EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000023876 (Gene tree)
Gene ID: 102229858
Gene Symbol: -
Alias: -
Full Name: TWIST neighbor
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 7364 bases
Position: chr13:22102553-22109916
Accession: 102229858
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000026702	SHS2_Rpb7-N	PF03876.17	3.5e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000025570	-	5409	XM_005802738	ENSXMAP00000026702	373 (aa)	XP_005802795	M3ZEI2

Gene Model

Click here to download ENSXMAG00000023876's gene model file

Pathways

Pathway ID	Pathway Name	Source
xma03020	RNA polymerase	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000023876's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000023876	-	96	54.400	ENSCSEG00000008986	-	62	68.670	Cynoglossus_semilaevis
ENSXMAG00000023876	-	95	61.622	ENSMAMG00000010095	-	94	61.622	Mastacembelus_armatus
ENSXMAG00000023876	-	71	70.000	ENSONIG00000010857	-	62	76.271	Oreochromis_niloticus
ENSXMAG00000023876	-	97	61.399	ENSOMEG00000015768	-	62	76.068	Oryzias_melastigma
ENSXMAG00000023876	-	97	90.959	ENSPFOG00000001131	-	97	86.027	Poecilia_formosa
ENSXMAG00000023876	-	97	90.959	ENSPLAG00000019986	-	97	86.027	Poecilia_latipinna
ENSXMAG00000023876	-	97	91.233	ENSPMEG00000022232	-	97	86.301	Poecilia_mexicana
ENSXMAG00000023876	-	97	88.219	ENSPREG00000003434	-	97	84.932	Poecilia_reticulata
ENSXMAG00000023876	-	97	64.474	ENSSLDG00000013316	-	61	80.426	Seriola_lalandi_dorsalis
ENSXMAG00000023876	-	99	54.762	ENSTRUG00000019854	-	61	72.532	Takifugu_rubripes