EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000024026 (Gene tree)
Gene ID: 102217614
Gene Symbol: -
Alias: -
Full Name: zinc finger protein 184-like
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 3417 bases
Position: chr13:8549497-8552913
Accession: 102217614
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000023315	zf-C2H2	PF00096.26	9.9e-24	1	5
ENSXMAP00000023315	zf-C2H2	PF00096.26	9.9e-24	2	5
ENSXMAP00000023315	zf-C2H2	PF00096.26	9.9e-24	3	5
ENSXMAP00000023315	zf-C2H2	PF00096.26	9.9e-24	4	5
ENSXMAP00000023315	zf-C2H2	PF00096.26	9.9e-24	5	5
ENSXMAP00000023315	zf-met	PF12874.7	0.00037	1	2
ENSXMAP00000023315	zf-met	PF12874.7	0.00037	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000022527	-	2040	XM_005805517	ENSXMAP00000023315	640 (aa)	XP_005805574	UPI000C6D90BD

Gene Model

Click here to download ENSXMAG00000024026's gene model file

Pathways

Pathway ID	Pathway Name	Source
xma05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000024026's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000024026	-	100	92.656	ENSPFOG00000022486	-	100	92.656	Poecilia_formosa
ENSXMAG00000024026	-	100	92.969	ENSPLAG00000006183	-	100	92.969	Poecilia_latipinna
ENSXMAG00000024026	-	100	93.125	ENSPMEG00000014769	-	100	93.125	Poecilia_mexicana