EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000024122 (Gene tree)
Gene ID: 102218776
Gene Symbol: rab18a
Alias: fc62e07|wu:fc62e07|zgc:77145
Full Name: RAB18%2C member RAS oncogene family
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 8864 bases
Position: chr21:19988148-19997011
Accession: 102218776
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000024055	MMR_HSR1	PF01926.23	1.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000013675	-	543	-	ENSXMAP00000013659	180 (aa)	-	M4AGR5
ENSXMAT00000027838	-	2168	XM_023326680	ENSXMAP00000024055	204 (aa)	XP_023182448	UPI000C6CEDDD

Gene Model

Click here to download ENSXMAG00000024122's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000024122's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000024122	rab18a	100	95.098	ENSAPOG00000010760	rab18a	94	96.335	Acanthochromis_polyacanthus
ENSXMAG00000024122	rab18a	100	84.804	ENSACIG00000009617	rab18a	93	85.340	Amphilophus_citrinellus
ENSXMAG00000024122	rab18a	100	95.588	ENSAOCG00000016233	rab18a	94	96.859	Amphiprion_ocellaris
ENSXMAG00000024122	rab18a	100	95.588	ENSAPEG00000005392	rab18a	94	96.859	Amphiprion_percula
ENSXMAG00000024122	rab18a	100	93.627	ENSATEG00000021911	rab18a	94	94.764	Anabas_testudineus
ENSXMAG00000024122	rab18a	100	87.805	ENSACAG00000005463	-	94	89.062	Anolis_carolinensis
ENSXMAG00000024122	rab18a	100	95.098	ENSACLG00000011484	rab18a	100	95.098	Astatotilapia_calliptera
ENSXMAG00000024122	rab18a	100	87.379	ENSCPBG00000015839	-	93	88.482	Chrysemys_picta_bellii
ENSXMAG00000024122	rab18a	96	69.154	ENSCPBG00000027619	-	94	70.899	Chrysemys_picta_bellii
ENSXMAG00000024122	rab18a	97	74.372	ENSCING00000006838	-	95	76.190	Ciona_intestinalis
ENSXMAG00000024122	rab18a	97	73.367	ENSCSAVG00000010348	-	94	75.532	Ciona_savignyi
ENSXMAG00000024122	rab18a	100	94.118	ENSCSEG00000011816	rab18a	94	95.812	Cynoglossus_semilaevis
ENSXMAG00000024122	rab18a	100	98.039	ENSCVAG00000015451	rab18a	100	98.039	Cyprinodon_variegatus
ENSXMAG00000024122	rab18a	100	81.463	ENSDARG00000055291	rab18a	92	84.656	Danio_rerio
ENSXMAG00000024122	rab18a	100	89.756	ENSELUG00000003805	rab18a	93	91.623	Esox_lucius
ENSXMAG00000024122	rab18a	100	97.059	ENSFHEG00000019455	rab18a	100	97.059	Fundulus_heteroclitus
ENSXMAG00000024122	rab18a	100	99.510	ENSGAFG00000002790	rab18a	100	99.510	Gambusia_affinis
ENSXMAG00000024122	rab18a	100	87.379	ENSGAGG00000015642	-	93	88.482	Gopherus_agassizii
ENSXMAG00000024122	rab18a	100	95.098	ENSHBUG00000001518	rab18a	100	95.098	Haplochromis_burtoni
ENSXMAG00000024122	rab18a	99	95.074	ENSLBEG00000005861	rab18a	90	95.812	Labrus_bergylta
ENSXMAG00000024122	rab18a	93	88.421	ENSLACG00000009310	rab18a	92	88.421	Latimeria_chalumnae
ENSXMAG00000024122	rab18a	100	88.780	ENSLOCG00000007491	rab18a	93	90.052	Lepisosteus_oculatus
ENSXMAG00000024122	rab18a	100	92.157	ENSMAMG00000014320	rab18a	94	93.717	Mastacembelus_armatus
ENSXMAG00000024122	rab18a	100	94.608	ENSMZEG00005017235	rab18a	94	96.335	Maylandia_zebra
ENSXMAG00000024122	rab18a	100	94.118	ENSMALG00000009813	rab18a	94	95.288	Monopterus_albus
ENSXMAG00000024122	rab18a	100	95.098	ENSNBRG00000013507	rab18a	100	95.098	Neolamprologus_brichardi
ENSXMAG00000024122	rab18a	94	96.354	ENSORLG00000004624	rab18a	94	96.335	Oryzias_latipes
ENSXMAG00000024122	rab18a	94	96.875	ENSORLG00020008333	rab18a	94	96.859	Oryzias_latipes_hni
ENSXMAG00000024122	rab18a	94	95.833	ENSORLG00015004739	rab18a	94	95.812	Oryzias_latipes_hsok
ENSXMAG00000024122	rab18a	100	95.588	ENSOMEG00000020605	rab18a	100	95.588	Oryzias_melastigma
ENSXMAG00000024122	rab18a	100	88.293	ENSPKIG00000009825	rab18a	92	90.476	Paramormyrops_kingsleyae
ENSXMAG00000024122	rab18a	100	93.627	ENSPMGG00000020409	-	94	94.241	Periophthalmus_magnuspinnatus
ENSXMAG00000024122	rab18a	100	99.510	ENSPFOG00000007571	rab18a	100	99.510	Poecilia_formosa
ENSXMAG00000024122	rab18a	100	99.510	ENSPLAG00000010104	rab18a	100	99.510	Poecilia_latipinna
ENSXMAG00000024122	rab18a	100	99.510	ENSPMEG00000013085	rab18a	100	99.510	Poecilia_mexicana
ENSXMAG00000024122	rab18a	100	99.510	ENSPREG00000005923	rab18a	83	99.510	Poecilia_reticulata
ENSXMAG00000024122	rab18a	100	95.098	ENSPNYG00000007064	rab18a	100	95.098	Pundamilia_nyererei
ENSXMAG00000024122	rab18a	99	80.597	ENSPNAG00000011548	rab18a	95	83.684	Pygocentrus_nattereri
ENSXMAG00000024122	rab18a	100	89.268	ENSSFOG00015017444	rab18a	78	91.579	Scleropages_formosus
ENSXMAG00000024122	rab18a	94	92.746	ENSSMAG00000002969	rab18a	94	92.708	Scophthalmus_maximus
ENSXMAG00000024122	rab18a	94	95.312	ENSSDUG00000003823	rab18a	94	95.288	Seriola_dumerili
ENSXMAG00000024122	rab18a	94	95.312	ENSSLDG00000006977	rab18a	94	95.288	Seriola_lalandi_dorsalis
ENSXMAG00000024122	rab18a	93	89.418	ENSSPUG00000017677	-	92	88.947	Sphenodon_punctatus
ENSXMAG00000024122	rab18a	100	91.176	ENSTRUG00000004984	rab18a	94	92.147	Takifugu_rubripes
ENSXMAG00000024122	rab18a	100	88.350	ENSUMAG00000015574	-	91	89.894	Ursus_maritimus
ENSXMAG00000024122	rab18a	100	86.893	ENSXETG00000004556	rab18	93	89.529	Xenopus_tropicalis