EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000023617 (Gene tree)
Gene ID: 102226652
Gene Symbol: rab12
Alias: zgc:111945
Full Name: RAB12%2C member RAS oncogene family
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 11396 bases
Position: chr6:22950394-22961789
Accession: 102226652
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000025851	MMR_HSR1	PF01926.23	6.6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000023879	-	4359	XM_005801971	ENSXMAP00000025851	244 (aa)	XP_005802028	UPI0003B353F5

Gene Model

Click here to download ENSXMAG00000023617's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000023617's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000023617	rab12	100	78.543	ENSG00000206418	RAB12	100	82.591	Homo_sapiens
ENSXMAG00000023617	rab12	89	76.712	ENSAMEG00000007452	RAB12	94	80.365	Ailuropoda_melanoleuca
ENSXMAG00000023617	rab12	100	96.311	ENSACIG00000020616	rab12	100	96.311	Amphilophus_citrinellus
ENSXMAG00000023617	rab12	100	94.672	ENSAOCG00000002130	rab12	100	94.262	Amphiprion_ocellaris
ENSXMAG00000023617	rab12	100	94.672	ENSAPEG00000013255	rab12	100	94.262	Amphiprion_percula
ENSXMAG00000023617	rab12	100	94.262	ENSATEG00000019683	rab12	100	93.852	Anabas_testudineus
ENSXMAG00000023617	rab12	82	88.000	ENSACAG00000003360	RAB12	88	85.841	Anolis_carolinensis
ENSXMAG00000023617	rab12	100	95.902	ENSACLG00000007696	rab12	100	95.902	Astatotilapia_calliptera
ENSXMAG00000023617	rab12	100	86.585	ENSAMXG00000004882	rab12	100	87.398	Astyanax_mexicanus
ENSXMAG00000023617	rab12	93	82.018	ENSBTAG00000010356	RAB12	100	82.591	Bos_taurus
ENSXMAG00000023617	rab12	93	82.456	ENSCJAG00000015468	RAB12	72	82.591	Callithrix_jacchus
ENSXMAG00000023617	rab12	93	82.018	ENSCAFG00020023721	RAB12	84	82.591	Canis_lupus_dingo
ENSXMAG00000023617	rab12	93	82.018	ENSCHIG00000016103	RAB12	100	82.591	Capra_hircus
ENSXMAG00000023617	rab12	85	83.810	ENSCPOG00000022689	RAB12	100	88.095	Cavia_porcellus
ENSXMAG00000023617	rab12	100	78.947	ENSCCAG00000022862	RAB12	100	82.591	Cebus_capucinus
ENSXMAG00000023617	rab12	91	83.036	ENSCATG00000037784	RAB12	93	86.222	Cercocebus_atys
ENSXMAG00000023617	rab12	84	87.317	ENSCSAG00000017569	RAB12	72	82.258	Chlorocebus_sabaeus
ENSXMAG00000023617	rab12	93	80.870	ENSCPBG00000028375	RAB12	92	85.398	Chrysemys_picta_bellii
ENSXMAG00000023617	rab12	89	83.105	ENSCANG00000031453	RAB12	99	86.758	Colobus_angolensis_palliatus
ENSXMAG00000023617	rab12	93	83.333	ENSCGRG00001006958	Rab12	83	82.186	Cricetulus_griseus_chok1gshd
ENSXMAG00000023617	rab12	100	95.082	ENSCSEG00000016933	rab12	100	94.672	Cynoglossus_semilaevis
ENSXMAG00000023617	rab12	100	95.528	ENSCVAG00000003539	rab12	100	95.528	Cyprinodon_variegatus
ENSXMAG00000023617	rab12	100	85.246	ENSDARG00000089428	rab12	95	90.135	Danio_rerio
ENSXMAG00000023617	rab12	84	86.829	ENSDNOG00000046064	RAB12	52	85.778	Dasypus_novemcinctus
ENSXMAG00000023617	rab12	91	83.036	ENSDORG00000008920	Rab12	99	85.841	Dipodomys_ordii
ENSXMAG00000023617	rab12	75	66.484	ENSEBUG00000006581	rab12	92	64.062	Eptatretus_burgeri
ENSXMAG00000023617	rab12	93	82.018	ENSEASG00005002926	RAB12	83	81.781	Equus_asinus_asinus
ENSXMAG00000023617	rab12	93	82.018	ENSECAG00000007384	RAB12	71	81.781	Equus_caballus
ENSXMAG00000023617	rab12	100	88.934	ENSELUG00000007123	rab12	100	88.115	Esox_lucius
ENSXMAG00000023617	rab12	93	82.018	ENSFCAG00000027710	RAB12	72	82.591	Felis_catus
ENSXMAG00000023617	rab12	100	93.061	ENSFHEG00000004319	rab12	100	94.286	Fundulus_heteroclitus
ENSXMAG00000023617	rab12	86	89.524	ENSGMOG00000012335	rab12	87	89.048	Gadus_morhua
ENSXMAG00000023617	rab12	92	82.018	ENSGALG00000033608	RAB12	90	85.841	Gallus_gallus
ENSXMAG00000023617	rab12	90	89.954	ENSGACG00000016639	rab12	100	89.498	Gasterosteus_aculeatus
ENSXMAG00000023617	rab12	93	80.702	ENSGAGG00000007278	RAB12	92	85.398	Gopherus_agassizii
ENSXMAG00000023617	rab12	100	95.902	ENSHBUG00000008497	rab12	100	95.902	Haplochromis_burtoni
ENSXMAG00000023617	rab12	96	78.903	ENSHGLG00000006189	RAB12	86	86.878	Heterocephalus_glaber_female
ENSXMAG00000023617	rab12	100	90.204	ENSHCOG00000012376	rab12	100	88.525	Hippocampus_comes
ENSXMAG00000023617	rab12	100	86.475	ENSIPUG00000017401	rab12	100	86.475	Ictalurus_punctatus
ENSXMAG00000023617	rab12	93	80.000	ENSSTOG00000025122	RAB12	96	86.301	Ictidomys_tridecemlineatus
ENSXMAG00000023617	rab12	91	83.036	ENSJJAG00000019064	Rab12	99	86.222	Jaculus_jaculus
ENSXMAG00000023617	rab12	100	90.164	ENSKMAG00000020056	rab12	100	89.344	Kryptolebias_marmoratus
ENSXMAG00000023617	rab12	100	94.672	ENSLBEG00000013756	rab12	100	94.262	Labrus_bergylta
ENSXMAG00000023617	rab12	90	85.650	ENSLACG00000010461	RAB12	91	84.956	Latimeria_chalumnae
ENSXMAG00000023617	rab12	100	83.871	ENSLOCG00000002680	rab12	100	85.887	Lepisosteus_oculatus
ENSXMAG00000023617	rab12	100	78.049	ENSMFAG00000043551	RAB12	100	81.301	Macaca_fascicularis
ENSXMAG00000023617	rab12	84	87.317	ENSMNEG00000040853	RAB12	89	86.222	Macaca_nemestrina
ENSXMAG00000023617	rab12	100	94.262	ENSMAMG00000006862	rab12	100	93.852	Mastacembelus_armatus
ENSXMAG00000023617	rab12	100	95.902	ENSMZEG00005024316	rab12	100	95.902	Maylandia_zebra
ENSXMAG00000023617	rab12	83	83.333	ENSMGAG00000009197	RAB12	100	87.255	Meleagris_gallopavo
ENSXMAG00000023617	rab12	93	83.333	ENSMAUG00000008371	Rab12	83	82.186	Mesocricetus_auratus
ENSXMAG00000023617	rab12	91	82.589	ENSMICG00000030661	RAB12	94	85.778	Microcebus_murinus
ENSXMAG00000023617	rab12	89	83.562	ENSMOCG00000000452	Rab12	100	87.215	Microtus_ochrogaster
ENSXMAG00000023617	rab12	85	86.603	ENSMODG00000021452	RAB12	67	86.667	Monodelphis_domestica
ENSXMAG00000023617	rab12	100	91.803	ENSMALG00000015762	rab12	100	91.393	Monopterus_albus
ENSXMAG00000023617	rab12	93	83.772	MGP_CAROLIEiJ_G0021839	Rab12	84	82.186	Mus_caroli
ENSXMAG00000023617	rab12	93	83.772	ENSMUSG00000023460	Rab12	100	82.186	Mus_musculus
ENSXMAG00000023617	rab12	93	83.772	MGP_PahariEiJ_G0020826	Rab12	100	82.186	Mus_pahari
ENSXMAG00000023617	rab12	93	83.772	MGP_SPRETEiJ_G0022750	Rab12	83	82.186	Mus_spretus
ENSXMAG00000023617	rab12	100	78.543	ENSMLUG00000002883	RAB12	100	81.781	Myotis_lucifugus
ENSXMAG00000023617	rab12	91	75.000	ENSNGAG00000019722	-	92	74.667	Nannospalax_galili
ENSXMAG00000023617	rab12	94	79.828	ENSNGAG00000024103	-	96	85.333	Nannospalax_galili
ENSXMAG00000023617	rab12	100	95.902	ENSNBRG00000014428	rab12	100	95.902	Neolamprologus_brichardi
ENSXMAG00000023617	rab12	100	78.543	ENSNLEG00000006939	RAB12	100	82.591	Nomascus_leucogenys
ENSXMAG00000023617	rab12	100	79.435	ENSMEUG00000000493	RAB12	91	86.667	Notamacropus_eugenii
ENSXMAG00000023617	rab12	89	84.018	ENSODEG00000006414	RAB12	100	87.671	Octodon_degus
ENSXMAG00000023617	rab12	100	95.082	ENSONIG00000018469	rab12	100	94.672	Oreochromis_niloticus
ENSXMAG00000023617	rab12	100	93.443	ENSORLG00000003902	rab12	100	93.033	Oryzias_latipes
ENSXMAG00000023617	rab12	100	93.033	ENSORLG00020005131	rab12	100	92.623	Oryzias_latipes_hni
ENSXMAG00000023617	rab12	100	93.443	ENSORLG00015007869	rab12	100	93.033	Oryzias_latipes_hsok
ENSXMAG00000023617	rab12	100	95.492	ENSOMEG00000008191	rab12	100	95.492	Oryzias_melastigma
ENSXMAG00000023617	rab12	85	83.333	ENSOGAG00000028002	RAB12	99	87.143	Otolemur_garnettii
ENSXMAG00000023617	rab12	78	87.435	ENSOARG00000000728	RAB12	88	85.581	Ovis_aries
ENSXMAG00000023617	rab12	84	83.092	ENSPPAG00000009152	RAB12	97	87.379	Pan_paniscus
ENSXMAG00000023617	rab12	100	78.543	ENSPPRG00000024521	RAB12	100	82.591	Panthera_pardus
ENSXMAG00000023617	rab12	100	78.543	ENSPTRG00000009853	RAB12	100	82.591	Pan_troglodytes
ENSXMAG00000023617	rab12	100	79.757	ENSPANG00000009320	RAB12	100	82.996	Papio_anubis
ENSXMAG00000023617	rab12	100	86.531	ENSPKIG00000008579	rab12	100	86.531	Paramormyrops_kingsleyae
ENSXMAG00000023617	rab12	100	90.164	ENSPMGG00000001890	rab12	100	90.164	Periophthalmus_magnuspinnatus
ENSXMAG00000023617	rab12	93	82.895	ENSPEMG00000021032	Rab12	84	81.781	Peromyscus_maniculatus_bairdii
ENSXMAG00000023617	rab12	88	85.714	ENSPCIG00000010453	RAB12	56	86.667	Phascolarctos_cinereus
ENSXMAG00000023617	rab12	100	97.951	ENSPFOG00000001579	rab12	100	97.951	Poecilia_formosa
ENSXMAG00000023617	rab12	100	97.951	ENSPLAG00000013594	rab12	100	97.951	Poecilia_latipinna
ENSXMAG00000023617	rab12	100	97.951	ENSPMEG00000010417	rab12	100	97.951	Poecilia_mexicana
ENSXMAG00000023617	rab12	100	98.361	ENSPREG00000017487	rab12	100	98.361	Poecilia_reticulata
ENSXMAG00000023617	rab12	93	82.018	ENSPPYG00000009015	-	72	82.591	Pongo_abelii
ENSXMAG00000023617	rab12	100	78.543	ENSPCAG00000015007	RAB12	100	82.186	Procavia_capensis
ENSXMAG00000023617	rab12	100	78.543	ENSPCOG00000019816	RAB12	100	82.591	Propithecus_coquereli
ENSXMAG00000023617	rab12	100	78.947	ENSPVAG00000002757	RAB12	100	82.996	Pteropus_vampyrus
ENSXMAG00000023617	rab12	100	95.902	ENSPNYG00000005654	rab12	100	95.902	Pundamilia_nyererei
ENSXMAG00000023617	rab12	100	95.902	ENSPNYG00000023905	rab12	100	95.902	Pundamilia_nyererei
ENSXMAG00000023617	rab12	100	86.585	ENSPNAG00000015031	rab12	100	87.398	Pygocentrus_nattereri
ENSXMAG00000023617	rab12	93	81.659	ENSRNOG00000019295	Rab12	91	80.786	Rattus_norvegicus
ENSXMAG00000023617	rab12	91	83.036	ENSRBIG00000028760	RAB12	97	86.222	Rhinopithecus_bieti
ENSXMAG00000023617	rab12	91	83.036	ENSRROG00000019249	RAB12	94	86.222	Rhinopithecus_roxellana
ENSXMAG00000023617	rab12	94	78.355	ENSSBOG00000021125	RAB12	80	87.081	Saimiri_boliviensis_boliviensis
ENSXMAG00000023617	rab12	93	82.456	ENSSHAG00000001489	RAB12	91	86.829	Sarcophilus_harrisii
ENSXMAG00000023617	rab12	100	93.033	ENSSMAG00000012678	rab12	100	92.623	Scophthalmus_maximus
ENSXMAG00000023617	rab12	100	95.492	ENSSDUG00000008505	rab12	100	95.492	Seriola_dumerili
ENSXMAG00000023617	rab12	100	95.492	ENSSLDG00000022239	rab12	100	95.492	Seriola_lalandi_dorsalis
ENSXMAG00000023617	rab12	90	83.857	ENSSPUG00000003222	RAB12	92	86.726	Sphenodon_punctatus
ENSXMAG00000023617	rab12	100	95.082	ENSSPAG00000010822	rab12	100	94.672	Stegastes_partitus
ENSXMAG00000023617	rab12	93	82.456	ENSSSCG00000038026	RAB12	100	83.401	Sus_scrofa
ENSXMAG00000023617	rab12	93	80.519	ENSTGUG00000009889	RAB12	100	81.600	Taeniopygia_guttata
ENSXMAG00000023617	rab12	100	90.574	ENSTRUG00000024455	rab12	100	89.754	Takifugu_rubripes
ENSXMAG00000023617	rab12	100	92.213	ENSTNIG00000014859	rab12	100	91.393	Tetraodon_nigroviridis
ENSXMAG00000023617	rab12	89	83.105	ENSTTRG00000008711	RAB12	99	86.758	Tursiops_truncatus
ENSXMAG00000023617	rab12	100	78.543	ENSUAMG00000018092	RAB12	100	82.591	Ursus_americanus
ENSXMAG00000023617	rab12	90	82.353	ENSVVUG00000011748	RAB12	99	85.973	Vulpes_vulpes
ENSXMAG00000023617	rab12	95	82.128	ENSXETG00000004289	rab12	79	81.855	Xenopus_tropicalis
ENSXMAG00000023617	rab12	100	99.590	ENSXCOG00000019310	rab12	100	99.590	Xiphophorus_couchianus