EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000024104 (Gene tree)
Gene ID: 111608529
Gene Symbol: si:ch211-113e8.11
Alias: -
Full Name: nucleolar and coiled-body phosphoprotein 1-like
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 1482 bases
Position: chr5:13659191-13660672
Accession: 111608529
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000035425	zf-CCCH	PF00642.24	1.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000038735	-	1386	XM_023333303	ENSXMAP00000035425	241 (aa)	XP_023189071	UPI000C6D9235

Gene Model

Click here to download ENSXMAG00000024104's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000024104's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000024104	si:ch211-113e8.11	100	62.308	ENSAPOG00000010990	si:ch211-113e8.11	100	63.462	Acanthochromis_polyacanthus
ENSXMAG00000024104	si:ch211-113e8.11	58	72.414	ENSACIG00000011566	si:ch211-113e8.11	94	63.107	Amphilophus_citrinellus
ENSXMAG00000024104	si:ch211-113e8.11	100	63.953	ENSAOCG00000022156	si:ch211-113e8.11	100	64.341	Amphiprion_ocellaris
ENSXMAG00000024104	si:ch211-113e8.11	100	63.566	ENSAPEG00000018284	si:ch211-113e8.11	100	63.953	Amphiprion_percula
ENSXMAG00000024104	si:ch211-113e8.11	100	63.415	ENSATEG00000018391	si:ch211-113e8.11	100	64.113	Anabas_testudineus
ENSXMAG00000024104	si:ch211-113e8.11	100	64.113	ENSACLG00000017011	si:ch211-113e8.11	100	64.113	Astatotilapia_calliptera
ENSXMAG00000024104	si:ch211-113e8.11	97	48.627	ENSAMXG00000000733	si:ch211-113e8.11	97	49.412	Astyanax_mexicanus
ENSXMAG00000024104	si:ch211-113e8.11	99	56.299	ENSCSEG00000004538	si:ch211-113e8.11	99	56.299	Cynoglossus_semilaevis
ENSXMAG00000024104	si:ch211-113e8.11	100	75.403	ENSCVAG00000020156	si:ch211-113e8.11	99	74.597	Cyprinodon_variegatus
ENSXMAG00000024104	si:ch211-113e8.11	95	47.280	ENSDARG00000076585	si:ch211-113e8.11	97	50.209	Danio_rerio
ENSXMAG00000024104	si:ch211-113e8.11	59	32.911	FBgn0259728	CG42382	77	32.911	Drosophila_melanogaster
ENSXMAG00000024104	si:ch211-113e8.11	100	53.788	ENSELUG00000001130	si:ch211-113e8.11	100	53.208	Esox_lucius
ENSXMAG00000024104	si:ch211-113e8.11	100	65.714	ENSFHEG00000007870	si:ch211-113e8.11	99	64.516	Fundulus_heteroclitus
ENSXMAG00000024104	si:ch211-113e8.11	100	94.191	ENSGAFG00000020570	si:ch211-113e8.11	100	94.191	Gambusia_affinis
ENSXMAG00000024104	si:ch211-113e8.11	100	62.903	ENSHBUG00000003552	si:ch211-113e8.11	100	63.306	Haplochromis_burtoni
ENSXMAG00000024104	si:ch211-113e8.11	99	54.618	ENSHCOG00000002041	si:ch211-113e8.11	99	54.582	Hippocampus_comes
ENSXMAG00000024104	si:ch211-113e8.11	95	50.424	ENSIPUG00000002260	si:ch211-113e8.11	93	50.424	Ictalurus_punctatus
ENSXMAG00000024104	si:ch211-113e8.11	100	69.636	ENSKMAG00000000086	si:ch211-113e8.11	99	69.636	Kryptolebias_marmoratus
ENSXMAG00000024104	si:ch211-113e8.11	100	55.056	ENSLBEG00000008353	si:ch211-113e8.11	100	57.678	Labrus_bergylta
ENSXMAG00000024104	si:ch211-113e8.11	63	46.711	ENSLACG00000004304	si:ch211-113e8.11	77	46.711	Latimeria_chalumnae
ENSXMAG00000024104	si:ch211-113e8.11	98	53.383	ENSMAMG00000019098	si:ch211-113e8.11	90	61.135	Mastacembelus_armatus
ENSXMAG00000024104	si:ch211-113e8.11	100	64.634	ENSMZEG00005023658	si:ch211-113e8.11	100	64.634	Maylandia_zebra
ENSXMAG00000024104	si:ch211-113e8.11	66	68.485	ENSMMOG00000007254	si:ch211-113e8.11	77	68.485	Mola_mola
ENSXMAG00000024104	si:ch211-113e8.11	100	61.240	ENSMALG00000005110	si:ch211-113e8.11	100	61.628	Monopterus_albus
ENSXMAG00000024104	si:ch211-113e8.11	100	64.113	ENSNBRG00000015060	si:ch211-113e8.11	100	64.113	Neolamprologus_brichardi
ENSXMAG00000024104	si:ch211-113e8.11	100	58.103	ENSORLG00000023699	si:ch211-113e8.11	100	56.917	Oryzias_latipes
ENSXMAG00000024104	si:ch211-113e8.11	100	57.312	ENSORLG00020022094	si:ch211-113e8.11	100	56.917	Oryzias_latipes_hni
ENSXMAG00000024104	si:ch211-113e8.11	100	56.917	ENSORLG00015002588	si:ch211-113e8.11	100	56.522	Oryzias_latipes_hsok
ENSXMAG00000024104	si:ch211-113e8.11	100	56.680	ENSOMEG00000010624	si:ch211-113e8.11	100	58.704	Oryzias_melastigma
ENSXMAG00000024104	si:ch211-113e8.11	55	56.738	ENSPKIG00000023576	si:ch211-113e8.11	96	45.783	Paramormyrops_kingsleyae
ENSXMAG00000024104	si:ch211-113e8.11	96	56.410	ENSPMGG00000018547	si:ch211-113e8.11	97	54.852	Periophthalmus_magnuspinnatus
ENSXMAG00000024104	si:ch211-113e8.11	98	91.915	ENSPFOG00000007950	si:ch211-113e8.11	100	91.915	Poecilia_formosa
ENSXMAG00000024104	si:ch211-113e8.11	100	92.946	ENSPLAG00000002081	si:ch211-113e8.11	100	92.946	Poecilia_latipinna
ENSXMAG00000024104	si:ch211-113e8.11	100	93.361	ENSPMEG00000017505	si:ch211-113e8.11	100	93.361	Poecilia_mexicana
ENSXMAG00000024104	si:ch211-113e8.11	100	90.041	ENSPREG00000008530	si:ch211-113e8.11	100	89.627	Poecilia_reticulata
ENSXMAG00000024104	si:ch211-113e8.11	100	64.113	ENSPNYG00000022856	si:ch211-113e8.11	100	64.113	Pundamilia_nyererei
ENSXMAG00000024104	si:ch211-113e8.11	98	37.838	ENSPNAG00000013782	si:ch211-113e8.11	70	47.093	Pygocentrus_nattereri
ENSXMAG00000024104	si:ch211-113e8.11	97	44.758	ENSSFOG00015000959	si:ch211-113e8.11	97	45.635	Scleropages_formosus
ENSXMAG00000024104	si:ch211-113e8.11	100	59.761	ENSSMAG00000009732	si:ch211-113e8.11	100	60.558	Scophthalmus_maximus
ENSXMAG00000024104	si:ch211-113e8.11	100	64.844	ENSSDUG00000000112	si:ch211-113e8.11	100	63.922	Seriola_dumerili
ENSXMAG00000024104	si:ch211-113e8.11	100	64.062	ENSSLDG00000003287	si:ch211-113e8.11	100	63.137	Seriola_lalandi_dorsalis
ENSXMAG00000024104	si:ch211-113e8.11	100	64.202	ENSSPAG00000001375	si:ch211-113e8.11	100	63.813	Stegastes_partitus
ENSXMAG00000024104	si:ch211-113e8.11	99	53.012	ENSTRUG00000023898	si:ch211-113e8.11	99	53.200	Takifugu_rubripes