EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000023471 (Gene tree)
Gene ID: 102225964
Gene Symbol: rbfox1l
Alias: Fox-1|ZFmu1A11s|a2bp1l|hm:zeh0082|zeh0082
Full Name: RNA binding protein fox-1 homolog 1-like
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 19395 bases
Position: chr3:18998346-19017740
Accession: 102225964
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000030098	Fox-1_C	PF12414.8	6.3e-34	1	1
ENSXMAP00000030098	RRM_1	PF00076.22	1e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000031245	-	5799	XM_005798805	ENSXMAP00000030098	381 (aa)	XP_005798862	M4ACI8

Gene Model

Click here to download ENSXMAG00000023471's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000023471's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000023471	rbfox1l	97	89.757	ENSAPOG00000016304	rbfox1l	98	90.027	Acanthochromis_polyacanthus
ENSXMAG00000023471	rbfox1l	100	81.462	ENSACIG00000006441	rbfox1l	100	81.462	Amphilophus_citrinellus
ENSXMAG00000023471	rbfox1l	88	86.053	ENSAOCG00000020938	rbfox1l	99	85.757	Amphiprion_ocellaris
ENSXMAG00000023471	rbfox1l	100	90.601	ENSAPEG00000008232	rbfox1l	100	90.862	Amphiprion_percula
ENSXMAG00000023471	rbfox1l	100	85.379	ENSATEG00000022649	rbfox1l	100	85.379	Anabas_testudineus
ENSXMAG00000023471	rbfox1l	65	71.937	ENSACAG00000011931	-	91	72.332	Anolis_carolinensis
ENSXMAG00000023471	rbfox1l	100	88.512	ENSACLG00000021394	rbfox1l	100	88.512	Astatotilapia_calliptera
ENSXMAG00000023471	rbfox1l	100	84.974	ENSAMXG00000010470	rbfox1l	100	82.642	Astyanax_mexicanus
ENSXMAG00000023471	rbfox1l	65	69.565	ENSCPBG00000010944	-	100	59.126	Chrysemys_picta_bellii
ENSXMAG00000023471	rbfox1l	100	85.938	ENSCSEG00000018898	rbfox1l	100	85.417	Cynoglossus_semilaevis
ENSXMAG00000023471	rbfox1l	100	93.734	ENSCVAG00000007986	rbfox1l	100	93.734	Cyprinodon_variegatus
ENSXMAG00000023471	rbfox1l	100	81.606	ENSDARG00000021184	rbfox1l	100	80.570	Danio_rerio
ENSXMAG00000023471	rbfox1l	100	81.679	ENSELUG00000015077	rbfox1l	100	81.679	Esox_lucius
ENSXMAG00000023471	rbfox1l	79	97.561	ENSFHEG00000016557	rbfox1l	95	97.561	Fundulus_heteroclitus
ENSXMAG00000023471	rbfox1l	100	81.984	ENSGMOG00000005040	rbfox1l	100	81.984	Gadus_morhua
ENSXMAG00000023471	rbfox1l	92	98.295	ENSGAFG00000013211	rbfox1l	97	98.295	Gambusia_affinis
ENSXMAG00000023471	rbfox1l	100	88.773	ENSGACG00000010757	rbfox1l	100	88.773	Gasterosteus_aculeatus
ENSXMAG00000023471	rbfox1l	65	69.565	ENSGAGG00000012440	-	87	72.047	Gopherus_agassizii
ENSXMAG00000023471	rbfox1l	100	88.512	ENSHBUG00000013406	rbfox1l	100	88.512	Haplochromis_burtoni
ENSXMAG00000023471	rbfox1l	100	83.854	ENSHCOG00000020771	rbfox1l	100	84.635	Hippocampus_comes
ENSXMAG00000023471	rbfox1l	99	77.487	ENSIPUG00000000065	rbfox1l	99	78.771	Ictalurus_punctatus
ENSXMAG00000023471	rbfox1l	100	89.610	ENSKMAG00000005146	rbfox1l	100	88.831	Kryptolebias_marmoratus
ENSXMAG00000023471	rbfox1l	100	90.078	ENSLBEG00000017089	rbfox1l	100	90.078	Labrus_bergylta
ENSXMAG00000023471	rbfox1l	100	90.862	ENSMAMG00000019480	rbfox1l	100	90.862	Mastacembelus_armatus
ENSXMAG00000023471	rbfox1l	100	88.512	ENSMZEG00005016374	rbfox1l	100	88.512	Maylandia_zebra
ENSXMAG00000023471	rbfox1l	100	86.945	ENSMMOG00000016530	rbfox1l	100	86.684	Mola_mola
ENSXMAG00000023471	rbfox1l	100	85.640	ENSMALG00000009384	rbfox1l	100	85.640	Monopterus_albus
ENSXMAG00000023471	rbfox1l	100	87.467	ENSNBRG00000003346	rbfox1l	100	87.467	Neolamprologus_brichardi
ENSXMAG00000023471	rbfox1l	100	89.034	ENSONIG00000012754	rbfox1l	100	89.034	Oreochromis_niloticus
ENSXMAG00000023471	rbfox1l	100	89.295	ENSORLG00000011269	rbfox1l	100	89.295	Oryzias_latipes
ENSXMAG00000023471	rbfox1l	100	89.817	ENSORLG00020000162	rbfox1l	100	90.078	Oryzias_latipes_hni
ENSXMAG00000023471	rbfox1l	100	89.817	ENSORLG00015013464	rbfox1l	100	90.078	Oryzias_latipes_hsok
ENSXMAG00000023471	rbfox1l	100	90.078	ENSOMEG00000010584	rbfox1l	100	90.078	Oryzias_melastigma
ENSXMAG00000023471	rbfox1l	100	85.677	ENSPKIG00000012029	rbfox1l	100	84.375	Paramormyrops_kingsleyae
ENSXMAG00000023471	rbfox1l	100	81.510	ENSPMGG00000012082	rbfox1l	100	80.208	Periophthalmus_magnuspinnatus
ENSXMAG00000023471	rbfox1l	100	97.900	ENSPFOG00000009338	rbfox1l	100	97.900	Poecilia_formosa
ENSXMAG00000023471	rbfox1l	85	88.615	ENSPLAG00000012816	rbfox1l	99	88.615	Poecilia_latipinna
ENSXMAG00000023471	rbfox1l	100	93.963	ENSPMEG00000017597	rbfox1l	100	93.963	Poecilia_mexicana
ENSXMAG00000023471	rbfox1l	100	94.226	ENSPREG00000007940	rbfox1l	100	94.226	Poecilia_reticulata
ENSXMAG00000023471	rbfox1l	100	88.773	ENSPNYG00000002098	rbfox1l	100	88.773	Pundamilia_nyererei
ENSXMAG00000023471	rbfox1l	100	81.912	ENSPNAG00000001620	rbfox1l	100	81.912	Pygocentrus_nattereri
ENSXMAG00000023471	rbfox1l	100	81.039	ENSSFOG00015000675	rbfox1l	100	81.039	Scleropages_formosus
ENSXMAG00000023471	rbfox1l	100	87.696	ENSSMAG00000013090	rbfox1l	100	87.696	Scophthalmus_maximus
ENSXMAG00000023471	rbfox1l	100	85.861	ENSSDUG00000008705	rbfox1l	100	85.604	Seriola_dumerili
ENSXMAG00000023471	rbfox1l	100	86.340	ENSSLDG00000022256	rbfox1l	100	86.082	Seriola_lalandi_dorsalis
ENSXMAG00000023471	rbfox1l	100	90.078	ENSSPAG00000016620	rbfox1l	100	90.339	Stegastes_partitus
ENSXMAG00000023471	rbfox1l	96	83.514	ENSTRUG00000015905	rbfox1l	100	83.784	Takifugu_rubripes
ENSXMAG00000023471	rbfox1l	65	80.297	ENSTNIG00000008088	rbfox1l	100	82.900	Tetraodon_nigroviridis