EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000024762 (Gene tree)
Gene ID: 102234513
Gene Symbol: -
Alias: -
Full Name: zinc finger protein 11-like
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 7334 bases
Position: chr17:9500726-9508059
Accession: 102234513
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000034583	zf-C2H2	PF00096.26	3e-67	1	10
ENSXMAP00000034583	zf-C2H2	PF00096.26	3e-67	2	10
ENSXMAP00000034583	zf-C2H2	PF00096.26	3e-67	3	10
ENSXMAP00000034583	zf-C2H2	PF00096.26	3e-67	4	10
ENSXMAP00000034583	zf-C2H2	PF00096.26	3e-67	5	10
ENSXMAP00000034583	zf-C2H2	PF00096.26	3e-67	6	10
ENSXMAP00000034583	zf-C2H2	PF00096.26	3e-67	7	10
ENSXMAP00000034583	zf-C2H2	PF00096.26	3e-67	8	10
ENSXMAP00000034583	zf-C2H2	PF00096.26	3e-67	9	10
ENSXMAP00000034583	zf-C2H2	PF00096.26	3e-67	10	10
ENSXMAP00000022325	zf-C2H2	PF00096.26	2.1e-36	1	6
ENSXMAP00000022325	zf-C2H2	PF00096.26	2.1e-36	2	6
ENSXMAP00000022325	zf-C2H2	PF00096.26	2.1e-36	3	6
ENSXMAP00000022325	zf-C2H2	PF00096.26	2.1e-36	4	6
ENSXMAP00000022325	zf-C2H2	PF00096.26	2.1e-36	5	6
ENSXMAP00000022325	zf-C2H2	PF00096.26	2.1e-36	6	6
ENSXMAP00000034583	zf-met	PF12874.7	9.3e-11	1	3
ENSXMAP00000034583	zf-met	PF12874.7	9.3e-11	2	3
ENSXMAP00000034583	zf-met	PF12874.7	9.3e-11	3	3
ENSXMAP00000022325	zf-met	PF12874.7	0.00055	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000036643	-	4293	XM_023350626	ENSXMAP00000034583	1087 (aa)	XP_023206394	UPI0003B40FEC
ENSXMAT00000022110	-	2307	-	ENSXMAP00000022325	768 (aa)	-	-

Gene Model

Click here to download ENSXMAG00000024762's gene model file

Pathways

Pathway ID	Pathway Name	Source
xma05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000024762's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000024762	-	99	61.006	ENSAPOG00000003028	-	100	60.757	Acanthochromis_polyacanthus
ENSXMAG00000024762	-	98	60.584	ENSATEG00000023044	-	99	60.885	Anabas_testudineus
ENSXMAG00000024762	-	100	60.769	ENSACLG00000016841	-	100	60.679	Astatotilapia_calliptera
ENSXMAG00000024762	-	99	61.308	ENSCSEG00000004721	-	99	61.308	Cynoglossus_semilaevis
ENSXMAG00000024762	-	99	60.955	ENSFHEG00000003583	-	99	60.955	Fundulus_heteroclitus
ENSXMAG00000024762	-	97	33.142	ENSKMAG00000003402	-	98	37.669	Kryptolebias_marmoratus
ENSXMAG00000024762	-	100	61.056	ENSMAMG00000015670	-	100	61.056	Mastacembelus_armatus
ENSXMAG00000024762	-	100	60.858	ENSMZEG00005001313	-	99	61.853	Maylandia_zebra
ENSXMAG00000024762	-	75	31.828	ENSMMOG00000020682	-	86	30.595	Mola_mola
ENSXMAG00000024762	-	97	55.311	ENSMALG00000011860	-	100	45.418	Monopterus_albus
ENSXMAG00000024762	-	84	56.136	ENSNBRG00000010987	-	100	56.136	Neolamprologus_brichardi
ENSXMAG00000024762	-	68	57.420	ENSONIG00000017799	-	100	57.420	Oreochromis_niloticus
ENSXMAG00000024762	-	100	60.054	ENSORLG00000027418	-	100	60.054	Oryzias_latipes
ENSXMAG00000024762	-	97	59.222	ENSORLG00020008744	-	99	60.763	Oryzias_latipes_hni
ENSXMAG00000024762	-	100	59.784	ENSORLG00015007973	-	100	59.784	Oryzias_latipes_hsok
ENSXMAG00000024762	-	100	60.181	ENSOMEG00000003451	-	99	62.125	Oryzias_melastigma
ENSXMAG00000024762	-	98	61.690	ENSPREG00000007135	-	99	60.383	Poecilia_reticulata
ENSXMAG00000024762	-	99	60.036	ENSSMAG00000005081	-	99	62.751	Scophthalmus_maximus
ENSXMAG00000024762	-	98	32.353	ENSSMAG00000002031	-	98	38.482	Scophthalmus_maximus
ENSXMAG00000024762	-	100	60.609	ENSSDUG00000016734	-	100	60.609	Seriola_dumerili
ENSXMAG00000024762	-	100	60.609	ENSSLDG00000004485	-	100	60.609	Seriola_lalandi_dorsalis
ENSXMAG00000024762	-	100	62.411	ENSSPAG00000003796	-	100	62.411	Stegastes_partitus
ENSXMAG00000024762	-	100	58.723	ENSTRUG00000025881	-	100	58.723	Takifugu_rubripes