Takifugu_rubripes
ENSXMAG00000023447	sall3a	65	81.477	ENSTNIG00000001257	sall3a	100	78.712	Tetraodon_nigroviridis
ENSXMAG00000023447	sall3a	89	64.444	ENSTBEG00000008964	SALL3	53	63.855	Tupaia_belangeri
ENSXMAG00000023447	sall3a	70	68.217	ENSTTRG00000004958	SALL3	86	68.217	Tursiops_truncatus
ENSXMAG00000023447	sall3a	99	74.609	ENSUAMG00000016908	SALL3	99	72.388	Ursus_americanus
ENSXMAG00000023447	sall3a	79	85.714	ENSVVUG00000018838	SALL3	99	80.645	Vulpes_vulpes
ENSXMAG00000023447	sall3a	100	61.894	ENSXETG00000000845	sall3	69	70.486	Xenopus_tropicalis
ENSXMAG00000023447	sall3a	71	50.288	ENSXCOG00000018799	sall3b	89	64.865	Xiphophorus_couchianus
ENSXMAG00000023447	sall3a	98	90.327	ENSXCOG00000016907	sall3a	98	90.327	Xiphophorus_couchianus
ENSXMAG00000023447	sall3a	90	58.065	ENSXMAG00000000798	sall3b	97	50.461	Xiphophorus_maculatus