EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000024520 (Gene tree)
Gene ID: 102237947
Gene Symbol: gpatch4
Alias: im:7138553|si:dkey-202i12.4
Full Name: G-patch domain containing 4
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 7884 bases
Position: chr3:12232347-12240230
Accession: 102237947
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000032665	G-patch	PF01585.23	6.1e-11	1	1
ENSXMAP00000037730	G-patch	PF01585.23	1.6e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000023543	-	2830	-	ENSXMAP00000032665	387 (aa)	-	-
ENSXMAT00000029140	-	5718	XM_023330139	ENSXMAP00000037730	383 (aa)	XP_023185907	UPI000C6D6767

Gene Model

Click here to download ENSXMAG00000024520's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000024520's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000024520	gpatch4	51	44.898	ENSG00000160818	GPATCH4	98	42.188	Homo_sapiens
ENSXMAG00000024520	gpatch4	66	69.173	ENSAPOG00000008436	gpatch4	98	56.642	Acanthochromis_polyacanthus
ENSXMAG00000024520	gpatch4	55	43.602	ENSAMEG00000014829	GPATCH4	50	41.304	Ailuropoda_melanoleuca
ENSXMAG00000024520	gpatch4	75	90.141	ENSAOCG00000015494	gpatch4	96	90.141	Amphiprion_ocellaris
ENSXMAG00000024520	gpatch4	97	60.305	ENSAPEG00000022243	gpatch4	98	58.987	Amphiprion_percula
ENSXMAG00000024520	gpatch4	56	81.106	ENSATEG00000006359	gpatch4	63	69.118	Anabas_testudineus
ENSXMAG00000024520	gpatch4	51	44.898	ENSANAG00000035354	GPATCH4	58	38.306	Aotus_nancymaae
ENSXMAG00000024520	gpatch4	66	74.016	ENSACLG00000010456	gpatch4	64	74.409	Astatotilapia_calliptera
ENSXMAG00000024520	gpatch4	53	44.059	ENSBTAG00000000406	GPATCH4	50	38.235	Bos_taurus
ENSXMAG00000024520	gpatch4	51	44.388	ENSCJAG00000006048	GPATCH4	91	41.803	Callithrix_jacchus
ENSXMAG00000024520	gpatch4	53	43.842	ENSCHIG00000021295	GPATCH4	52	37.860	Capra_hircus
ENSXMAG00000024520	gpatch4	56	43.256	ENSCCAG00000036114	GPATCH4	91	41.803	Cebus_capucinus
ENSXMAG00000024520	gpatch4	51	44.388	ENSCATG00000042152	GPATCH4	90	37.857	Cercocebus_atys
ENSXMAG00000024520	gpatch4	59	55.844	ENSCPBG00000025803	GPATCH4	74	56.652	Chrysemys_picta_bellii
ENSXMAG00000024520	gpatch4	51	45.408	ENSCANG00000030031	GPATCH4	78	42.623	Colobus_angolensis_palliatus
ENSXMAG00000024520	gpatch4	55	43.868	ENSCGRG00001016898	Gpatch4	53	41.277	Cricetulus_griseus_chok1gshd
ENSXMAG00000024520	gpatch4	55	43.868	ENSCGRG00000008399	Gpatch4	53	41.277	Cricetulus_griseus_crigri
ENSXMAG00000024520	gpatch4	57	65.438	ENSCSEG00000012030	gpatch4	61	64.977	Cynoglossus_semilaevis
ENSXMAG00000024520	gpatch4	55	74.408	ENSDARG00000091931	gpatch4	82	71.429	Danio_rerio
ENSXMAG00000024520	gpatch4	52	35.437	FBgn0039829	CG15561	65	33.195	Drosophila_melanogaster
ENSXMAG00000024520	gpatch4	66	40.551	ENSETEG00000000659	-	52	41.463	Echinops_telfairi
ENSXMAG00000024520	gpatch4	52	43.500	ENSEASG00005018284	GPATCH4	52	39.331	Equus_asinus_asinus
ENSXMAG00000024520	gpatch4	52	43.500	ENSECAG00000011135	GPATCH4	65	40.167	Equus_caballus
ENSXMAG00000024520	gpatch4	56	45.070	ENSEEUG00000003221	-	50	40.756	Erinaceus_europaeus
ENSXMAG00000024520	gpatch4	51	44.388	ENSFCAG00000006554	GPATCH4	62	40.329	Felis_catus
ENSXMAG00000024520	gpatch4	99	66.420	ENSFHEG00000003097	gpatch4	99	63.951	Fundulus_heteroclitus
ENSXMAG00000024520	gpatch4	53	53.431	ENSGALG00000048365	GPATCH4	65	48.963	Gallus_gallus
ENSXMAG00000024520	gpatch4	66	85.827	ENSGAFG00000021732	gpatch4	81	86.166	Gambusia_affinis
ENSXMAG00000024520	gpatch4	54	77.885	ENSGACG00000013318	gpatch4	62	76.923	Gasterosteus_aculeatus
ENSXMAG00000024520	gpatch4	55	59.809	ENSGAGG00000020710	GPATCH4	78	53.469	Gopherus_agassizii
ENSXMAG00000024520	gpatch4	67	40.769	ENSGGOG00000000753	GPATCH4	78	41.803	Gorilla_gorilla
ENSXMAG00000024520	gpatch4	66	74.803	ENSHBUG00000009675	gpatch4	64	75.197	Haplochromis_burtoni
ENSXMAG00000024520	gpatch4	63	61.066	ENSHCOG00000007016	gpatch4	65	61.066	Hippocampus_comes
ENSXMAG00000024520	gpatch4	54	74.038	ENSIPUG00000006348	gpatch4	70	63.470	Ictalurus_punctatus
ENSXMAG00000024520	gpatch4	56	43.662	ENSSTOG00000020510	GPATCH4	89	44.531	Ictidomys_tridecemlineatus
ENSXMAG00000024520	gpatch4	98	64.083	ENSKMAG00000015765	gpatch4	98	63.874	Kryptolebias_marmoratus
ENSXMAG00000024520	gpatch4	93	55.637	ENSLBEG00000016296	gpatch4	98	53.318	Labrus_bergylta
ENSXMAG00000024520	gpatch4	58	76.211	ENSLBEG00000009364	-	99	55.257	Labrus_bergylta
ENSXMAG00000024520	gpatch4	55	60.377	ENSLACG00000009700	GPATCH4	71	54.902	Latimeria_chalumnae
ENSXMAG00000024520	gpatch4	68	35.472	ENSLAFG00000028327	-	53	33.735	Loxodonta_africana
ENSXMAG00000024520	gpatch4	51	43.878	ENSMFAG00000030965	GPATCH4	90	37.143	Macaca_fascicularis
ENSXMAG00000024520	gpatch4	51	44.388	ENSMMUG00000002624	GPATCH4	90	37.857	Macaca_mulatta
ENSXMAG00000024520	gpatch4	51	44.388	ENSMNEG00000028844	GPATCH4	90	37.857	Macaca_nemestrina
ENSXMAG00000024520	gpatch4	51	44.388	ENSMLEG00000037909	GPATCH4	90	38.849	Mandrillus_leucophaeus
ENSXMAG00000024520	gpatch4	65	68.401	ENSMAMG00000010151	gpatch4	99	52.326	Mastacembelus_armatus
ENSXMAG00000024520	gpatch4	66	74.409	ENSMZEG00005017452	gpatch4	65	74.803	Maylandia_zebra
ENSXMAG00000024520	gpatch4	54	42.233	ENSMICG00000013624	GPATCH4	59	38.819	Microcebus_murinus
ENSXMAG00000024520	gpatch4	54	46.860	ENSMODG00000016818	-	80	43.725	Monodelphis_domestica
ENSXMAG00000024520	gpatch4	54	44.928	ENSMODG00000014154	-	94	44.928	Monodelphis_domestica
ENSXMAG00000024520	gpatch4	98	54.028	ENSMALG00000003793	gpatch4	98	53.349	Monopterus_albus
ENSXMAG00000024520	gpatch4	57	43.119	MGP_CAROLIEiJ_G0025152	Gpatch4	92	41.176	Mus_caroli
ENSXMAG00000024520	gpatch4	57	42.661	ENSMUSG00000028069	Gpatch4	92	40.756	Mus_musculus
ENSXMAG00000024520	gpatch4	57	43.119	MGP_PahariEiJ_G0026595	-	92	41.176	Mus_pahari
ENSXMAG00000024520	gpatch4	57	42.661	MGP_SPRETEiJ_G0026093	Gpatch4	92	40.756	Mus_spretus
ENSXMAG00000024520	gpatch4	51	43.367	ENSMLUG00000009571	GPATCH4	51	40.984	Myotis_lucifugus
ENSXMAG00000024520	gpatch4	52	44.221	ENSNLEG00000027678	GPATCH4	58	39.167	Nomascus_leucogenys
ENSXMAG00000024520	gpatch4	54	40.580	ENSMEUG00000006861	-	77	39.574	Notamacropus_eugenii
ENSXMAG00000024520	gpatch4	56	44.131	ENSOPRG00000000586	GPATCH4	52	39.024	Ochotona_princeps
ENSXMAG00000024520	gpatch4	66	73.828	ENSONIG00000002261	gpatch4	63	74.219	Oreochromis_niloticus
ENSXMAG00000024520	gpatch4	94	53.930	ENSORLG00020013892	gpatch4	95	54.124	Oryzias_latipes_hni
ENSXMAG00000024520	gpatch4	55	78.199	ENSORLG00015019725	gpatch4	95	53.627	Oryzias_latipes_hsok
ENSXMAG00000024520	gpatch4	56	56.944	ENSOMEG00000000529	gpatch4	95	42.820	Oryzias_melastigma
ENSXMAG00000024520	gpatch4	54	42.718	ENSOGAG00000006698	-	53	39.516	Otolemur_garnettii
ENSXMAG00000024520	gpatch4	53	43.842	ENSOARG00000006123	GPATCH4	52	37.860	Ovis_aries
ENSXMAG00000024520	gpatch4	53	44.059	ENSPPAG00000028364	-	78	41.803	Pan_paniscus
ENSXMAG00000024520	gpatch4	50	45.596	ENSPPRG00000002106	GPATCH4	62	40.329	Panthera_pardus
ENSXMAG00000024520	gpatch4	52	44.500	ENSPTIG00000006717	GPATCH4	88	40.580	Panthera_tigris_altaica
ENSXMAG00000024520	gpatch4	53	44.059	ENSPTRG00000001464	GPATCH4	78	41.803	Pan_troglodytes
ENSXMAG00000024520	gpatch4	51	44.388	ENSPANG00000018543	GPATCH4	90	37.857	Papio_anubis
ENSXMAG00000024520	gpatch4	56	59.346	ENSPSIG00000011317	GPATCH4	88	52.308	Pelodiscus_sinensis
ENSXMAG00000024520	gpatch4	54	56.398	ENSPMAG00000009175	gpatch4	69	56.436	Petromyzon_marinus
ENSXMAG00000024520	gpatch4	100	88.747	ENSPFOG00000011835	gpatch4	100	88.747	Poecilia_formosa
ENSXMAG00000024520	gpatch4	100	88.432	ENSPLAG00000019504	gpatch4	100	88.432	Poecilia_latipinna
ENSXMAG00000024520	gpatch4	100	89.691	ENSPMEG00000001375	gpatch4	100	89.433	Poecilia_mexicana
ENSXMAG00000024520	gpatch4	92	89.011	ENSPREG00000017029	gpatch4	98	88.462	Poecilia_reticulata
ENSXMAG00000024520	gpatch4	66	74.409	ENSPNYG00000018461	gpatch4	64	74.803	Pundamilia_nyererei
ENSXMAG00000024520	gpatch4	55	76.190	ENSPNAG00000012535	gpatch4	54	63.077	Pygocentrus_nattereri
ENSXMAG00000024520	gpatch4	57	42.661	ENSRNOG00000018969	Gpatch4	54	41.176	Rattus_norvegicus
ENSXMAG00000024520	gpatch4	51	44.388	ENSRBIG00000005742	GPATCH4	78	41.803	Rhinopithecus_bieti
ENSXMAG00000024520	gpatch4	51	44.388	ENSRROG00000044157	GPATCH4	78	41.803	Rhinopithecus_roxellana
ENSXMAG00000024520	gpatch4	54	43.961	ENSSHAG00000015436	-	81	41.532	Sarcophilus_harrisii
ENSXMAG00000024520	gpatch4	97	51.270	ENSSMAG00000016329	gpatch4	61	68.015	Scophthalmus_maximus
ENSXMAG00000024520	gpatch4	54	80.288	ENSSDUG00000006583	gpatch4	98	54.126	Seriola_dumerili
ENSXMAG00000024520	gpatch4	54	80.288	ENSSLDG00000012365	gpatch4	98	54.258	Seriola_lalandi_dorsalis
ENSXMAG00000024520	gpatch4	53	61.576	ENSSPUG00000002674	GPATCH4	66	61.576	Sphenodon_punctatus
ENSXMAG00000024520	gpatch4	66	70.412	ENSSPAG00000011683	gpatch4	98	59.045	Stegastes_partitus
ENSXMAG00000024520	gpatch4	56	43.192	ENSSSCG00000006481	GPATCH4	51	41.079	Sus_scrofa
ENSXMAG00000024520	gpatch4	55	70.968	ENSTNIG00000005156	gpatch4	83	65.182	Tetraodon_nigroviridis
ENSXMAG00000024520	gpatch4	53	41.379	ENSTTRG00000001113	GPATCH4	56	38.776	Tursiops_truncatus
ENSXMAG00000024520	gpatch4	56	39.256	ENSVVUG00000006004	-	82	44.262	Vulpes_vulpes
ENSXMAG00000024520	gpatch4	64	56.275	ENSXETG00000020397	gpatch4	80	56.275	Xenopus_tropicalis
ENSXMAG00000024520	gpatch4	100	92.428	ENSXCOG00000003911	gpatch4	100	92.428	Xiphophorus_couchianus