EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000023662 (Gene tree)
Gene ID: 102222867
Gene Symbol: rbm38
Alias: fi25e12|rnpc1|wu:fi25e12|zgc:92336
Full Name: RNA-binding protein 38-like
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 24478 bases
Position: chr1:22163159-22187636
Accession: 102222867
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000036204	RRM_1	PF00076.22	4.3e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000033711	-	1151	XM_005801792	ENSXMAP00000036204	250 (aa)	XP_005801849	M4ASQ6

Gene Model

Click here to download ENSXMAG00000023662's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000023662's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000023662	rbm38	91	58.369	ENSG00000132819	RBM38	91	83.929	Homo_sapiens
ENSXMAG00000023662	rbm38	100	90.800	ENSAPOG00000003301	rbm38	100	90.800	Acanthochromis_polyacanthus
ENSXMAG00000023662	rbm38	98	61.905	ENSAPOG00000009939	-	100	61.753	Acanthochromis_polyacanthus
ENSXMAG00000023662	rbm38	100	87.200	ENSACIG00000000010	rbm38	100	87.200	Amphilophus_citrinellus
ENSXMAG00000023662	rbm38	98	62.550	ENSACIG00000012502	-	100	81.197	Amphilophus_citrinellus
ENSXMAG00000023662	rbm38	95	62.083	ENSAOCG00000012559	RBM38	86	66.995	Amphiprion_ocellaris
ENSXMAG00000023662	rbm38	100	91.200	ENSAOCG00000013497	-	100	91.200	Amphiprion_ocellaris
ENSXMAG00000023662	rbm38	100	91.200	ENSAPEG00000013137	rbm38	100	91.200	Amphiprion_percula
ENSXMAG00000023662	rbm38	98	61.111	ENSAPEG00000023581	-	100	60.558	Amphiprion_percula
ENSXMAG00000023662	rbm38	100	85.600	ENSATEG00000016366	rbm38	100	85.600	Anabas_testudineus
ENSXMAG00000023662	rbm38	98	62.302	ENSATEG00000016710	-	100	60.558	Anabas_testudineus
ENSXMAG00000023662	rbm38	91	57.082	ENSACAG00000016238	RBM38	88	56.466	Anolis_carolinensis
ENSXMAG00000023662	rbm38	91	57.940	ENSANAG00000031959	RBM38	77	91.398	Aotus_nancymaae
ENSXMAG00000023662	rbm38	98	62.205	ENSACLG00000019514	-	100	58.964	Astatotilapia_calliptera
ENSXMAG00000023662	rbm38	95	55.462	ENSAMXG00000038120	rbm38	79	62.234	Astyanax_mexicanus
ENSXMAG00000023662	rbm38	98	59.200	ENSAMXG00000015601	-	100	58.800	Astyanax_mexicanus
ENSXMAG00000023662	rbm38	91	59.227	ENSBTAG00000008105	RBM38	89	58.475	Bos_taurus
ENSXMAG00000023662	rbm38	60	59.603	WBGene00006321	sup-12	78	69.492	Caenorhabditis_elegans
ENSXMAG00000023662	rbm38	91	57.940	ENSCJAG00000019139	RBM38	77	91.398	Callithrix_jacchus
ENSXMAG00000023662	rbm38	91	57.940	ENSCAFG00020021943	RBM38	89	57.940	Canis_lupus_dingo
ENSXMAG00000023662	rbm38	91	58.798	ENSCHIG00000002609	RBM38	89	57.940	Capra_hircus
ENSXMAG00000023662	rbm38	91	58.798	ENSCPOG00000012781	RBM38	89	58.798	Cavia_porcellus
ENSXMAG00000023662	rbm38	91	57.940	ENSCCAG00000036872	RBM38	77	91.398	Cebus_capucinus
ENSXMAG00000023662	rbm38	91	58.798	ENSCATG00000032133	RBM38	77	91.398	Cercocebus_atys
ENSXMAG00000023662	rbm38	91	59.227	ENSCLAG00000005906	RBM38	78	67.760	Chinchilla_lanigera
ENSXMAG00000023662	rbm38	91	58.798	ENSCSAG00000015503	RBM38	89	58.369	Chlorocebus_sabaeus
ENSXMAG00000023662	rbm38	92	56.356	ENSCPBG00000024059	RBM38	84	64.706	Chrysemys_picta_bellii
ENSXMAG00000023662	rbm38	61	60.127	ENSCSAVG00000001132	-	58	60.127	Ciona_savignyi
ENSXMAG00000023662	rbm38	91	45.887	ENSCANG00000030105	-	78	45.455	Colobus_angolensis_palliatus
ENSXMAG00000023662	rbm38	72	65.574	ENSCGRG00001012928	Rbm38	89	57.203	Cricetulus_griseus_chok1gshd
ENSXMAG00000023662	rbm38	84	66.507	ENSCSEG00000020943	rbm38	63	69.474	Cynoglossus_semilaevis
ENSXMAG00000023662	rbm38	98	63.745	ENSCSEG00000004701	-	100	62.550	Cynoglossus_semilaevis
ENSXMAG00000023662	rbm38	98	63.347	ENSCVAG00000005472	-	100	62.151	Cyprinodon_variegatus
ENSXMAG00000023662	rbm38	100	94.800	ENSCVAG00000015952	rbm38	100	94.800	Cyprinodon_variegatus
ENSXMAG00000023662	rbm38	98	63.563	ENSDARG00000058818	rbm38	83	69.652	Danio_rerio
ENSXMAG00000023662	rbm38	91	56.710	ENSDNOG00000032004	RBM38	98	56.277	Dasypus_novemcinctus
ENSXMAG00000023662	rbm38	91	57.940	ENSECAG00000007700	RBM38	89	57.940	Equus_caballus
ENSXMAG00000023662	rbm38	91	56.838	ENSEEUG00000013489	RBM38	89	56.410	Erinaceus_europaeus
ENSXMAG00000023662	rbm38	98	60.000	ENSELUG00000005849	-	100	58.824	Esox_lucius
ENSXMAG00000023662	rbm38	92	69.130	ENSELUG00000000585	-	100	68.261	Esox_lucius
ENSXMAG00000023662	rbm38	91	58.369	ENSFCAG00000042916	RBM38	77	90.323	Felis_catus
ENSXMAG00000023662	rbm38	68	69.143	ENSFALG00000010805	RBM38	88	68.391	Ficedula_albicollis
ENSXMAG00000023662	rbm38	100	95.618	ENSFHEG00000017748	rbm38	100	95.618	Fundulus_heteroclitus
ENSXMAG00000023662	rbm38	98	60.558	ENSFHEG00000006160	-	100	60.558	Fundulus_heteroclitus
ENSXMAG00000023662	rbm38	75	65.445	ENSGMOG00000016655	-	100	68.586	Gadus_morhua
ENSXMAG00000023662	rbm38	92	56.170	ENSGALG00000026081	RBM38	84	63.441	Gallus_gallus
ENSXMAG00000023662	rbm38	93	75.536	ENSGACG00000015224	rbm38	100	75.536	Gasterosteus_aculeatus
ENSXMAG00000023662	rbm38	93	59.072	ENSGACG00000009873	-	100	58.228	Gasterosteus_aculeatus
ENSXMAG00000023662	rbm38	92	56.356	ENSGAGG00000001187	RBM38	84	64.706	Gopherus_agassizii
ENSXMAG00000023662	rbm38	100	87.600	ENSHBUG00000012058	rbm38	100	87.600	Haplochromis_burtoni
ENSXMAG00000023662	rbm38	98	62.205	ENSHBUG00000011778	-	100	58.964	Haplochromis_burtoni
ENSXMAG00000023662	rbm38	91	59.657	ENSHGLG00000015077	RBM38	89	58.369	Heterocephalus_glaber_female
ENSXMAG00000023662	rbm38	81	65.196	ENSHCOG00000005622	-	57	66.667	Hippocampus_comes
ENSXMAG00000023662	rbm38	100	61.355	ENSHCOG00000019040	rbm38	100	61.355	Hippocampus_comes
ENSXMAG00000023662	rbm38	98	58.000	ENSIPUG00000019349	-	100	57.600	Ictalurus_punctatus
ENSXMAG00000023662	rbm38	91	74.894	ENSKMAG00000012402	rbm38	99	74.894	Kryptolebias_marmoratus
ENSXMAG00000023662	rbm38	100	85.600	ENSLBEG00000018878	rbm38	100	85.600	Labrus_bergylta
ENSXMAG00000023662	rbm38	98	61.868	ENSLBEG00000016163	RBM38	100	59.761	Labrus_bergylta
ENSXMAG00000023662	rbm38	98	62.097	ENSLOCG00000003456	rbm38	100	58.065	Lepisosteus_oculatus
ENSXMAG00000023662	rbm38	91	58.798	ENSMFAG00000043808	RBM38	77	91.398	Macaca_fascicularis
ENSXMAG00000023662	rbm38	91	58.798	ENSMMUG00000031391	RBM38	77	91.398	Macaca_mulatta
ENSXMAG00000023662	rbm38	91	58.798	ENSMNEG00000034683	RBM38	77	91.398	Macaca_nemestrina
ENSXMAG00000023662	rbm38	98	63.745	ENSMAMG00000020499	RBM38	100	62.000	Mastacembelus_armatus
ENSXMAG00000023662	rbm38	100	88.400	ENSMAMG00000024135	rbm38	100	88.400	Mastacembelus_armatus
ENSXMAG00000023662	rbm38	98	62.205	ENSMZEG00005000849	-	100	58.964	Maylandia_zebra
ENSXMAG00000023662	rbm38	100	87.600	ENSMZEG00005026036	rbm38	100	87.600	Maylandia_zebra
ENSXMAG00000023662	rbm38	72	66.120	ENSMAUG00000021211	Rbm38	89	58.051	Mesocricetus_auratus
ENSXMAG00000023662	rbm38	91	57.511	ENSMICG00000038011	RBM38	98	57.627	Microcebus_murinus
ENSXMAG00000023662	rbm38	72	66.120	ENSMOCG00000008715	Rbm38	89	57.940	Microtus_ochrogaster
ENSXMAG00000023662	rbm38	98	61.111	ENSMMOG00000020051	-	100	60.159	Mola_mola
ENSXMAG00000023662	rbm38	92	55.745	ENSMODG00000016458	RBM38	91	55.745	Monodelphis_domestica
ENSXMAG00000023662	rbm38	75	70.526	ENSMALG00000004680	RBM38	71	70.526	Monopterus_albus
ENSXMAG00000023662	rbm38	100	70.800	ENSMALG00000022327	rbm38	100	72.000	Monopterus_albus
ENSXMAG00000023662	rbm38	91	58.369	MGP_CAROLIEiJ_G0024745	Rbm38	89	57.627	Mus_caroli
ENSXMAG00000023662	rbm38	91	58.369	ENSMUSG00000027510	Rbm38	89	57.627	Mus_musculus
ENSXMAG00000023662	rbm38	91	57.511	MGP_PahariEiJ_G0026186	Rbm38	89	57.511	Mus_pahari
ENSXMAG00000023662	rbm38	91	58.369	MGP_SPRETEiJ_G0025665	Rbm38	89	57.627	Mus_spretus
ENSXMAG00000023662	rbm38	72	65.574	ENSMPUG00000006518	RBM38	89	65.574	Mustela_putorius_furo
ENSXMAG00000023662	rbm38	91	57.940	ENSMLUG00000011140	RBM38	98	56.652	Myotis_lucifugus
ENSXMAG00000023662	rbm38	98	62.205	ENSNBRG00000022545	-	100	59.684	Neolamprologus_brichardi
ENSXMAG00000023662	rbm38	100	88.000	ENSNBRG00000022685	rbm38	100	88.000	Neolamprologus_brichardi
ENSXMAG00000023662	rbm38	91	60.086	ENSODEG00000007980	RBM38	89	59.916	Octodon_degus
ENSXMAG00000023662	rbm38	98	62.055	ENSONIG00000020324	-	100	59.524	Oreochromis_niloticus
ENSXMAG00000023662	rbm38	98	87.755	ENSONIG00000017073	rbm38	100	87.755	Oreochromis_niloticus
ENSXMAG00000023662	rbm38	78	61.421	ENSOANG00000009259	RBM38	69	64.130	Ornithorhynchus_anatinus
ENSXMAG00000023662	rbm38	100	84.064	ENSORLG00000012154	rbm38	100	80.876	Oryzias_latipes
ENSXMAG00000023662	rbm38	98	59.449	ENSORLG00000027180	-	100	58.964	Oryzias_latipes
ENSXMAG00000023662	rbm38	100	58.915	ENSORLG00020020751	-	100	58.964	Oryzias_latipes_hni
ENSXMAG00000023662	rbm38	100	84.861	ENSORLG00020017871	rbm38	100	80.876	Oryzias_latipes_hni
ENSXMAG00000023662	rbm38	100	84.861	ENSORLG00015012606	rbm38	100	80.876	Oryzias_latipes_hsok
ENSXMAG00000023662	rbm38	98	60.956	ENSORLG00015017040	-	100	61.265	Oryzias_latipes_hsok
ENSXMAG00000023662	rbm38	98	60.317	ENSOMEG00000023912	-	100	60.079	Oryzias_melastigma
ENSXMAG00000023662	rbm38	100	84.861	ENSOMEG00000006805	rbm38	100	80.876	Oryzias_melastigma
ENSXMAG00000023662	rbm38	91	58.798	ENSOGAG00000029136	RBM38	88	58.051	Otolemur_garnettii
ENSXMAG00000023662	rbm38	91	58.369	ENSPPRG00000009507	RBM38	77	90.323	Panthera_pardus
ENSXMAG00000023662	rbm38	77	63.590	ENSPTRG00000013661	RBM38	77	91.398	Pan_troglodytes
ENSXMAG00000023662	rbm38	95	47.131	ENSPANG00000033127	-	93	46.721	Papio_anubis
ENSXMAG00000023662	rbm38	91	58.798	ENSPANG00000020919	-	77	91.398	Papio_anubis
ENSXMAG00000023662	rbm38	98	56.917	ENSPKIG00000025417	rbm38	83	64.390	Paramormyrops_kingsleyae
ENSXMAG00000023662	rbm38	98	56.400	ENSPKIG00000018122	-	95	81.982	Paramormyrops_kingsleyae
ENSXMAG00000023662	rbm38	92	55.508	ENSPSIG00000011649	RBM38	77	62.903	Pelodiscus_sinensis
ENSXMAG00000023662	rbm38	100	73.307	ENSPMGG00000011343	rbm38	100	76.096	Periophthalmus_magnuspinnatus
ENSXMAG00000023662	rbm38	98	59.055	ENSPMGG00000017094	-	100	57.540	Periophthalmus_magnuspinnatus
ENSXMAG00000023662	rbm38	92	56.170	ENSPCIG00000013648	RBM38	91	56.170	Phascolarctos_cinereus
ENSXMAG00000023662	rbm38	100	97.638	ENSPFOG00000011658	rbm38	100	97.638	Poecilia_formosa
ENSXMAG00000023662	rbm38	100	97.244	ENSPLAG00000005218	rbm38	100	97.244	Poecilia_latipinna
ENSXMAG00000023662	rbm38	98	61.719	ENSPLAG00000002500	-	100	62.948	Poecilia_latipinna
ENSXMAG00000023662	rbm38	100	97.244	ENSPMEG00000015770	rbm38	100	97.244	Poecilia_mexicana
ENSXMAG00000023662	rbm38	100	97.244	ENSPREG00000007398	rbm38	100	97.244	Poecilia_reticulata
ENSXMAG00000023662	rbm38	91	57.940	ENSPCOG00000026201	RBM38	76	91.398	Propithecus_coquereli
ENSXMAG00000023662	rbm38	72	40.437	ENSPVAG00000006457	RBM38	89	36.910	Pteropus_vampyrus
ENSXMAG00000023662	rbm38	100	87.200	ENSPNYG00000021373	rbm38	100	87.200	Pundamilia_nyererei
ENSXMAG00000023662	rbm38	98	62.205	ENSPNYG00000019727	-	100	81.197	Pundamilia_nyererei
ENSXMAG00000023662	rbm38	98	60.400	ENSPNAG00000015123	-	88	82.456	Pygocentrus_nattereri
ENSXMAG00000023662	rbm38	94	59.751	ENSPNAG00000010596	rbm38	98	59.072	Pygocentrus_nattereri
ENSXMAG00000023662	rbm38	91	59.227	ENSRNOG00000006420	Rbm38	89	58.051	Rattus_norvegicus
ENSXMAG00000023662	rbm38	92	52.155	ENSRROG00000036388	-	88	51.724	Rhinopithecus_roxellana
ENSXMAG00000023662	rbm38	91	57.082	ENSSBOG00000031053	RBM38	87	91.398	Saimiri_boliviensis_boliviensis
ENSXMAG00000023662	rbm38	98	56.000	ENSSFOG00015004453	rbm38	100	55.731	Scleropages_formosus
ENSXMAG00000023662	rbm38	100	88.400	ENSSDUG00000022611	rbm38	100	88.400	Seriola_dumerili
ENSXMAG00000023662	rbm38	98	61.905	ENSSDUG00000021082	RBM38	100	60.956	Seriola_dumerili
ENSXMAG00000023662	rbm38	100	88.400	ENSSLDG00000010845	rbm38	100	88.400	Seriola_lalandi_dorsalis
ENSXMAG00000023662	rbm38	98	61.905	ENSSLDG00000011778	RBM38	100	60.956	Seriola_lalandi_dorsalis
ENSXMAG00000023662	rbm38	100	91.200	ENSSPAG00000011113	rbm38	100	91.200	Stegastes_partitus
ENSXMAG00000023662	rbm38	98	62.302	ENSSPAG00000020989	RBM38	100	61.355	Stegastes_partitus
ENSXMAG00000023662	rbm38	91	57.940	ENSSSCG00000007504	RBM38	89	57.940	Sus_scrofa
ENSXMAG00000023662	rbm38	100	80.000	ENSTRUG00000024954	rbm38	100	76.400	Takifugu_rubripes
ENSXMAG00000023662	rbm38	98	60.956	ENSTRUG00000019869	-	100	60.956	Takifugu_rubripes
ENSXMAG00000023662	rbm38	94	61.765	ENSTNIG00000007093	-	100	59.664	Tetraodon_nigroviridis
ENSXMAG00000023662	rbm38	74	64.362	ENSUAMG00000019780	RBM38	89	57.511	Ursus_americanus
ENSXMAG00000023662	rbm38	91	57.940	ENSVVUG00000017246	RBM38	89	57.940	Vulpes_vulpes
ENSXMAG00000023662	rbm38	76	62.694	ENSXETG00000011268	rbm38	98	55.882	Xenopus_tropicalis
ENSXMAG00000023662	rbm38	83	54.260	ENSXCOG00000017324	-	62	75.000	Xiphophorus_couchianus