EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000024816 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 6373 bases
Position: chr10:16596900-16603272
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000037704	zf-C2H2	PF00096.26	2.4e-22	1	4
ENSXMAP00000037704	zf-C2H2	PF00096.26	2.4e-22	2	4
ENSXMAP00000037704	zf-C2H2	PF00096.26	2.4e-22	3	4
ENSXMAP00000037704	zf-C2H2	PF00096.26	2.4e-22	4	4
ENSXMAP00000037704	zf-met	PF12874.7	6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000027642	-	1107	-	ENSXMAP00000037704	368 (aa)	-	-

Gene Model

Click here to download ENSXMAG00000024816's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000024816's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000024816	-	52	42.282	ENSDARG00000105137	zgc:173705	74	42.282	Danio_rerio
ENSXMAG00000024816	-	53	42.029	ENSDARG00000116177	znf1127	81	42.029	Danio_rerio
ENSXMAG00000024816	-	55	43.210	ENSDARG00000091477	znf1066	87	43.210	Danio_rerio
ENSXMAG00000024816	-	52	42.953	ENSDARG00000109381	CU457778.2	99	42.953	Danio_rerio
ENSXMAG00000024816	-	53	43.357	ENSDARG00000100001	znf1096	77	43.357	Danio_rerio
ENSXMAG00000024816	-	55	42.029	ENSDARG00000116920	BX465848.2	78	42.029	Danio_rerio
ENSXMAG00000024816	-	52	42.953	ENSDARG00000096189	si:dkey-54j5.2	99	42.953	Danio_rerio
ENSXMAG00000024816	-	50	37.245	ENSDARG00000102561	AL645691.1	68	37.912	Danio_rerio
ENSXMAG00000024816	-	83	43.624	ENSDARG00000112725	si:dkey-22h13.2	74	43.624	Danio_rerio
ENSXMAG00000024816	-	52	37.895	ENSDARG00000114437	zgc:173705	72	37.895	Danio_rerio
ENSXMAG00000024816	-	81	37.912	ENSDARG00000098986	znf1040	97	37.912	Danio_rerio
ENSXMAG00000024816	-	50	36.735	ENSDARG00000102008	si:dkey-72l17.6	70	38.462	Danio_rerio
ENSXMAG00000024816	-	54	41.436	ENSDARG00000103244	CABZ01081752.3	85	41.436	Danio_rerio
ENSXMAG00000024816	-	52	45.652	ENSDARG00000075417	zgc:175107	73	45.652	Danio_rerio
ENSXMAG00000024816	-	50	41.899	ENSDARG00000089715	si:cabz01054394.7	65	41.899	Danio_rerio
ENSXMAG00000024816	-	52	42.953	ENSDARG00000115450	CABZ01012382.1	99	42.953	Danio_rerio
ENSXMAG00000024816	-	52	38.202	ENSDARG00000091393	si:ch211-161m3.6	67	38.202	Danio_rerio
ENSXMAG00000024816	-	81	39.698	ENSDARG00000104407	BX649453.1	98	39.698	Danio_rerio
ENSXMAG00000024816	-	93	32.320	ENSFHEG00000001395	-	80	31.148	Fundulus_heteroclitus
ENSXMAG00000024816	-	95	39.860	ENSKMAG00000011441	-	90	39.860	Kryptolebias_marmoratus
ENSXMAG00000024816	-	54	37.640	ENSKMAG00000014002	si:ch211-79k12.2	79	37.640	Kryptolebias_marmoratus
ENSXMAG00000024816	-	89	38.462	ENSORLG00000012434	znf1064	83	31.045	Oryzias_latipes
ENSXMAG00000024816	-	52	40.714	ENSOMEG00000005928	-	51	40.714	Oryzias_melastigma
ENSXMAG00000024816	-	86	36.559	ENSPFOG00000022423	-	92	36.957	Poecilia_formosa
ENSXMAG00000024816	-	93	39.378	ENSPFOG00000003366	-	95	39.378	Poecilia_formosa
ENSXMAG00000024816	-	93	39.877	ENSPREG00000005015	-	96	40.476	Poecilia_reticulata
ENSXMAG00000024816	-	85	37.500	ENSXETG00000031310	-	92	37.500	Xenopus_tropicalis
ENSXMAG00000024816	-	96	54.703	ENSXCOG00000008908	-	80	54.703	Xiphophorus_couchianus
ENSXMAG00000024816	-	93	35.040	ENSXCOG00000003499	-	93	35.580	Xiphophorus_couchianus