EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000024084 (Gene tree)
Gene ID: 102235744
Gene Symbol: rpusd1
Alias: fe26f08|wu:fe26f08|zgc:153465
Full Name: RNA pseudouridine synthase domain containing 1
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 3787 bases
Position: chr16:18102638-18106424
Accession: 102235744
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000036929	PseudoU_synth_2	PF00849.22	1.9e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000025479	-	2156	XM_014471413	ENSXMAP00000036929	304 (aa)	XP_014326899	M3ZGY6

Gene Model

Click here to download ENSXMAG00000024084's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000024084's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000024084	rpusd1	98	55.738	ENSG00000007376	RPUSD1	99	67.665	Homo_sapiens
ENSXMAG00000024084	rpusd1	100	79.739	ENSAPOG00000022221	rpusd1	99	80.583	Acanthochromis_polyacanthus
ENSXMAG00000024084	rpusd1	98	59.000	ENSAMEG00000007461	RPUSD1	98	59.000	Ailuropoda_melanoleuca
ENSXMAG00000024084	rpusd1	100	78.778	ENSACIG00000015863	rpusd1	100	79.032	Amphilophus_citrinellus
ENSXMAG00000024084	rpusd1	100	81.553	ENSAOCG00000021975	rpusd1	97	81.553	Amphiprion_ocellaris
ENSXMAG00000024084	rpusd1	100	81.877	ENSAPEG00000001316	rpusd1	97	81.877	Amphiprion_percula
ENSXMAG00000024084	rpusd1	100	78.964	ENSATEG00000002984	rpusd1	99	78.964	Anabas_testudineus
ENSXMAG00000024084	rpusd1	77	57.551	ENSAPLG00000012316	RPUSD1	98	57.551	Anas_platyrhynchos
ENSXMAG00000024084	rpusd1	98	62.876	ENSACAG00000008953	RPUSD1	99	62.876	Anolis_carolinensis
ENSXMAG00000024084	rpusd1	98	56.066	ENSANAG00000024709	RPUSD1	98	56.863	Aotus_nancymaae
ENSXMAG00000024084	rpusd1	100	78.778	ENSACLG00000013692	rpusd1	100	78.778	Astatotilapia_calliptera
ENSXMAG00000024084	rpusd1	99	70.100	ENSAMXG00000019802	rpusd1	99	70.100	Astyanax_mexicanus
ENSXMAG00000024084	rpusd1	98	59.801	ENSBTAG00000000179	RPUSD1	98	59.801	Bos_taurus
ENSXMAG00000024084	rpusd1	98	55.769	ENSCJAG00000012253	RPUSD1	98	56.536	Callithrix_jacchus
ENSXMAG00000024084	rpusd1	98	57.000	ENSCAFG00000019614	RPUSD1	98	58.000	Canis_familiaris
ENSXMAG00000024084	rpusd1	98	57.000	ENSCAFG00020008891	RPUSD1	98	58.000	Canis_lupus_dingo
ENSXMAG00000024084	rpusd1	98	60.465	ENSCHIG00000012872	RPUSD1	98	60.465	Capra_hircus
ENSXMAG00000024084	rpusd1	98	56.811	ENSTSYG00000036934	RPUSD1	98	56.811	Carlito_syrichta
ENSXMAG00000024084	rpusd1	98	56.436	ENSCAPG00000014219	RPUSD1	98	56.436	Cavia_aperea
ENSXMAG00000024084	rpusd1	98	56.436	ENSCPOG00000034604	RPUSD1	98	56.436	Cavia_porcellus
ENSXMAG00000024084	rpusd1	98	56.393	ENSCCAG00000034385	RPUSD1	98	57.190	Cebus_capucinus
ENSXMAG00000024084	rpusd1	98	54.859	ENSCATG00000042983	RPUSD1	98	56.863	Cercocebus_atys
ENSXMAG00000024084	rpusd1	98	55.667	ENSCLAG00000013966	RPUSD1	98	55.776	Chinchilla_lanigera
ENSXMAG00000024084	rpusd1	98	56.393	ENSCSAG00000012121	RPUSD1	98	56.863	Chlorocebus_sabaeus
ENSXMAG00000024084	rpusd1	98	61.258	ENSCPBG00000021101	RPUSD1	99	61.258	Chrysemys_picta_bellii
ENSXMAG00000024084	rpusd1	83	63.636	ENSCANG00000028576	RPUSD1	90	63.636	Colobus_angolensis_palliatus
ENSXMAG00000024084	rpusd1	98	58.472	ENSCGRG00001014253	Rpusd1	98	58.472	Cricetulus_griseus_chok1gshd
ENSXMAG00000024084	rpusd1	98	58.472	ENSCGRG00000017995	Rpusd1	98	58.472	Cricetulus_griseus_crigri
ENSXMAG00000024084	rpusd1	98	76.974	ENSCSEG00000018512	rpusd1	98	76.974	Cynoglossus_semilaevis
ENSXMAG00000024084	rpusd1	100	89.145	ENSCVAG00000022746	rpusd1	100	89.145	Cyprinodon_variegatus
ENSXMAG00000024084	rpusd1	98	70.569	ENSDARG00000060192	rpusd1	99	70.569	Danio_rerio
ENSXMAG00000024084	rpusd1	98	55.960	ENSDNOG00000003721	RPUSD1	98	55.629	Dasypus_novemcinctus
ENSXMAG00000024084	rpusd1	98	57.667	ENSDORG00000026656	Rpusd1	98	58.000	Dipodomys_ordii
ENSXMAG00000024084	rpusd1	96	47.403	ENSEBUG00000008767	rpusd1	92	47.403	Eptatretus_burgeri
ENSXMAG00000024084	rpusd1	98	56.958	ENSEASG00005018421	RPUSD1	74	56.958	Equus_asinus_asinus
ENSXMAG00000024084	rpusd1	99	69.453	ENSELUG00000014307	rpusd1	90	70.455	Esox_lucius
ENSXMAG00000024084	rpusd1	98	57.333	ENSFCAG00000010359	RPUSD1	98	57.333	Felis_catus
ENSXMAG00000024084	rpusd1	98	64.883	ENSFALG00000003211	RPUSD1	99	64.883	Ficedula_albicollis
ENSXMAG00000024084	rpusd1	98	57.000	ENSFDAG00000013398	RPUSD1	98	57.000	Fukomys_damarensis
ENSXMAG00000024084	rpusd1	100	87.622	ENSFHEG00000004736	rpusd1	100	90.228	Fundulus_heteroclitus
ENSXMAG00000024084	rpusd1	99	70.358	ENSGMOG00000010756	rpusd1	99	70.684	Gadus_morhua
ENSXMAG00000024084	rpusd1	98	63.696	ENSGALG00000005315	RPUSD1	99	63.696	Gallus_gallus
ENSXMAG00000024084	rpusd1	100	96.053	ENSGAFG00000009886	rpusd1	100	96.053	Gambusia_affinis
ENSXMAG00000024084	rpusd1	100	77.994	ENSGACG00000014276	rpusd1	100	77.994	Gasterosteus_aculeatus
ENSXMAG00000024084	rpusd1	98	60.065	ENSGAGG00000004181	RPUSD1	99	60.065	Gopherus_agassizii
ENSXMAG00000024084	rpusd1	98	56.536	ENSGGOG00000013997	RPUSD1	98	57.329	Gorilla_gorilla
ENSXMAG00000024084	rpusd1	100	79.100	ENSHBUG00000023728	rpusd1	100	79.100	Haplochromis_burtoni
ENSXMAG00000024084	rpusd1	98	56.667	ENSHGLG00000002595	RPUSD1	98	56.106	Heterocephalus_glaber_female
ENSXMAG00000024084	rpusd1	98	56.667	ENSHGLG00100014303	RPUSD1	98	56.106	Heterocephalus_glaber_male
ENSXMAG00000024084	rpusd1	99	73.333	ENSHCOG00000002390	rpusd1	99	73.333	Hippocampus_comes
ENSXMAG00000024084	rpusd1	98	67.785	ENSIPUG00000001570	rpusd1	99	67.559	Ictalurus_punctatus
ENSXMAG00000024084	rpusd1	98	57.333	ENSSTOG00000004276	RPUSD1	98	57.333	Ictidomys_tridecemlineatus
ENSXMAG00000024084	rpusd1	98	57.475	ENSJJAG00000015696	Rpusd1	98	57.807	Jaculus_jaculus
ENSXMAG00000024084	rpusd1	99	85.809	ENSKMAG00000017287	rpusd1	99	85.809	Kryptolebias_marmoratus
ENSXMAG00000024084	rpusd1	100	78.317	ENSLBEG00000013354	RPUSD1	99	78.317	Labrus_bergylta
ENSXMAG00000024084	rpusd1	100	78.317	ENSLBEG00000022502	rpusd1	99	78.317	Labrus_bergylta
ENSXMAG00000024084	rpusd1	98	62.829	ENSLACG00000008869	RPUSD1	99	62.829	Latimeria_chalumnae
ENSXMAG00000024084	rpusd1	70	81.776	ENSLOCG00000005682	rpusd1	99	81.776	Lepisosteus_oculatus
ENSXMAG00000024084	rpusd1	98	56.333	ENSLAFG00000002115	RPUSD1	98	56.333	Loxodonta_africana
ENSXMAG00000024084	rpusd1	98	56.393	ENSMFAG00000003961	RPUSD1	98	56.863	Macaca_fascicularis
ENSXMAG00000024084	rpusd1	98	56.393	ENSMMUG00000000842	RPUSD1	98	56.863	Macaca_mulatta
ENSXMAG00000024084	rpusd1	98	56.393	ENSMNEG00000042712	RPUSD1	98	56.863	Macaca_nemestrina
ENSXMAG00000024084	rpusd1	98	56.393	ENSMLEG00000030591	RPUSD1	98	56.863	Mandrillus_leucophaeus
ENSXMAG00000024084	rpusd1	100	81.613	ENSMAMG00000004735	rpusd1	99	81.613	Mastacembelus_armatus
ENSXMAG00000024084	rpusd1	100	78.778	ENSMZEG00005003214	rpusd1	100	78.778	Maylandia_zebra
ENSXMAG00000024084	rpusd1	96	64.310	ENSMGAG00000005447	RPUSD1	98	64.310	Meleagris_gallopavo
ENSXMAG00000024084	rpusd1	83	56.522	ENSMAUG00000019998	Rpusd1	96	56.522	Mesocricetus_auratus
ENSXMAG00000024084	rpusd1	98	56.333	ENSMICG00000017561	RPUSD1	98	56.333	Microcebus_murinus
ENSXMAG00000024084	rpusd1	98	59.000	ENSMOCG00000014082	Rpusd1	98	59.000	Microtus_ochrogaster
ENSXMAG00000024084	rpusd1	99	75.163	ENSMMOG00000012569	rpusd1	99	75.244	Mola_mola
ENSXMAG00000024084	rpusd1	99	61.716	ENSMODG00000016882	RPUSD1	99	61.716	Monodelphis_domestica
ENSXMAG00000024084	rpusd1	100	78.710	ENSMALG00000017818	rpusd1	99	78.846	Monopterus_albus
ENSXMAG00000024084	rpusd1	98	58.667	MGP_CAROLIEiJ_G0021244	Rpusd1	98	58.667	Mus_caroli
ENSXMAG00000024084	rpusd1	98	58.667	ENSMUSG00000041199	Rpusd1	98	58.667	Mus_musculus
ENSXMAG00000024084	rpusd1	98	57.705	MGP_PahariEiJ_G0023562	Rpusd1	98	58.361	Mus_pahari
ENSXMAG00000024084	rpusd1	98	58.667	MGP_SPRETEiJ_G0022155	Rpusd1	98	58.667	Mus_spretus
ENSXMAG00000024084	rpusd1	96	56.610	ENSMPUG00000015897	RPUSD1	96	56.949	Mustela_putorius_furo
ENSXMAG00000024084	rpusd1	98	56.250	ENSMLUG00000001089	RPUSD1	98	57.049	Myotis_lucifugus
ENSXMAG00000024084	rpusd1	98	57.667	ENSNGAG00000003595	Rpusd1	98	57.667	Nannospalax_galili
ENSXMAG00000024084	rpusd1	100	80.263	ENSNBRG00000006457	rpusd1	100	80.263	Neolamprologus_brichardi
ENSXMAG00000024084	rpusd1	53	47.647	ENSNLEG00000008424	-	97	47.953	Nomascus_leucogenys
ENSXMAG00000024084	rpusd1	98	61.538	ENSMEUG00000016049	RPUSD1	98	61.538	Notamacropus_eugenii
ENSXMAG00000024084	rpusd1	98	50.333	ENSOPRG00000008340	RPUSD1	98	50.333	Ochotona_princeps
ENSXMAG00000024084	rpusd1	98	55.333	ENSODEG00000016945	RPUSD1	98	55.333	Octodon_degus
ENSXMAG00000024084	rpusd1	99	78.896	ENSONIG00000015672	rpusd1	100	78.896	Oreochromis_niloticus
ENSXMAG00000024084	rpusd1	100	77.705	ENSORLG00000013009	rpusd1	99	77.705	Oryzias_latipes
ENSXMAG00000024084	rpusd1	100	77.377	ENSORLG00020010382	rpusd1	99	77.377	Oryzias_latipes_hni
ENSXMAG00000024084	rpusd1	100	77.049	ENSORLG00015021354	rpusd1	99	77.049	Oryzias_latipes_hsok
ENSXMAG00000024084	rpusd1	100	78.618	ENSOMEG00000021426	rpusd1	99	78.618	Oryzias_melastigma
ENSXMAG00000024084	rpusd1	98	56.393	ENSOGAG00000003795	RPUSD1	98	56.393	Otolemur_garnettii
ENSXMAG00000024084	rpusd1	98	60.133	ENSOARG00000014254	RPUSD1	98	60.133	Ovis_aries
ENSXMAG00000024084	rpusd1	98	56.066	ENSPPAG00000034797	RPUSD1	98	56.863	Pan_paniscus
ENSXMAG00000024084	rpusd1	98	57.667	ENSPPRG00000012389	RPUSD1	98	57.667	Panthera_pardus
ENSXMAG00000024084	rpusd1	99	57.616	ENSPTIG00000008545	RPUSD1	77	72.277	Panthera_tigris_altaica
ENSXMAG00000024084	rpusd1	98	56.066	ENSPTRG00000007565	RPUSD1	98	56.863	Pan_troglodytes
ENSXMAG00000024084	rpusd1	98	56.393	ENSPANG00000024401	RPUSD1	98	56.863	Papio_anubis
ENSXMAG00000024084	rpusd1	100	69.408	ENSPKIG00000018890	rpusd1	91	69.408	Paramormyrops_kingsleyae
ENSXMAG00000024084	rpusd1	98	63.576	ENSPSIG00000013945	RPUSD1	99	63.576	Pelodiscus_sinensis
ENSXMAG00000024084	rpusd1	100	74.013	ENSPMGG00000014950	rpusd1	99	74.675	Periophthalmus_magnuspinnatus
ENSXMAG00000024084	rpusd1	98	58.000	ENSPEMG00000000497	Rpusd1	98	58.000	Peromyscus_maniculatus_bairdii
ENSXMAG00000024084	rpusd1	99	54.276	ENSPMAG00000001563	rpusd1	99	54.072	Petromyzon_marinus
ENSXMAG00000024084	rpusd1	98	62.662	ENSPCIG00000021216	-	92	62.662	Phascolarctos_cinereus
ENSXMAG00000024084	rpusd1	100	94.408	ENSPFOG00000007946	rpusd1	100	94.408	Poecilia_formosa
ENSXMAG00000024084	rpusd1	100	94.408	ENSPLAG00000011925	rpusd1	100	94.408	Poecilia_latipinna
ENSXMAG00000024084	rpusd1	100	94.408	ENSPMEG00000002910	rpusd1	100	94.408	Poecilia_mexicana
ENSXMAG00000024084	rpusd1	100	95.724	ENSPREG00000019851	rpusd1	100	95.724	Poecilia_reticulata
ENSXMAG00000024084	rpusd1	98	44.333	ENSPCAG00000002258	RPUSD1	98	44.333	Procavia_capensis
ENSXMAG00000024084	rpusd1	98	55.738	ENSPCOG00000022582	RPUSD1	98	55.519	Propithecus_coquereli
ENSXMAG00000024084	rpusd1	98	53.268	ENSPVAG00000013104	RPUSD1	98	53.595	Pteropus_vampyrus
ENSXMAG00000024084	rpusd1	100	79.100	ENSPNYG00000024076	rpusd1	100	79.100	Pundamilia_nyererei
ENSXMAG00000024084	rpusd1	99	68.771	ENSPNAG00000013806	rpusd1	99	68.771	Pygocentrus_nattereri
ENSXMAG00000024084	rpusd1	98	58.667	ENSRNOG00000023639	Rpusd1	98	59.076	Rattus_norvegicus
ENSXMAG00000024084	rpusd1	98	56.721	ENSRBIG00000030238	RPUSD1	98	57.516	Rhinopithecus_bieti
ENSXMAG00000024084	rpusd1	98	56.721	ENSRROG00000036663	RPUSD1	98	57.516	Rhinopithecus_roxellana
ENSXMAG00000024084	rpusd1	98	57.333	ENSSBOG00000033063	RPUSD1	98	58.000	Saimiri_boliviensis_boliviensis
ENSXMAG00000024084	rpusd1	98	62.207	ENSSHAG00000013500	RPUSD1	98	62.207	Sarcophilus_harrisii
ENSXMAG00000024084	rpusd1	98	71.906	ENSSFOG00015014394	rpusd1	99	71.906	Scleropages_formosus
ENSXMAG00000024084	rpusd1	100	82.201	ENSSMAG00000008045	rpusd1	93	82.201	Scophthalmus_maximus
ENSXMAG00000024084	rpusd1	100	82.201	ENSSDUG00000001829	rpusd1	97	82.201	Seriola_dumerili
ENSXMAG00000024084	rpusd1	100	82.201	ENSSLDG00000020853	rpusd1	97	82.201	Seriola_lalandi_dorsalis
ENSXMAG00000024084	rpusd1	54	72.289	ENSSARG00000011187	-	99	72.289	Sorex_araneus
ENSXMAG00000024084	rpusd1	62	61.376	ENSSPUG00000005119	-	98	61.376	Sphenodon_punctatus
ENSXMAG00000024084	rpusd1	100	84.142	ENSSPAG00000012708	rpusd1	99	84.142	Stegastes_partitus
ENSXMAG00000024084	rpusd1	98	57.705	ENSSSCG00000008000	RPUSD1	98	65.354	Sus_scrofa
ENSXMAG00000024084	rpusd1	81	71.429	ENSTGUG00000015375	RPUSD1	97	71.429	Taeniopygia_guttata
ENSXMAG00000024084	rpusd1	100	74.434	ENSTRUG00000003041	rpusd1	99	76.375	Takifugu_rubripes
ENSXMAG00000024084	rpusd1	99	71.761	ENSTNIG00000002660	rpusd1	99	71.761	Tetraodon_nigroviridis
ENSXMAG00000024084	rpusd1	98	58.361	ENSTTRG00000010167	RPUSD1	98	58.824	Tursiops_truncatus
ENSXMAG00000024084	rpusd1	98	57.947	ENSUAMG00000012736	RPUSD1	98	58.278	Ursus_americanus
ENSXMAG00000024084	rpusd1	98	58.000	ENSUMAG00000021174	RPUSD1	94	62.548	Ursus_maritimus
ENSXMAG00000024084	rpusd1	98	58.667	ENSVVUG00000012357	RPUSD1	98	58.667	Vulpes_vulpes
ENSXMAG00000024084	rpusd1	98	62.876	ENSXETG00000007184	rpusd1	98	62.876	Xenopus_tropicalis
ENSXMAG00000024084	rpusd1	100	98.355	ENSXCOG00000017930	rpusd1	100	98.355	Xiphophorus_couchianus