EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000023729 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 4374 bases
Position: chr5:17775260-17779633
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000031702	MMR_HSR1	PF01926.23	4.1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000042199	-	1622	-	ENSXMAP00000031702	240 (aa)	-	-

Gene Model

Click here to download ENSXMAG00000023729's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000023729's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000023729	-	92	54.751	ENSG00000172007	RAB33B	86	55.000	Homo_sapiens
ENSXMAG00000023729	-	91	56.621	ENSAPOG00000019727	rab33ba	79	58.738	Acanthochromis_polyacanthus
ENSXMAG00000023729	-	93	74.107	ENSAPOG00000005341	-	92	74.439	Acanthochromis_polyacanthus
ENSXMAG00000023729	-	93	54.505	ENSAMEG00000010983	RAB33B	81	54.751	Ailuropoda_melanoleuca
ENSXMAG00000023729	-	100	73.029	ENSACIG00000013119	-	99	73.611	Amphilophus_citrinellus
ENSXMAG00000023729	-	99	53.498	ENSACIG00000021855	rab33ba	90	53.982	Amphilophus_citrinellus
ENSXMAG00000023729	-	93	74.554	ENSAOCG00000005301	-	92	74.888	Amphiprion_ocellaris
ENSXMAG00000023729	-	92	53.982	ENSAOCG00000005790	rab33ba	88	53.982	Amphiprion_ocellaris
ENSXMAG00000023729	-	83	58.500	ENSAPEG00000005001	rab33ba	88	53.540	Amphiprion_percula
ENSXMAG00000023729	-	63	83.333	ENSAPEG00000015430	-	80	88.172	Amphiprion_percula
ENSXMAG00000023729	-	90	57.143	ENSATEG00000016312	rab33ba	79	58.000	Anabas_testudineus
ENSXMAG00000023729	-	92	73.543	ENSATEG00000022993	-	92	73.543	Anabas_testudineus
ENSXMAG00000023729	-	99	52.282	ENSACAG00000002227	RAB33B	88	53.636	Anolis_carolinensis
ENSXMAG00000023729	-	93	54.505	ENSANAG00000027700	RAB33B	86	54.751	Aotus_nancymaae
ENSXMAG00000023729	-	100	76.763	ENSACLG00000010965	-	92	76.126	Astatotilapia_calliptera
ENSXMAG00000023729	-	92	54.425	ENSACLG00000005720	rab33ba	90	54.425	Astatotilapia_calliptera
ENSXMAG00000023729	-	83	60.302	ENSAMXG00000040286	rab33ba	79	60.302	Astyanax_mexicanus
ENSXMAG00000023729	-	91	52.466	ENSAMXG00000037428	-	95	51.835	Astyanax_mexicanus
ENSXMAG00000023729	-	92	54.299	ENSBTAG00000003208	RAB33B	86	54.545	Bos_taurus
ENSXMAG00000023729	-	93	54.505	ENSCJAG00000040200	RAB33B	86	54.751	Callithrix_jacchus
ENSXMAG00000023729	-	92	54.751	ENSCAFG00020020861	RAB33B	86	55.000	Canis_lupus_dingo
ENSXMAG00000023729	-	92	54.751	ENSCHIG00000020393	RAB33B	86	55.000	Capra_hircus
ENSXMAG00000023729	-	92	54.751	ENSTSYG00000033032	RAB33B	86	55.000	Carlito_syrichta
ENSXMAG00000023729	-	84	57.711	ENSCPOG00000030742	RAB33B	79	58.000	Cavia_porcellus
ENSXMAG00000023729	-	93	54.505	ENSCCAG00000019859	RAB33B	86	54.751	Cebus_capucinus
ENSXMAG00000023729	-	93	54.505	ENSCATG00000007092	RAB33B	86	54.751	Cercocebus_atys
ENSXMAG00000023729	-	93	55.459	ENSCLAG00000003133	RAB33B	81	57.843	Chinchilla_lanigera
ENSXMAG00000023729	-	93	54.505	ENSCSAG00000003531	RAB33B	86	54.751	Chlorocebus_sabaeus
ENSXMAG00000023729	-	89	54.206	ENSCHOG00000009633	RAB33B	99	54.206	Choloepus_hoffmanni
ENSXMAG00000023729	-	99	53.750	ENSCPBG00000027605	RAB33B	88	55.000	Chrysemys_picta_bellii
ENSXMAG00000023729	-	93	54.505	ENSCANG00000034858	RAB33B	86	54.751	Colobus_angolensis_palliatus
ENSXMAG00000023729	-	84	57.711	ENSCGRG00001016897	Rab33b	79	58.000	Cricetulus_griseus_chok1gshd
ENSXMAG00000023729	-	84	57.711	ENSCGRG00000015464	Rab33b	79	58.000	Cricetulus_griseus_crigri
ENSXMAG00000023729	-	100	68.313	ENSCSEG00000014479	-	92	69.058	Cynoglossus_semilaevis
ENSXMAG00000023729	-	90	54.378	ENSCSEG00000020348	rab33ba	79	55.500	Cynoglossus_semilaevis
ENSXMAG00000023729	-	100	86.307	ENSCVAG00000000862	-	92	86.036	Cyprinodon_variegatus
ENSXMAG00000023729	-	92	55.157	ENSDARG00000052290	rab33ba	89	55.157	Danio_rerio
ENSXMAG00000023729	-	95	53.913	ENSDNOG00000005253	RAB33B	81	54.545	Dasypus_novemcinctus
ENSXMAG00000023729	-	92	54.299	ENSDORG00000023618	Rab33b	86	54.545	Dipodomys_ordii
ENSXMAG00000023729	-	92	54.299	ENSETEG00000003629	RAB33B	86	54.545	Echinops_telfairi
ENSXMAG00000023729	-	92	54.751	ENSEASG00005007864	RAB33B	86	55.000	Equus_asinus_asinus
ENSXMAG00000023729	-	92	54.751	ENSECAG00000019611	RAB33B	86	55.000	Equus_caballus
ENSXMAG00000023729	-	99	58.301	ENSELUG00000011352	-	92	58.333	Esox_lucius
ENSXMAG00000023729	-	99	53.036	ENSELUG00000002575	rab33ba	90	54.185	Esox_lucius
ENSXMAG00000023729	-	100	52.263	ENSFALG00000004886	RAB33B	87	54.299	Ficedula_albicollis
ENSXMAG00000023729	-	91	56.000	ENSFDAG00000016833	RAB33B	79	57.500	Fukomys_damarensis
ENSXMAG00000023729	-	91	55.455	ENSFHEG00000006820	rab33ba	79	57.143	Fundulus_heteroclitus
ENSXMAG00000023729	-	93	54.955	ENSGMOG00000000885	rab33ba	90	55.981	Gadus_morhua
ENSXMAG00000023729	-	99	52.675	ENSGALG00000009790	RAB33B	87	54.545	Gallus_gallus
ENSXMAG00000023729	-	92	95.475	ENSGAFG00000015249	-	92	95.475	Gambusia_affinis
ENSXMAG00000023729	-	91	57.339	ENSGAFG00000019659	rab33ba	79	59.204	Gambusia_affinis
ENSXMAG00000023729	-	99	50.840	ENSGACG00000019540	rab33ba	89	52.036	Gasterosteus_aculeatus
ENSXMAG00000023729	-	99	53.750	ENSGAGG00000002936	RAB33B	88	55.000	Gopherus_agassizii
ENSXMAG00000023729	-	92	54.751	ENSGGOG00000040896	RAB33B	86	55.000	Gorilla_gorilla
ENSXMAG00000023729	-	85	57.843	ENSHBUG00000013162	rab33ba	94	57.843	Haplochromis_burtoni
ENSXMAG00000023729	-	100	76.349	ENSHBUG00000001714	-	92	76.577	Haplochromis_burtoni
ENSXMAG00000023729	-	85	56.098	ENSHGLG00000008370	RAB33B	81	56.373	Heterocephalus_glaber_female
ENSXMAG00000023729	-	92	45.852	ENSHGLG00000007292	-	79	46.040	Heterocephalus_glaber_female
ENSXMAG00000023729	-	92	45.852	ENSHGLG00100001635	-	79	46.040	Heterocephalus_glaber_male
ENSXMAG00000023729	-	85	56.098	ENSHGLG00100002929	RAB33B	81	56.373	Heterocephalus_glaber_male
ENSXMAG00000023729	-	100	70.954	ENSHCOG00000012834	-	92	70.136	Hippocampus_comes
ENSXMAG00000023729	-	85	56.796	ENSHCOG00000003569	rab33ba	81	56.796	Hippocampus_comes
ENSXMAG00000023729	-	65	57.419	ENSIPUG00000009784	-	72	54.601	Ictalurus_punctatus
ENSXMAG00000023729	-	92	56.561	ENSIPUG00000017684	rab33b	88	56.561	Ictalurus_punctatus
ENSXMAG00000023729	-	93	54.505	ENSSTOG00000027511	RAB33B	86	55.000	Ictidomys_tridecemlineatus
ENSXMAG00000023729	-	85	57.488	ENSKMAG00000003105	rab33ba	83	57.488	Kryptolebias_marmoratus
ENSXMAG00000023729	-	100	78.008	ENSKMAG00000020034	-	76	77.477	Kryptolebias_marmoratus
ENSXMAG00000023729	-	94	55.752	ENSLBEG00000026777	rab33ba	83	56.938	Labrus_bergylta
ENSXMAG00000023729	-	100	73.444	ENSLBEG00000018063	-	92	73.874	Labrus_bergylta
ENSXMAG00000023729	-	92	54.299	ENSLACG00000013571	RAB33B	87	54.299	Latimeria_chalumnae
ENSXMAG00000023729	-	99	54.812	ENSLOCG00000010535	rab33ba	87	55.455	Lepisosteus_oculatus
ENSXMAG00000023729	-	97	53.419	ENSLAFG00000022351	RAB33B	87	54.955	Loxodonta_africana
ENSXMAG00000023729	-	93	54.505	ENSMFAG00000003290	RAB33B	86	54.751	Macaca_fascicularis
ENSXMAG00000023729	-	93	54.505	ENSMMUG00000020692	RAB33B	86	54.751	Macaca_mulatta
ENSXMAG00000023729	-	92	54.299	ENSMNEG00000024756	RAB33B	86	54.545	Macaca_nemestrina
ENSXMAG00000023729	-	93	54.505	ENSMLEG00000033393	RAB33B	86	54.751	Mandrillus_leucophaeus
ENSXMAG00000023729	-	98	54.545	ENSMAMG00000001098	rab33ba	90	54.867	Mastacembelus_armatus
ENSXMAG00000023729	-	92	73.991	ENSMAMG00000006640	-	92	73.991	Mastacembelus_armatus
ENSXMAG00000023729	-	92	54.425	ENSMZEG00005001477	rab33ba	90	54.425	Maylandia_zebra
ENSXMAG00000023729	-	100	76.349	ENSMZEG00005011586	-	92	75.676	Maylandia_zebra
ENSXMAG00000023729	-	92	54.299	ENSMAUG00000014030	Rab33b	86	54.545	Mesocricetus_auratus
ENSXMAG00000023729	-	92	54.751	ENSMICG00000034809	-	86	55.000	Microcebus_murinus
ENSXMAG00000023729	-	84	57.711	ENSMOCG00000019866	Rab33b	79	58.000	Microtus_ochrogaster
ENSXMAG00000023729	-	86	57.282	ENSMMOG00000017443	rab33ba	90	57.282	Mola_mola
ENSXMAG00000023729	-	92	73.543	ENSMMOG00000006631	-	92	73.543	Mola_mola
ENSXMAG00000023729	-	100	52.893	ENSMODG00000000118	RAB33B	89	53.846	Monodelphis_domestica
ENSXMAG00000023729	-	95	56.710	ENSMALG00000022693	rab33ba	84	57.075	Monopterus_albus
ENSXMAG00000023729	-	99	71.488	ENSMALG00000021944	-	88	81.633	Monopterus_albus
ENSXMAG00000023729	-	82	57.360	MGP_CAROLIEiJ_G0024976	Rab33b	77	57.653	Mus_caroli
ENSXMAG00000023729	-	82	57.360	ENSMUSG00000027739	Rab33b	77	57.653	Mus_musculus
ENSXMAG00000023729	-	82	57.868	MGP_PahariEiJ_G0026417	Rab33b	77	58.163	Mus_pahari
ENSXMAG00000023729	-	82	57.360	MGP_SPRETEiJ_G0025911	Rab33b	77	57.653	Mus_spretus
ENSXMAG00000023729	-	92	54.751	ENSMPUG00000016125	RAB33B	86	55.000	Mustela_putorius_furo
ENSXMAG00000023729	-	99	52.697	ENSMLUG00000006803	RAB33B	81	55.455	Myotis_lucifugus
ENSXMAG00000023729	-	92	53.846	ENSNGAG00000015807	Rab33b	86	54.091	Nannospalax_galili
ENSXMAG00000023729	-	83	59.000	ENSNBRG00000007077	rab33ba	74	59.000	Neolamprologus_brichardi
ENSXMAG00000023729	-	76	83.607	ENSNBRG00000017996	-	71	84.146	Neolamprologus_brichardi
ENSXMAG00000023729	-	92	54.751	ENSNLEG00000032616	RAB33B	86	55.000	Nomascus_leucogenys
ENSXMAG00000023729	-	52	70.968	ENSOPRG00000001073	RAB33B	75	71.545	Ochotona_princeps
ENSXMAG00000023729	-	93	55.895	ENSODEG00000002979	RAB33B	81	57.353	Octodon_degus
ENSXMAG00000023729	-	100	76.446	ENSONIG00000003367	-	100	74.661	Oreochromis_niloticus
ENSXMAG00000023729	-	92	53.982	ENSONIG00000011559	rab33ba	90	53.982	Oreochromis_niloticus
ENSXMAG00000023729	-	83	55.779	ENSOANG00000015286	RAB33B	99	53.052	Ornithorhynchus_anatinus
ENSXMAG00000023729	-	92	54.545	ENSORLG00000030109	rab33ba	82	57.143	Oryzias_latipes
ENSXMAG00000023729	-	92	75.785	ENSORLG00000002071	-	92	75.785	Oryzias_latipes
ENSXMAG00000023729	-	92	55.000	ENSORLG00020018196	rab33ba	82	57.635	Oryzias_latipes_hni
ENSXMAG00000023729	-	92	75.785	ENSORLG00020013870	-	92	75.785	Oryzias_latipes_hni
ENSXMAG00000023729	-	92	55.000	ENSORLG00015012872	rab33ba	81	57.635	Oryzias_latipes_hsok
ENSXMAG00000023729	-	92	75.785	ENSORLG00015013453	-	92	75.785	Oryzias_latipes_hsok
ENSXMAG00000023729	-	92	77.027	ENSOMEG00000021726	-	92	77.027	Oryzias_melastigma
ENSXMAG00000023729	-	91	54.587	ENSOMEG00000019819	rab33ba	79	57.500	Oryzias_melastigma
ENSXMAG00000023729	-	92	54.751	ENSOGAG00000006778	RAB33B	86	55.000	Otolemur_garnettii
ENSXMAG00000023729	-	92	54.751	ENSOARG00000013460	RAB33B	98	55.000	Ovis_aries
ENSXMAG00000023729	-	92	54.751	ENSPPAG00000043376	RAB33B	86	55.000	Pan_paniscus
ENSXMAG00000023729	-	99	53.878	ENSPPRG00000006119	RAB33B	86	55.000	Panthera_pardus
ENSXMAG00000023729	-	99	53.878	ENSPTIG00000007518	RAB33B	86	55.000	Panthera_tigris_altaica
ENSXMAG00000023729	-	92	54.299	ENSPTRG00000016455	RAB33B	86	54.545	Pan_troglodytes
ENSXMAG00000023729	-	93	54.505	ENSPANG00000014740	RAB33B	86	54.751	Papio_anubis
ENSXMAG00000023729	-	91	57.273	ENSPKIG00000013084	rab33ba	80	58.706	Paramormyrops_kingsleyae
ENSXMAG00000023729	-	99	50.628	ENSPKIG00000025682	RAB33B	93	52.273	Paramormyrops_kingsleyae
ENSXMAG00000023729	-	99	54.733	ENSPMGG00000003514	rab33ba	89	54.425	Periophthalmus_magnuspinnatus
ENSXMAG00000023729	-	100	67.220	ENSPMGG00000019510	-	92	65.766	Periophthalmus_magnuspinnatus
ENSXMAG00000023729	-	72	63.372	ENSPMAG00000007247	rab33ba	62	64.516	Petromyzon_marinus
ENSXMAG00000023729	-	90	56.422	ENSPFOG00000000349	rab33ba	78	58.209	Poecilia_formosa
ENSXMAG00000023729	-	92	91.855	ENSPFOG00000022360	-	92	91.855	Poecilia_formosa
ENSXMAG00000023729	-	92	90.950	ENSPLAG00000016172	-	92	90.950	Poecilia_latipinna
ENSXMAG00000023729	-	90	56.422	ENSPLAG00000021278	rab33ba	78	58.209	Poecilia_latipinna
ENSXMAG00000023729	-	92	91.403	ENSPMEG00000019646	-	92	91.403	Poecilia_mexicana
ENSXMAG00000023729	-	90	56.422	ENSPMEG00000022709	rab33ba	78	58.209	Poecilia_mexicana
ENSXMAG00000023729	-	88	56.398	ENSPREG00000000880	rab33ba	80	57.711	Poecilia_reticulata
ENSXMAG00000023729	-	92	90.950	ENSPREG00000001864	-	91	90.950	Poecilia_reticulata
ENSXMAG00000023729	-	92	54.751	ENSPPYG00000015072	RAB33B	86	55.000	Pongo_abelii
ENSXMAG00000023729	-	92	54.299	ENSPCAG00000010026	RAB33B	86	54.545	Procavia_capensis
ENSXMAG00000023729	-	92	54.751	ENSPCOG00000014314	RAB33B	86	55.000	Propithecus_coquereli
ENSXMAG00000023729	-	99	52.282	ENSPVAG00000009586	RAB33B	86	55.000	Pteropus_vampyrus
ENSXMAG00000023729	-	100	75.934	ENSPNYG00000003511	-	92	76.577	Pundamilia_nyererei
ENSXMAG00000023729	-	92	54.425	ENSPNYG00000013054	rab33ba	90	54.425	Pundamilia_nyererei
ENSXMAG00000023729	-	93	50.442	ENSPNAG00000014146	-	96	50.673	Pygocentrus_nattereri
ENSXMAG00000023729	-	84	60.199	ENSPNAG00000029115	rab33ba	85	60.697	Pygocentrus_nattereri
ENSXMAG00000023729	-	82	57.868	ENSRNOG00000013035	Rab33b	77	58.163	Rattus_norvegicus
ENSXMAG00000023729	-	93	54.505	ENSRBIG00000008435	RAB33B	86	54.751	Rhinopithecus_bieti
ENSXMAG00000023729	-	93	54.505	ENSRROG00000033951	RAB33B	86	54.751	Rhinopithecus_roxellana
ENSXMAG00000023729	-	93	54.505	ENSSBOG00000028836	RAB33B	86	54.751	Saimiri_boliviensis_boliviensis
ENSXMAG00000023729	-	83	57.071	ENSSFOG00015024034	rab33ba	87	56.701	Scleropages_formosus
ENSXMAG00000023729	-	92	52.036	ENSSFOG00015020112	rab33b	93	52.036	Scleropages_formosus
ENSXMAG00000023729	-	100	72.840	ENSSMAG00000012178	-	92	73.543	Scophthalmus_maximus
ENSXMAG00000023729	-	90	55.556	ENSSMAG00000015955	rab33ba	79	58.000	Scophthalmus_maximus
ENSXMAG00000023729	-	100	77.273	ENSSDUG00000019885	-	92	77.130	Seriola_dumerili
ENSXMAG00000023729	-	99	53.909	ENSSDUG00000001791	rab33ba	90	55.310	Seriola_dumerili
ENSXMAG00000023729	-	100	77.273	ENSSLDG00000008070	-	92	77.130	Seriola_lalandi_dorsalis
ENSXMAG00000023729	-	68	62.805	ENSSLDG00000008584	rab33ba	67	66.667	Seriola_lalandi_dorsalis
ENSXMAG00000023729	-	93	54.825	ENSSARG00000007843	RAB33B	81	56.863	Sorex_araneus
ENSXMAG00000023729	-	92	52.941	ENSSPUG00000008120	RAB33B	86	53.182	Sphenodon_punctatus
ENSXMAG00000023729	-	93	57.399	ENSSPAG00000004801	rab33ba	81	58.252	Stegastes_partitus
ENSXMAG00000023729	-	93	73.661	ENSSPAG00000010224	-	92	73.991	Stegastes_partitus
ENSXMAG00000023729	-	92	54.751	ENSSSCG00000020711	RAB33B	86	55.000	Sus_scrofa
ENSXMAG00000023729	-	99	52.479	ENSTGUG00000002436	RAB33B	88	54.299	Taeniopygia_guttata
ENSXMAG00000023729	-	91	56.881	ENSTRUG00000007036	rab33ba	79	57.711	Takifugu_rubripes
ENSXMAG00000023729	-	91	55.963	ENSTNIG00000010125	rab33ba	80	57.214	Tetraodon_nigroviridis
ENSXMAG00000023729	-	99	69.710	ENSTNIG00000012343	-	87	69.683	Tetraodon_nigroviridis
ENSXMAG00000023729	-	93	54.505	ENSUAMG00000022667	RAB33B	86	54.751	Ursus_americanus
ENSXMAG00000023729	-	100	53.846	ENSUMAG00000014975	RAB33B	88	54.751	Ursus_maritimus
ENSXMAG00000023729	-	92	54.299	ENSVVUG00000021440	RAB33B	88	54.545	Vulpes_vulpes
ENSXMAG00000023729	-	84	52.970	ENSXETG00000016920	rab33b	78	53.000	Xenopus_tropicalis
ENSXMAG00000023729	-	91	55.963	ENSXCOG00000000469	rab33ba	79	57.711	Xiphophorus_couchianus
ENSXMAG00000023729	-	100	90.833	ENSXCOG00000012032	-	100	90.833	Xiphophorus_couchianus
ENSXMAG00000023729	-	91	56.422	ENSXMAG00000004153	rab33ba	79	58.209	Xiphophorus_maculatus