EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000024840 (Gene tree)
Gene ID: 102218510
Gene Symbol: -
Alias: zgc:92772
Full Name: ras-related protein Rab-11B-like
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 9547 bases
Position: chr9:20698512-20708058
Accession: 102218510
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000011960	MMR_HSR1	PF01926.23	3.1e-07	1	1
ENSXMAP00000039862	MMR_HSR1	PF01926.23	3.5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000011976	-	624	-	ENSXMAP00000011960	207 (aa)	-	M4ABW6
ENSXMAT00000032064	-	5718	XM_005795578	ENSXMAP00000039862	218 (aa)	XP_005795635	UPI0003B3DE18

Gene Model

Click here to download ENSXMAG00000024840's gene model file

Pathways

Pathway ID	Pathway Name	Source
xma04144	Endocytosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000024840's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000024840	-	100	97.248	ENSAPOG00000023455	rab11bb	100	97.248	Acanthochromis_polyacanthus
ENSXMAG00000024840	-	100	99.541	ENSACIG00000024376	-	100	99.541	Amphilophus_citrinellus
ENSXMAG00000024840	-	100	85.321	ENSACIG00000019631	rab11bb	100	85.321	Amphilophus_citrinellus
ENSXMAG00000024840	-	100	99.541	ENSAOCG00000018849	-	100	99.541	Amphiprion_ocellaris
ENSXMAG00000024840	-	100	97.248	ENSAOCG00000018239	rab11bb	100	97.248	Amphiprion_ocellaris
ENSXMAG00000024840	-	100	97.248	ENSAPEG00000016590	rab11bb	100	97.248	Amphiprion_percula
ENSXMAG00000024840	-	100	99.083	ENSATEG00000023725	-	100	99.083	Anabas_testudineus
ENSXMAG00000024840	-	100	97.248	ENSATEG00000017696	rab11bb	100	97.248	Anabas_testudineus
ENSXMAG00000024840	-	94	98.058	ENSAPLG00000011046	-	94	98.058	Anas_platyrhynchos
ENSXMAG00000024840	-	100	97.248	ENSACLG00000007076	rab11bb	100	97.248	Astatotilapia_calliptera
ENSXMAG00000024840	-	100	99.541	ENSACLG00000005446	-	100	99.541	Astatotilapia_calliptera
ENSXMAG00000024840	-	100	98.624	ENSAMXG00000042655	rab11bb	100	98.624	Astyanax_mexicanus
ENSXMAG00000024840	-	100	96.330	ENSAMXG00000037623	-	100	96.330	Astyanax_mexicanus
ENSXMAG00000024840	-	100	96.330	ENSBTAG00000002475	RAB11B	100	96.330	Bos_taurus
ENSXMAG00000024840	-	96	94.737	ENSCHIG00000022426	-	93	94.737	Capra_hircus
ENSXMAG00000024840	-	100	96.330	ENSCATG00000029188	-	100	96.330	Cercocebus_atys
ENSXMAG00000024840	-	100	97.248	ENSCPBG00000017056	-	100	97.248	Chrysemys_picta_bellii
ENSXMAG00000024840	-	100	99.083	ENSCSEG00000007239	-	100	99.083	Cynoglossus_semilaevis
ENSXMAG00000024840	-	100	97.248	ENSCSEG00000012149	rab11bb	100	97.248	Cynoglossus_semilaevis
ENSXMAG00000024840	-	100	97.248	ENSCVAG00000017021	-	100	97.248	Cyprinodon_variegatus
ENSXMAG00000024840	-	100	98.624	ENSCVAG00000019718	-	100	98.624	Cyprinodon_variegatus
ENSXMAG00000024840	-	100	95.413	ENSCVAG00000019751	-	100	95.413	Cyprinodon_variegatus
ENSXMAG00000024840	-	100	97.248	ENSDARG00000090086	rab11bb	100	97.248	Danio_rerio
ENSXMAG00000024840	-	99	94.009	ENSETEG00000000905	-	99	94.009	Echinops_telfairi
ENSXMAG00000024840	-	99	93.953	ENSEASG00005003708	-	99	93.953	Equus_asinus_asinus
ENSXMAG00000024840	-	99	93.953	ENSECAG00000000716	RAB11B	99	93.953	Equus_caballus
ENSXMAG00000024840	-	100	98.165	ENSELUG00000020948	-	98	100.000	Esox_lucius
ENSXMAG00000024840	-	100	97.248	ENSELUG00000000916	-	100	97.248	Esox_lucius
ENSXMAG00000024840	-	100	97.248	ENSELUG00000021148	rab11bb	100	97.248	Esox_lucius
ENSXMAG00000024840	-	100	97.248	ENSFALG00000011828	-	100	97.248	Ficedula_albicollis
ENSXMAG00000024840	-	100	97.248	ENSFHEG00000018353	rab11bb	100	97.248	Fundulus_heteroclitus
ENSXMAG00000024840	-	100	99.083	ENSFHEG00000022676	-	100	99.083	Fundulus_heteroclitus
ENSXMAG00000024840	-	99	95.370	ENSGMOG00000009668	-	99	95.370	Gadus_morhua
ENSXMAG00000024840	-	100	97.248	ENSGMOG00000009211	rab11bb	100	97.248	Gadus_morhua
ENSXMAG00000024840	-	100	97.248	ENSGALG00000000613	RAB11B	100	97.248	Gallus_gallus
ENSXMAG00000024840	-	100	97.248	ENSGAFG00000007102	rab11bb	100	97.248	Gambusia_affinis
ENSXMAG00000024840	-	100	94.954	ENSGACG00000013297	-	99	94.954	Gasterosteus_aculeatus
ENSXMAG00000024840	-	100	96.789	ENSGACG00000015479	rab11bb	100	96.789	Gasterosteus_aculeatus
ENSXMAG00000024840	-	100	96.330	ENSGGOG00000014516	RAB11B	100	96.330	Gorilla_gorilla
ENSXMAG00000024840	-	100	99.541	ENSHBUG00000009947	-	100	99.541	Haplochromis_burtoni
ENSXMAG00000024840	-	100	97.248	ENSHBUG00000014777	rab11bb	100	97.248	Haplochromis_burtoni
ENSXMAG00000024840	-	100	96.330	ENSHCOG00000000954	-	100	96.330	Hippocampus_comes
ENSXMAG00000024840	-	100	97.706	ENSHCOG00000002423	rab11bb	100	97.706	Hippocampus_comes
ENSXMAG00000024840	-	100	93.119	ENSHCOG00000000985	-	100	93.119	Hippocampus_comes
ENSXMAG00000024840	-	100	96.330	ENSIPUG00000025100	rab11b	100	96.330	Ictalurus_punctatus
ENSXMAG00000024840	-	100	98.165	ENSIPUG00000019927	rab11bb	100	98.165	Ictalurus_punctatus
ENSXMAG00000024840	-	100	99.541	ENSKMAG00000006170	-	100	99.541	Kryptolebias_marmoratus
ENSXMAG00000024840	-	100	97.248	ENSKMAG00000009033	rab11bb	100	97.248	Kryptolebias_marmoratus
ENSXMAG00000024840	-	100	91.284	ENSLBEG00000005981	-	100	91.284	Labrus_bergylta
ENSXMAG00000024840	-	100	97.248	ENSLBEG00000015248	rab11bb	100	97.248	Labrus_bergylta
ENSXMAG00000024840	-	100	98.624	ENSLBEG00000004172	-	100	98.624	Labrus_bergylta
ENSXMAG00000024840	-	100	97.248	ENSLACG00000016857	-	100	97.248	Latimeria_chalumnae
ENSXMAG00000024840	-	100	96.330	ENSMFAG00000003654	RAB11B	100	96.330	Macaca_fascicularis
ENSXMAG00000024840	-	100	96.330	ENSMLEG00000030601	-	100	96.330	Mandrillus_leucophaeus
ENSXMAG00000024840	-	100	96.789	ENSMAMG00000006378	rab11bb	100	96.789	Mastacembelus_armatus
ENSXMAG00000024840	-	100	98.165	ENSMAMG00000018533	-	100	98.165	Mastacembelus_armatus
ENSXMAG00000024840	-	100	99.541	ENSMZEG00005010975	-	100	99.541	Maylandia_zebra
ENSXMAG00000024840	-	100	97.248	ENSMZEG00005003352	rab11bb	100	97.248	Maylandia_zebra
ENSXMAG00000024840	-	100	96.330	ENSMICG00000034065	-	100	96.330	Microcebus_murinus
ENSXMAG00000024840	-	94	97.073	ENSMMOG00000007917	rab11bb	100	97.073	Mola_mola
ENSXMAG00000024840	-	99	95.392	ENSMMOG00000001238	-	99	95.392	Mola_mola
ENSXMAG00000024840	-	100	99.541	ENSMMOG00000001250	-	100	99.541	Mola_mola
ENSXMAG00000024840	-	100	97.248	ENSMODG00000003841	-	100	97.248	Monodelphis_domestica
ENSXMAG00000024840	-	100	97.248	ENSMALG00000022187	rab11bb	100	97.248	Monopterus_albus
ENSXMAG00000024840	-	94	88.406	ENSMLUG00000006677	-	100	88.406	Myotis_lucifugus
ENSXMAG00000024840	-	100	99.541	ENSNBRG00000023885	-	100	99.541	Neolamprologus_brichardi
ENSXMAG00000024840	-	100	97.248	ENSNBRG00000000372	rab11bb	100	97.248	Neolamprologus_brichardi
ENSXMAG00000024840	-	100	97.248	ENSMEUG00000003686	-	100	97.248	Notamacropus_eugenii
ENSXMAG00000024840	-	100	97.248	ENSONIG00000010435	rab11bb	100	97.248	Oreochromis_niloticus
ENSXMAG00000024840	-	100	99.541	ENSONIG00000002544	-	100	99.541	Oreochromis_niloticus
ENSXMAG00000024840	-	55	94.737	ENSOANG00000031567	-	82	94.737	Ornithorhynchus_anatinus
ENSXMAG00000024840	-	99	97.696	ENSORLG00000015284	-	72	97.696	Oryzias_latipes
ENSXMAG00000024840	-	100	96.789	ENSORLG00000013938	rab11bb	100	96.789	Oryzias_latipes
ENSXMAG00000024840	-	100	96.789	ENSORLG00020019393	rab11bb	100	96.789	Oryzias_latipes_hni
ENSXMAG00000024840	-	99	97.696	ENSORLG00020020844	RAB11B	99	97.696	Oryzias_latipes_hni
ENSXMAG00000024840	-	100	96.789	ENSORLG00015020173	rab11bb	100	96.789	Oryzias_latipes_hsok
ENSXMAG00000024840	-	99	97.696	ENSORLG00015016999	RAB11B	99	97.696	Oryzias_latipes_hsok
ENSXMAG00000024840	-	100	98.624	ENSOMEG00000002562	-	100	98.624	Oryzias_melastigma
ENSXMAG00000024840	-	100	97.248	ENSOMEG00000017806	-	100	97.248	Oryzias_melastigma
ENSXMAG00000024840	-	100	96.330	ENSPPAG00000028589	-	100	96.330	Pan_paniscus
ENSXMAG00000024840	-	100	96.330	ENSPTRG00000010422	RAB11B	100	96.330	Pan_troglodytes
ENSXMAG00000024840	-	100	96.330	ENSPANG00000007765	-	100	96.330	Papio_anubis
ENSXMAG00000024840	-	100	97.248	ENSPKIG00000011640	rab11bb	100	97.248	Paramormyrops_kingsleyae
ENSXMAG00000024840	-	98	96.729	ENSPKIG00000001389	-	69	96.729	Paramormyrops_kingsleyae
ENSXMAG00000024840	-	100	96.789	ENSPKIG00000011703	-	100	96.789	Paramormyrops_kingsleyae
ENSXMAG00000024840	-	98	93.151	ENSPSIG00000010242	-	85	93.151	Pelodiscus_sinensis
ENSXMAG00000024840	-	100	97.706	ENSPMGG00000014333	-	100	97.706	Periophthalmus_magnuspinnatus
ENSXMAG00000024840	-	99	94.009	ENSPMGG00000014336	-	99	94.009	Periophthalmus_magnuspinnatus
ENSXMAG00000024840	-	100	97.248	ENSPMGG00000009435	rab11bb	100	97.248	Periophthalmus_magnuspinnatus
ENSXMAG00000024840	-	97	96.698	ENSPCIG00000020371	-	99	96.698	Phascolarctos_cinereus
ENSXMAG00000024840	-	100	99.541	ENSPFOG00000006224	-	100	99.541	Poecilia_formosa
ENSXMAG00000024840	-	100	97.248	ENSPFOG00000024114	-	100	97.248	Poecilia_formosa
ENSXMAG00000024840	-	100	97.248	ENSPLAG00000001598	rab11bb	100	97.248	Poecilia_latipinna
ENSXMAG00000024840	-	100	99.541	ENSPLAG00000014207	-	100	99.541	Poecilia_latipinna
ENSXMAG00000024840	-	100	97.248	ENSPMEG00000012389	rab11bb	100	97.248	Poecilia_mexicana
ENSXMAG00000024840	-	100	99.541	ENSPMEG00000007842	-	100	99.541	Poecilia_mexicana
ENSXMAG00000024840	-	100	99.083	ENSPREG00000006336	-	100	99.083	Poecilia_reticulata
ENSXMAG00000024840	-	100	97.248	ENSPREG00000014269	rab11bb	100	97.248	Poecilia_reticulata
ENSXMAG00000024840	-	100	97.248	ENSPNYG00000004098	rab11bb	100	97.248	Pundamilia_nyererei
ENSXMAG00000024840	-	100	99.541	ENSPNYG00000019611	-	100	99.541	Pundamilia_nyererei
ENSXMAG00000024840	-	100	96.330	ENSRROG00000037812	-	100	96.330	Rhinopithecus_roxellana
ENSXMAG00000024840	-	97	96.226	ENSSHAG00000006816	-	97	96.226	Sarcophilus_harrisii
ENSXMAG00000024840	-	100	73.853	ENSSFOG00015006245	-	100	73.853	Scleropages_formosus
ENSXMAG00000024840	-	100	96.789	ENSSFOG00015009042	rab11bb	100	96.789	Scleropages_formosus
ENSXMAG00000024840	-	100	95.872	ENSSMAG00000018613	-	100	95.872	Scophthalmus_maximus
ENSXMAG00000024840	-	100	96.789	ENSSMAG00000004922	rab11bb	100	96.789	Scophthalmus_maximus
ENSXMAG00000024840	-	100	97.248	ENSSDUG00000013558	rab11bb	100	97.248	Seriola_dumerili
ENSXMAG00000024840	-	100	99.541	ENSSDUG00000002934	-	100	99.541	Seriola_dumerili
ENSXMAG00000024840	-	100	99.541	ENSSLDG00000005275	-	100	99.541	Seriola_lalandi_dorsalis
ENSXMAG00000024840	-	100	97.248	ENSSLDG00000020676	rab11bb	100	97.248	Seriola_lalandi_dorsalis
ENSXMAG00000024840	-	100	97.248	ENSSPUG00000002243	-	100	97.248	Sphenodon_punctatus
ENSXMAG00000024840	-	100	97.248	ENSSPAG00000011419	rab11bb	100	97.248	Stegastes_partitus
ENSXMAG00000024840	-	100	99.541	ENSSPAG00000014559	-	100	99.541	Stegastes_partitus
ENSXMAG00000024840	-	100	97.248	ENSTGUG00000000084	-	100	97.248	Taeniopygia_guttata
ENSXMAG00000024840	-	100	97.248	ENSTRUG00000022029	rab11bb	100	97.248	Takifugu_rubripes
ENSXMAG00000024840	-	99	95.392	ENSTRUG00000021614	-	99	95.392	Takifugu_rubripes
ENSXMAG00000024840	-	99	99.074	ENSTRUG00000021619	-	100	99.074	Takifugu_rubripes
ENSXMAG00000024840	-	100	96.330	ENSTNIG00000011081	rab11bb	100	96.330	Tetraodon_nigroviridis
ENSXMAG00000024840	-	93	96.552	ENSTNIG00000002003	-	100	96.552	Tetraodon_nigroviridis
ENSXMAG00000024840	-	99	99.074	ENSTNIG00000013182	-	100	99.074	Tetraodon_nigroviridis
ENSXMAG00000024840	-	99	94.931	ENSTNIG00000013184	-	99	94.931	Tetraodon_nigroviridis
ENSXMAG00000024840	-	94	97.073	ENSUAMG00000006639	-	99	97.073	Ursus_americanus
ENSXMAG00000024840	-	100	96.347	ENSXETG00000025484	rab11b.1	99	96.347	Xenopus_tropicalis
ENSXMAG00000024840	-	100	97.248	ENSXCOG00000008042	-	100	97.248	Xiphophorus_couchianus
ENSXMAG00000024840	-	100	99.541	ENSXCOG00000009190	-	100	99.541	Xiphophorus_couchianus
ENSXMAG00000024840	-	100	97.248	ENSXMAG00000011926	rab11bb	100	97.248	Xiphophorus_maculatus