EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000024266 (Gene tree)
Gene ID: 102236933
Gene Symbol: tsen34
Alias: si:ch211-203b8.3
Full Name: tRNA splicing endonuclease subunit 34
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 7634 bases
Position: chr18:1865307-1872940
Accession: 102236933
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000032623	tRNA_int_endo	PF01974.17	1.8e-14	1	1
ENSXMAP00000038881	tRNA_int_endo	PF01974.17	1.8e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000031478	-	5641	-	ENSXMAP00000038881	286 (aa)	-	UPI000C6E25D8
ENSXMAT00000037054	-	3898	XM_023351979	ENSXMAP00000032623	286 (aa)	XP_023207747	UPI000C6E25D8

Gene Model

Click here to download ENSXMAG00000024266's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000024266's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000024266	tsen34	93	40.260	ENSG00000170892	TSEN34	99	40.260	Homo_sapiens
ENSXMAG00000024266	tsen34	94	74.453	ENSAPOG00000008579	-	100	74.453	Acanthochromis_polyacanthus
ENSXMAG00000024266	tsen34	89	77.559	ENSAPOG00000012557	-	87	77.559	Acanthochromis_polyacanthus
ENSXMAG00000024266	tsen34	100	74.828	ENSAPOG00000001248	tsen34	100	74.828	Acanthochromis_polyacanthus
ENSXMAG00000024266	tsen34	86	39.510	ENSAMEG00000004585	TSEN34	100	39.510	Ailuropoda_melanoleuca
ENSXMAG00000024266	tsen34	98	75.265	ENSACIG00000007110	tsen34	91	75.265	Amphilophus_citrinellus
ENSXMAG00000024266	tsen34	100	73.103	ENSAOCG00000006905	tsen34	100	73.103	Amphiprion_ocellaris
ENSXMAG00000024266	tsen34	100	73.103	ENSAPEG00000019171	tsen34	100	73.103	Amphiprion_percula
ENSXMAG00000024266	tsen34	95	72.826	ENSATEG00000019800	tsen34	96	72.826	Anabas_testudineus
ENSXMAG00000024266	tsen34	94	39.172	ENSACAG00000016189	TSEN34	99	39.809	Anolis_carolinensis
ENSXMAG00000024266	tsen34	93	39.297	ENSANAG00000026113	TSEN34	99	40.584	Aotus_nancymaae
ENSXMAG00000024266	tsen34	97	73.022	ENSACLG00000009661	tsen34	95	73.285	Astatotilapia_calliptera
ENSXMAG00000024266	tsen34	97	58.042	ENSAMXG00000017568	tsen34	92	57.338	Astyanax_mexicanus
ENSXMAG00000024266	tsen34	93	39.550	ENSBTAG00000006486	TSEN34	99	39.550	Bos_taurus
ENSXMAG00000024266	tsen34	93	42.568	ENSCJAG00000001128	TSEN34	99	42.568	Callithrix_jacchus
ENSXMAG00000024266	tsen34	93	38.387	ENSCAFG00000002675	TSEN34	99	38.387	Canis_familiaris
ENSXMAG00000024266	tsen34	93	38.636	ENSCAFG00020018350	TSEN34	99	38.636	Canis_lupus_dingo
ENSXMAG00000024266	tsen34	93	40.594	ENSCHIG00000020705	TSEN34	99	40.594	Capra_hircus
ENSXMAG00000024266	tsen34	89	38.776	ENSTSYG00000028200	TSEN34	95	39.796	Carlito_syrichta
ENSXMAG00000024266	tsen34	93	40.333	ENSCPOG00000012672	TSEN34	99	41.611	Cavia_porcellus
ENSXMAG00000024266	tsen34	93	40.260	ENSCCAG00000036023	TSEN34	99	41.424	Cebus_capucinus
ENSXMAG00000024266	tsen34	89	38.851	ENSCATG00000033390	TSEN34	93	38.851	Cercocebus_atys
ENSXMAG00000024266	tsen34	93	39.088	ENSCLAG00000000618	TSEN34	99	41.196	Chinchilla_lanigera
ENSXMAG00000024266	tsen34	93	40.260	ENSCSAG00000001891	TSEN34	99	40.260	Chlorocebus_sabaeus
ENSXMAG00000024266	tsen34	93	40.584	ENSCANG00000040984	TSEN34	99	40.584	Colobus_angolensis_palliatus
ENSXMAG00000024266	tsen34	93	38.658	ENSCGRG00001006296	Tsen34	99	40.256	Cricetulus_griseus_chok1gshd
ENSXMAG00000024266	tsen34	98	65.493	ENSCSEG00000006278	tsen34	93	65.493	Cynoglossus_semilaevis
ENSXMAG00000024266	tsen34	99	52.041	ENSDARG00000061370	tsen34	94	51.361	Danio_rerio
ENSXMAG00000024266	tsen34	93	38.436	ENSDNOG00000039332	TSEN34	99	36.808	Dasypus_novemcinctus
ENSXMAG00000024266	tsen34	93	39.934	ENSDORG00000029071	Tsen34	99	39.934	Dipodomys_ordii
ENSXMAG00000024266	tsen34	93	41.234	ENSEASG00005021580	TSEN34	99	41.234	Equus_asinus_asinus
ENSXMAG00000024266	tsen34	97	40.252	ENSECAG00000019651	TSEN34	88	40.252	Equus_caballus
ENSXMAG00000024266	tsen34	52	35.829	ENSEEUG00000005692	TSEN34	66	35.829	Erinaceus_europaeus
ENSXMAG00000024266	tsen34	94	55.634	ENSELUG00000006262	tsen34	92	55.634	Esox_lucius
ENSXMAG00000024266	tsen34	93	40.584	ENSFCAG00000014045	TSEN34	99	40.584	Felis_catus
ENSXMAG00000024266	tsen34	99	83.566	ENSFHEG00000008791	tsen34	97	83.916	Fundulus_heteroclitus
ENSXMAG00000024266	tsen34	68	64.824	ENSGMOG00000001961	tsen34	97	64.824	Gadus_morhua
ENSXMAG00000024266	tsen34	100	92.308	ENSGAFG00000016880	tsen34	100	92.308	Gambusia_affinis
ENSXMAG00000024266	tsen34	94	64.068	ENSGACG00000004800	tsen34	99	63.973	Gasterosteus_aculeatus
ENSXMAG00000024266	tsen34	98	40.656	ENSGAGG00000008982	TSEN34	76	40.656	Gopherus_agassizii
ENSXMAG00000024266	tsen34	93	40.264	ENSGGOG00000008197	TSEN34	99	40.594	Gorilla_gorilla
ENSXMAG00000024266	tsen34	97	73.381	ENSHBUG00000016593	tsen34	86	73.381	Haplochromis_burtoni
ENSXMAG00000024266	tsen34	93	41.176	ENSHGLG00000017619	TSEN34	99	40.777	Heterocephalus_glaber_female
ENSXMAG00000024266	tsen34	99	58.333	ENSHCOG00000001368	tsen34	100	58.333	Hippocampus_comes
ENSXMAG00000024266	tsen34	100	52.824	ENSIPUG00000008359	tsen34	93	52.824	Ictalurus_punctatus
ENSXMAG00000024266	tsen34	91	39.333	ENSSTOG00000023816	TSEN34	96	41.000	Ictidomys_tridecemlineatus
ENSXMAG00000024266	tsen34	93	39.103	ENSJJAG00000016301	Tsen34	99	39.103	Jaculus_jaculus
ENSXMAG00000024266	tsen34	95	79.927	ENSKMAG00000007181	tsen34	91	77.778	Kryptolebias_marmoratus
ENSXMAG00000024266	tsen34	98	75.357	ENSLBEG00000015001	tsen34	98	75.357	Labrus_bergylta
ENSXMAG00000024266	tsen34	94	54.745	ENSLOCG00000001887	tsen34	97	54.745	Lepisosteus_oculatus
ENSXMAG00000024266	tsen34	93	38.854	ENSLAFG00000015215	TSEN34	99	38.854	Loxodonta_africana
ENSXMAG00000024266	tsen34	93	40.260	ENSMFAG00000044825	TSEN34	99	40.260	Macaca_fascicularis
ENSXMAG00000024266	tsen34	93	40.260	ENSMMUG00000016571	TSEN34	99	40.260	Macaca_mulatta
ENSXMAG00000024266	tsen34	93	40.260	ENSMNEG00000045457	TSEN34	99	40.260	Macaca_nemestrina
ENSXMAG00000024266	tsen34	76	37.209	ENSMLEG00000034295	TSEN34	75	42.029	Mandrillus_leucophaeus
ENSXMAG00000024266	tsen34	99	71.579	ENSMAMG00000018407	tsen34	100	73.333	Mastacembelus_armatus
ENSXMAG00000024266	tsen34	97	74.101	ENSMZEG00005002313	tsen34	96	74.101	Maylandia_zebra
ENSXMAG00000024266	tsen34	73	34.524	ENSMAUG00000019716	Tsen34	80	34.921	Mesocricetus_auratus
ENSXMAG00000024266	tsen34	93	39.610	ENSMICG00000002409	TSEN34	99	39.935	Microcebus_murinus
ENSXMAG00000024266	tsen34	93	37.975	ENSMOCG00000022190	Tsen34	99	38.924	Microtus_ochrogaster
ENSXMAG00000024266	tsen34	95	70.134	ENSMMOG00000009551	tsen34	94	66.409	Mola_mola
ENSXMAG00000024266	tsen34	95	40.000	ENSMODG00000003984	-	77	41.250	Monodelphis_domestica
ENSXMAG00000024266	tsen34	97	70.357	ENSMALG00000018918	tsen34	96	72.302	Monopterus_albus
ENSXMAG00000024266	tsen34	93	38.835	MGP_CAROLIEiJ_G0029099	Tsen34	99	38.835	Mus_caroli
ENSXMAG00000024266	tsen34	93	38.710	ENSMUSG00000035585	Tsen34	99	38.710	Mus_musculus
ENSXMAG00000024266	tsen34	93	38.907	MGP_PahariEiJ_G0020968	Tsen34	99	38.907	Mus_pahari
ENSXMAG00000024266	tsen34	93	38.710	MGP_SPRETEiJ_G0030152	Tsen34	99	38.710	Mus_spretus
ENSXMAG00000024266	tsen34	93	38.636	ENSMPUG00000010373	TSEN34	99	39.286	Mustela_putorius_furo
ENSXMAG00000024266	tsen34	93	40.129	ENSMLUG00000016894	TSEN34	99	40.129	Myotis_lucifugus
ENSXMAG00000024266	tsen34	73	33.977	ENSNGAG00000016187	Tsen34	92	35.600	Nannospalax_galili
ENSXMAG00000024266	tsen34	93	72.325	ENSNBRG00000008640	tsen34	98	72.325	Neolamprologus_brichardi
ENSXMAG00000024266	tsen34	93	40.728	ENSNLEG00000006309	TSEN34	99	41.060	Nomascus_leucogenys
ENSXMAG00000024266	tsen34	91	44.891	ENSMEUG00000002978	TSEN34	96	44.891	Notamacropus_eugenii
ENSXMAG00000024266	tsen34	93	38.608	ENSODEG00000000096	TSEN34	99	39.241	Octodon_degus
ENSXMAG00000024266	tsen34	95	75.458	ENSONIG00000017253	tsen34	100	75.458	Oreochromis_niloticus
ENSXMAG00000024266	tsen34	66	40.183	ENSOANG00000014747	-	95	41.553	Ornithorhynchus_anatinus
ENSXMAG00000024266	tsen34	100	67.832	ENSORLG00015012740	tsen34	100	68.182	Oryzias_latipes_hsok
ENSXMAG00000024266	tsen34	99	72.792	ENSOMEG00000016771	tsen34	96	72.792	Oryzias_melastigma
ENSXMAG00000024266	tsen34	93	39.935	ENSOGAG00000006966	TSEN34	99	40.260	Otolemur_garnettii
ENSXMAG00000024266	tsen34	93	40.909	ENSPPAG00000036935	TSEN34	99	40.909	Pan_paniscus
ENSXMAG00000024266	tsen34	93	40.584	ENSPPRG00000011779	TSEN34	99	40.584	Panthera_pardus
ENSXMAG00000024266	tsen34	93	40.260	ENSPTRG00000044768	-	99	40.260	Pan_troglodytes
ENSXMAG00000024266	tsen34	93	40.260	ENSPTRG00000011448	TSEN34	99	40.260	Pan_troglodytes
ENSXMAG00000024266	tsen34	93	40.260	ENSPANG00000012101	TSEN34	99	40.260	Papio_anubis
ENSXMAG00000024266	tsen34	95	56.000	ENSPKIG00000014674	tsen34	94	56.000	Paramormyrops_kingsleyae
ENSXMAG00000024266	tsen34	93	39.806	ENSPEMG00000014535	Tsen34	99	39.806	Peromyscus_maniculatus_bairdii
ENSXMAG00000024266	tsen34	100	92.657	ENSPFOG00000008679	tsen34	100	92.657	Poecilia_formosa
ENSXMAG00000024266	tsen34	100	93.706	ENSPLAG00000017309	tsen34	100	93.706	Poecilia_latipinna
ENSXMAG00000024266	tsen34	100	92.657	ENSPMEG00000005235	tsen34	100	92.657	Poecilia_mexicana
ENSXMAG00000024266	tsen34	99	85.965	ENSPREG00000021784	tsen34	99	85.965	Poecilia_reticulata
ENSXMAG00000024266	tsen34	93	39.935	ENSPPYG00000010376	TSEN34	94	39.935	Pongo_abelii
ENSXMAG00000024266	tsen34	93	39.286	ENSPCAG00000012359	TSEN34	99	39.286	Procavia_capensis
ENSXMAG00000024266	tsen34	93	39.935	ENSPCOG00000013843	TSEN34	99	40.260	Propithecus_coquereli
ENSXMAG00000024266	tsen34	93	40.461	ENSPVAG00000015570	TSEN34	99	40.461	Pteropus_vampyrus
ENSXMAG00000024266	tsen34	97	74.460	ENSPNYG00000024090	tsen34	75	74.460	Pundamilia_nyererei
ENSXMAG00000024266	tsen34	99	54.698	ENSPNAG00000028698	tsen34	90	54.698	Pygocentrus_nattereri
ENSXMAG00000024266	tsen34	93	39.677	ENSRNOG00000059572	Tsen34l1	99	39.032	Rattus_norvegicus
ENSXMAG00000024266	tsen34	93	39.677	ENSRNOG00000055179	Tsen34	99	39.032	Rattus_norvegicus
ENSXMAG00000024266	tsen34	93	40.260	ENSRBIG00000034430	TSEN34	99	40.260	Rhinopithecus_bieti
ENSXMAG00000024266	tsen34	93	40.260	ENSRROG00000024217	TSEN34	99	40.260	Rhinopithecus_roxellana
ENSXMAG00000024266	tsen34	89	38.538	ENSSBOG00000016017	TSEN34	96	39.322	Saimiri_boliviensis_boliviensis
ENSXMAG00000024266	tsen34	67	56.566	ENSSFOG00015017579	tsen34	82	56.566	Scleropages_formosus
ENSXMAG00000024266	tsen34	98	70.671	ENSSMAG00000005214	tsen34	99	70.671	Scophthalmus_maximus
ENSXMAG00000024266	tsen34	97	74.296	ENSSDUG00000005391	tsen34	95	74.126	Seriola_dumerili
ENSXMAG00000024266	tsen34	98	73.958	ENSSLDG00000006144	tsen34	92	73.958	Seriola_lalandi_dorsalis
ENSXMAG00000024266	tsen34	87	36.393	ENSSARG00000005857	TSEN34	79	36.393	Sorex_araneus
ENSXMAG00000024266	tsen34	94	41.096	ENSSPUG00000008447	TSEN34	99	41.096	Sphenodon_punctatus
ENSXMAG00000024266	tsen34	99	75.265	ENSSPAG00000010512	tsen34	97	74.912	Stegastes_partitus
ENSXMAG00000024266	tsen34	93	40.129	ENSSSCG00000003268	TSEN34	99	41.424	Sus_scrofa
ENSXMAG00000024266	tsen34	95	61.029	ENSTRUG00000000787	tsen34	90	61.255	Takifugu_rubripes
ENSXMAG00000024266	tsen34	94	67.230	ENSTNIG00000011201	tsen34	99	66.892	Tetraodon_nigroviridis
ENSXMAG00000024266	tsen34	94	66.667	ENSTNIG00000001937	-	99	68.166	Tetraodon_nigroviridis
ENSXMAG00000024266	tsen34	93	38.636	ENSTTRG00000006571	TSEN34	99	39.159	Tursiops_truncatus
ENSXMAG00000024266	tsen34	93	38.636	ENSUAMG00000008701	TSEN34	99	39.286	Ursus_americanus
ENSXMAG00000024266	tsen34	93	38.636	ENSVVUG00000008211	TSEN34	99	38.636	Vulpes_vulpes
ENSXMAG00000024266	tsen34	94	41.333	ENSXETG00000004597	tsen34	99	41.667	Xenopus_tropicalis