EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000024530 (Gene tree)
Gene ID: 102235564
Gene Symbol: -
Alias: -
Full Name: poly(rC)-binding protein 4-like
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 44088 bases
Position: chr1:19571811-19615898
Accession: 102235564
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000035146	KH_1	PF00013.29	1.1e-50	1	3
ENSXMAP00000035146	KH_1	PF00013.29	1.1e-50	2	3
ENSXMAP00000035146	KH_1	PF00013.29	1.1e-50	3	3
ENSXMAP00000035146	KH_2	PF07650.17	3.3e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000027943	-	3973	XM_005801675	ENSXMAP00000035146	457 (aa)	XP_005801732	UPI000C6D5A04

Gene Model

Click here to download ENSXMAG00000024530's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000024530's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000024530	-	96	57.143	ENSG00000090097	PCBP4	97	74.233	Homo_sapiens
ENSXMAG00000024530	-	100	94.967	ENSAPOG00000009897	-	100	94.967	Acanthochromis_polyacanthus
ENSXMAG00000024530	-	95	57.859	ENSAMEG00000009211	PCBP4	97	58.314	Ailuropoda_melanoleuca
ENSXMAG00000024530	-	90	95.157	ENSACIG00000020434	-	100	95.157	Amphilophus_citrinellus
ENSXMAG00000024530	-	88	71.801	ENSACIG00000015264	pcbp4	89	72.749	Amphilophus_citrinellus
ENSXMAG00000024530	-	94	63.427	ENSAOCG00000006924	-	100	63.171	Amphiprion_ocellaris
ENSXMAG00000024530	-	98	91.256	ENSAOCG00000021366	-	100	91.256	Amphiprion_ocellaris
ENSXMAG00000024530	-	89	74.641	ENSAPEG00000023157	pcbp4	100	75.359	Amphiprion_percula
ENSXMAG00000024530	-	88	65.602	ENSAPEG00000009555	-	74	88.265	Amphiprion_percula
ENSXMAG00000024530	-	98	89.556	ENSATEG00000006511	-	100	89.556	Anabas_testudineus
ENSXMAG00000024530	-	89	67.070	ENSATEG00000008529	pcbp4	93	67.718	Anabas_testudineus
ENSXMAG00000024530	-	95	62.557	ENSACAG00000011701	PCBP4	97	62.557	Anolis_carolinensis
ENSXMAG00000024530	-	96	57.143	ENSANAG00000023072	PCBP4	99	57.589	Aotus_nancymaae
ENSXMAG00000024530	-	100	70.378	ENSACLG00000013348	pcbp4	100	69.980	Astatotilapia_calliptera
ENSXMAG00000024530	-	100	94.530	ENSACLG00000025246	-	100	94.530	Astatotilapia_calliptera
ENSXMAG00000024530	-	100	81.330	ENSAMXG00000033125	pcbp4	100	80.687	Astyanax_mexicanus
ENSXMAG00000024530	-	95	57.859	ENSBTAG00000018622	PCBP4	97	58.314	Bos_taurus
ENSXMAG00000024530	-	96	57.366	ENSCJAG00000005783	PCBP4	99	57.812	Callithrix_jacchus
ENSXMAG00000024530	-	95	57.859	ENSCAFG00000010019	PCBP4	97	58.314	Canis_familiaris
ENSXMAG00000024530	-	95	57.859	ENSCAFG00020022361	PCBP4	97	58.314	Canis_lupus_dingo
ENSXMAG00000024530	-	95	58.087	ENSCHIG00000012918	PCBP4	97	58.314	Capra_hircus
ENSXMAG00000024530	-	95	57.859	ENSTSYG00000008765	PCBP4	97	58.314	Carlito_syrichta
ENSXMAG00000024530	-	95	57.631	ENSCAPG00000005895	PCBP4	97	57.859	Cavia_aperea
ENSXMAG00000024530	-	95	57.631	ENSCPOG00000014617	PCBP4	97	58.087	Cavia_porcellus
ENSXMAG00000024530	-	96	57.366	ENSCCAG00000033268	PCBP4	99	57.812	Cebus_capucinus
ENSXMAG00000024530	-	96	57.366	ENSCATG00000032034	PCBP4	99	57.812	Cercocebus_atys
ENSXMAG00000024530	-	95	57.631	ENSCLAG00000008356	PCBP4	97	58.087	Chinchilla_lanigera
ENSXMAG00000024530	-	96	57.366	ENSCSAG00000013913	PCBP4	99	57.812	Chlorocebus_sabaeus
ENSXMAG00000024530	-	95	62.329	ENSCPBG00000016554	PCBP4	95	61.872	Chrysemys_picta_bellii
ENSXMAG00000024530	-	96	57.366	ENSCANG00000038865	PCBP4	99	57.812	Colobus_angolensis_palliatus
ENSXMAG00000024530	-	95	57.859	ENSCGRG00001014953	Pcbp4	97	58.314	Cricetulus_griseus_chok1gshd
ENSXMAG00000024530	-	95	57.859	ENSCGRG00000008617	Pcbp4	97	58.314	Cricetulus_griseus_crigri
ENSXMAG00000024530	-	98	69.456	ENSCSEG00000014487	pcbp4	95	70.084	Cynoglossus_semilaevis
ENSXMAG00000024530	-	98	83.036	ENSCSEG00000021041	PCBP4	100	82.812	Cynoglossus_semilaevis
ENSXMAG00000024530	-	91	65.967	ENSCVAG00000003674	pcbp4	98	66.200	Cyprinodon_variegatus
ENSXMAG00000024530	-	100	96.937	ENSCVAG00000013090	-	100	96.937	Cyprinodon_variegatus
ENSXMAG00000024530	-	100	80.430	ENSDARG00000024276	pcbp4	100	80.587	Danio_rerio
ENSXMAG00000024530	-	92	77.778	ENSDNOG00000033951	PCBP4	87	71.084	Dasypus_novemcinctus
ENSXMAG00000024530	-	95	57.175	ENSDORG00000000573	Pcbp4	97	57.859	Dipodomys_ordii
ENSXMAG00000024530	-	63	56.410	ENSETEG00000001778	PCBP4	96	56.410	Echinops_telfairi
ENSXMAG00000024530	-	95	57.631	ENSEASG00005012889	PCBP4	97	58.087	Equus_asinus_asinus
ENSXMAG00000024530	-	95	57.631	ENSECAG00000024218	PCBP4	97	58.087	Equus_caballus
ENSXMAG00000024530	-	100	74.895	ENSELUG00000018204	pcbp4	100	74.947	Esox_lucius
ENSXMAG00000024530	-	100	85.529	ENSELUG00000001870	-	100	85.529	Esox_lucius
ENSXMAG00000024530	-	95	57.859	ENSFCAG00000009148	PCBP4	97	58.314	Felis_catus
ENSXMAG00000024530	-	93	58.372	ENSFALG00000008831	PCBP4	95	58.605	Ficedula_albicollis
ENSXMAG00000024530	-	95	57.631	ENSFDAG00000012692	PCBP4	97	58.087	Fukomys_damarensis
ENSXMAG00000024530	-	88	69.779	ENSFHEG00000002769	-	97	69.779	Fundulus_heteroclitus
ENSXMAG00000024530	-	98	86.384	ENSGMOG00000017799	-	100	85.491	Gadus_morhua
ENSXMAG00000024530	-	95	58.219	ENSGALG00000027695	PCBP4	97	58.676	Gallus_gallus
ENSXMAG00000024530	-	83	97.090	ENSGAFG00000021090	-	81	97.090	Gambusia_affinis
ENSXMAG00000024530	-	55	88.000	ENSGAFG00000018301	pcbp4	63	88.000	Gambusia_affinis
ENSXMAG00000024530	-	98	89.286	ENSGACG00000002664	-	100	89.955	Gasterosteus_aculeatus
ENSXMAG00000024530	-	95	62.100	ENSGAGG00000022116	PCBP4	95	62.100	Gopherus_agassizii
ENSXMAG00000024530	-	96	57.143	ENSGGOG00000012474	PCBP4	99	57.589	Gorilla_gorilla
ENSXMAG00000024530	-	100	94.311	ENSHBUG00000005329	-	100	94.311	Haplochromis_burtoni
ENSXMAG00000024530	-	100	70.378	ENSHBUG00000009472	pcbp4	100	69.980	Haplochromis_burtoni
ENSXMAG00000024530	-	95	57.859	ENSHGLG00000012018	PCBP4	97	58.314	Heterocephalus_glaber_female
ENSXMAG00000024530	-	95	56.335	ENSHGLG00100008748	PCBP4	97	56.561	Heterocephalus_glaber_male
ENSXMAG00000024530	-	100	86.681	ENSHCOG00000010838	-	100	86.681	Hippocampus_comes
ENSXMAG00000024530	-	100	82.174	ENSIPUG00000008212	pcbp4	100	82.174	Ictalurus_punctatus
ENSXMAG00000024530	-	95	56.036	ENSSTOG00000002573	PCBP4	97	56.492	Ictidomys_tridecemlineatus
ENSXMAG00000024530	-	95	57.859	ENSJJAG00000016235	Pcbp4	97	58.314	Jaculus_jaculus
ENSXMAG00000024530	-	98	73.504	ENSKMAG00000014252	pcbp4	96	73.718	Kryptolebias_marmoratus
ENSXMAG00000024530	-	100	94.530	ENSKMAG00000017554	-	100	94.530	Kryptolebias_marmoratus
ENSXMAG00000024530	-	100	93.217	ENSLBEG00000011345	-	100	93.217	Labrus_bergylta
ENSXMAG00000024530	-	100	65.217	ENSLACG00000015899	PCBP4	98	72.414	Latimeria_chalumnae
ENSXMAG00000024530	-	100	79.085	ENSLOCG00000013402	pcbp4	100	79.303	Lepisosteus_oculatus
ENSXMAG00000024530	-	88	55.037	ENSLAFG00000010732	PCBP4	100	55.528	Loxodonta_africana
ENSXMAG00000024530	-	96	57.366	ENSMFAG00000001431	PCBP4	99	57.812	Macaca_fascicularis
ENSXMAG00000024530	-	96	57.366	ENSMMUG00000022205	PCBP4	94	63.030	Macaca_mulatta
ENSXMAG00000024530	-	96	57.366	ENSMNEG00000028553	PCBP4	99	57.812	Macaca_nemestrina
ENSXMAG00000024530	-	96	57.366	ENSMLEG00000027083	PCBP4	99	57.812	Mandrillus_leucophaeus
ENSXMAG00000024530	-	100	69.860	ENSMAMG00000010163	pcbp4	100	70.259	Mastacembelus_armatus
ENSXMAG00000024530	-	100	94.530	ENSMAMG00000011364	-	100	94.530	Mastacembelus_armatus
ENSXMAG00000024530	-	100	70.378	ENSMZEG00005008852	pcbp4	100	69.980	Maylandia_zebra
ENSXMAG00000024530	-	100	94.530	ENSMZEG00005023631	-	100	94.530	Maylandia_zebra
ENSXMAG00000024530	-	64	54.884	ENSMGAG00000003895	-	99	53.953	Meleagris_gallopavo
ENSXMAG00000024530	-	53	72.581	ENSMGAG00000005091	-	85	72.581	Meleagris_gallopavo
ENSXMAG00000024530	-	95	57.859	ENSMAUG00000021064	Pcbp4	97	58.314	Mesocricetus_auratus
ENSXMAG00000024530	-	95	57.859	ENSMICG00000002686	PCBP4	97	58.314	Microcebus_murinus
ENSXMAG00000024530	-	95	58.314	ENSMOCG00000013557	Pcbp4	97	58.770	Microtus_ochrogaster
ENSXMAG00000024530	-	69	62.025	ENSMMOG00000017756	pcbp4	97	62.025	Mola_mola
ENSXMAG00000024530	-	98	89.013	ENSMMOG00000020533	-	100	89.013	Mola_mola
ENSXMAG00000024530	-	95	58.352	ENSMODG00000011790	PCBP4	82	58.352	Monodelphis_domestica
ENSXMAG00000024530	-	91	74.194	ENSMALG00000020318	pcbp4	91	75.694	Monopterus_albus
ENSXMAG00000024530	-	94	96.226	ENSMALG00000022117	-	100	96.226	Monopterus_albus
ENSXMAG00000024530	-	95	57.859	MGP_CAROLIEiJ_G0032623	Pcbp4	93	75.000	Mus_caroli
ENSXMAG00000024530	-	95	57.859	ENSMUSG00000023495	Pcbp4	91	80.000	Mus_musculus
ENSXMAG00000024530	-	95	57.859	MGP_PahariEiJ_G0015491	Pcbp4	93	75.000	Mus_pahari
ENSXMAG00000024530	-	95	57.859	MGP_SPRETEiJ_G0033768	-	93	75.000	Mus_spretus
ENSXMAG00000024530	-	95	57.859	ENSMPUG00000011766	PCBP4	97	58.314	Mustela_putorius_furo
ENSXMAG00000024530	-	95	57.859	ENSNGAG00000013148	Pcbp4	97	58.314	Nannospalax_galili
ENSXMAG00000024530	-	94	61.830	ENSNBRG00000007475	pcbp4	98	61.384	Neolamprologus_brichardi
ENSXMAG00000024530	-	98	90.807	ENSNBRG00000015885	-	100	90.807	Neolamprologus_brichardi
ENSXMAG00000024530	-	96	57.366	ENSNLEG00000007064	PCBP4	99	57.812	Nomascus_leucogenys
ENSXMAG00000024530	-	88	48.775	ENSMEUG00000006917	PCBP4	95	48.775	Notamacropus_eugenii
ENSXMAG00000024530	-	88	50.787	ENSOPRG00000008763	PCBP4	98	50.670	Ochotona_princeps
ENSXMAG00000024530	-	95	57.631	ENSODEG00000018230	PCBP4	97	58.087	Octodon_degus
ENSXMAG00000024530	-	95	57.798	ENSOANG00000014110	PCBP4	94	57.798	Ornithorhynchus_anatinus
ENSXMAG00000024530	-	95	58.087	ENSOCUG00000025336	PCBP4	97	58.314	Oryctolagus_cuniculus
ENSXMAG00000024530	-	98	89.933	ENSORLG00000009899	-	100	89.933	Oryzias_latipes
ENSXMAG00000024530	-	98	70.316	ENSORLG00000003061	pcbp4	96	71.158	Oryzias_latipes
ENSXMAG00000024530	-	100	93.873	ENSORLG00020001183	-	100	93.873	Oryzias_latipes_hni
ENSXMAG00000024530	-	98	69.311	ENSORLG00015019262	pcbp4	96	69.937	Oryzias_latipes_hsok
ENSXMAG00000024530	-	100	94.311	ENSORLG00015017819	-	100	94.311	Oryzias_latipes_hsok
ENSXMAG00000024530	-	98	68.443	ENSOMEG00000003516	-	96	69.296	Oryzias_melastigma
ENSXMAG00000024530	-	100	94.311	ENSOMEG00000011545	-	100	94.311	Oryzias_melastigma
ENSXMAG00000024530	-	95	57.631	ENSOGAG00000032384	PCBP4	97	58.087	Otolemur_garnettii
ENSXMAG00000024530	-	90	56.145	ENSOARG00000006603	PCBP4	100	56.627	Ovis_aries
ENSXMAG00000024530	-	96	57.143	ENSPPAG00000038764	PCBP4	99	57.589	Pan_paniscus
ENSXMAG00000024530	-	95	57.859	ENSPPRG00000006165	PCBP4	97	58.314	Panthera_pardus
ENSXMAG00000024530	-	95	57.859	ENSPTIG00000005401	PCBP4	93	58.314	Panthera_tigris_altaica
ENSXMAG00000024530	-	96	57.143	ENSPTRG00000014983	PCBP4	99	57.589	Pan_troglodytes
ENSXMAG00000024530	-	96	57.366	ENSPANG00000026222	PCBP4	99	57.812	Papio_anubis
ENSXMAG00000024530	-	100	74.017	ENSPKIG00000005487	-	100	73.581	Paramormyrops_kingsleyae
ENSXMAG00000024530	-	100	81.659	ENSPKIG00000010244	pcbp4	100	81.441	Paramormyrops_kingsleyae
ENSXMAG00000024530	-	79	58.266	ENSPSIG00000011286	PCBP4	96	58.266	Pelodiscus_sinensis
ENSXMAG00000024530	-	94	72.922	ENSPMGG00000000063	pcbp4	99	72.684	Periophthalmus_magnuspinnatus
ENSXMAG00000024530	-	98	82.550	ENSPMGG00000022732	-	100	81.208	Periophthalmus_magnuspinnatus
ENSXMAG00000024530	-	95	57.859	ENSPEMG00000009276	Pcbp4	97	58.314	Peromyscus_maniculatus_bairdii
ENSXMAG00000024530	-	95	59.039	ENSPCIG00000018151	PCBP4	93	59.039	Phascolarctos_cinereus
ENSXMAG00000024530	-	100	99.125	ENSPFOG00000002989	-	100	99.125	Poecilia_formosa
ENSXMAG00000024530	-	95	70.089	ENSPFOG00000014474	pcbp4	96	81.423	Poecilia_formosa
ENSXMAG00000024530	-	79	96.089	ENSPLAG00000011438	-	98	96.089	Poecilia_latipinna
ENSXMAG00000024530	-	80	67.885	ENSPLAG00000023316	pcbp4	89	69.974	Poecilia_latipinna
ENSXMAG00000024530	-	60	59.044	ENSPMEG00000012990	pcbp4	100	61.409	Poecilia_mexicana
ENSXMAG00000024530	-	98	89.686	ENSPREG00000017370	-	100	89.686	Poecilia_reticulata
ENSXMAG00000024530	-	69	57.679	ENSPREG00000021498	-	81	57.679	Poecilia_reticulata
ENSXMAG00000024530	-	96	57.366	ENSPPYG00000013822	PCBP4	99	57.812	Pongo_abelii
ENSXMAG00000024530	-	88	52.064	ENSPCAG00000009515	PCBP4	97	52.294	Procavia_capensis
ENSXMAG00000024530	-	95	57.859	ENSPCOG00000027535	PCBP4	97	58.314	Propithecus_coquereli
ENSXMAG00000024530	-	88	49.127	ENSPVAG00000012474	PCBP4	97	49.342	Pteropus_vampyrus
ENSXMAG00000024530	-	92	70.495	ENSPNYG00000019234	pcbp4	100	70.045	Pundamilia_nyererei
ENSXMAG00000024530	-	98	90.359	ENSPNYG00000003098	-	100	90.359	Pundamilia_nyererei
ENSXMAG00000024530	-	100	81.935	ENSPNAG00000025434	pcbp4	100	81.720	Pygocentrus_nattereri
ENSXMAG00000024530	-	95	57.859	ENSRNOG00000012406	Pcbp4	97	58.314	Rattus_norvegicus
ENSXMAG00000024530	-	96	57.366	ENSRBIG00000043793	PCBP4	99	57.812	Rhinopithecus_bieti
ENSXMAG00000024530	-	96	57.366	ENSRROG00000034589	PCBP4	99	57.812	Rhinopithecus_roxellana
ENSXMAG00000024530	-	96	57.366	ENSSBOG00000027029	PCBP4	99	57.812	Saimiri_boliviensis_boliviensis
ENSXMAG00000024530	-	69	59.387	ENSSHAG00000007362	PCBP4	100	59.387	Sarcophilus_harrisii
ENSXMAG00000024530	-	67	81.107	ENSSFOG00015008221	pcbp4	60	81.107	Scleropages_formosus
ENSXMAG00000024530	-	100	73.913	ENSSFOG00015012075	PCBP4	100	73.478	Scleropages_formosus
ENSXMAG00000024530	-	100	93.450	ENSSMAG00000009392	-	99	93.450	Scophthalmus_maximus
ENSXMAG00000024530	-	98	73.684	ENSSMAG00000005827	pcbp4	100	71.514	Scophthalmus_maximus
ENSXMAG00000024530	-	98	91.480	ENSSDUG00000015540	-	100	91.480	Seriola_dumerili
ENSXMAG00000024530	-	89	74.458	ENSSDUG00000017719	pcbp4	97	75.181	Seriola_dumerili
ENSXMAG00000024530	-	98	91.480	ENSSLDG00000007851	-	100	91.480	Seriola_lalandi_dorsalis
ENSXMAG00000024530	-	51	85.621	ENSSLDG00000024847	-	77	85.621	Seriola_lalandi_dorsalis
ENSXMAG00000024530	-	95	56.782	ENSSPUG00000000194	PCBP4	97	56.322	Sphenodon_punctatus
ENSXMAG00000024530	-	100	95.186	ENSSPAG00000003033	-	100	95.186	Stegastes_partitus
ENSXMAG00000024530	-	94	62.694	ENSSPAG00000019058	-	92	63.212	Stegastes_partitus
ENSXMAG00000024530	-	95	57.859	ENSSSCG00000028446	PCBP4	97	58.314	Sus_scrofa
ENSXMAG00000024530	-	70	57.585	ENSTGUG00000006393	PCBP4	96	58.025	Taeniopygia_guttata
ENSXMAG00000024530	-	98	88.117	ENSTRUG00000007426	-	100	88.117	Takifugu_rubripes
ENSXMAG00000024530	-	98	84.753	ENSTNIG00000017887	-	99	83.857	Tetraodon_nigroviridis
ENSXMAG00000024530	-	79	39.409	ENSTBEG00000015770	PCBP4	100	39.655	Tupaia_belangeri
ENSXMAG00000024530	-	69	53.403	ENSTTRG00000001443	PCBP4	83	53.927	Tursiops_truncatus
ENSXMAG00000024530	-	96	49.330	ENSUAMG00000020871	PCBP4	100	54.960	Ursus_americanus
ENSXMAG00000024530	-	86	59.406	ENSUMAG00000021609	PCBP4	90	59.606	Ursus_maritimus
ENSXMAG00000024530	-	95	57.859	ENSVVUG00000026857	PCBP4	97	58.314	Vulpes_vulpes
ENSXMAG00000024530	-	55	87.333	ENSXCOG00000017325	pcbp4	63	87.333	Xiphophorus_couchianus
ENSXMAG00000024530	-	94	88.949	ENSXCOG00000000111	-	100	88.949	Xiphophorus_couchianus
ENSXMAG00000024530	-	78	81.894	ENSXMAG00000015709	pcbp4	77	80.759	Xiphophorus_maculatus
ENSXMAG00000024530	-	84	65.517	ENSXMAG00000022188	-	90	67.241	Xiphophorus_maculatus