EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000025089 (Gene tree)
Gene ID: 102237849
Gene Symbol: -
Alias: -
Full Name: uncharacterized LOC102237849
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 7538 bases
Position: chr5:10389172-10396709
Accession: 102237849
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000007232	MMR_HSR1	PF01926.23	3.8e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000022662	-	4054	XM_005797578	ENSXMAP00000038737	905 (aa)	XP_005797635	-
ENSXMAT00000040352	-	4198	-	ENSXMAP00000027082	953 (aa)	-	-
ENSXMAT00000007240	-	864	-	ENSXMAP00000007232	287 (aa)	-	M3ZYD8

Gene Model

Click here to download ENSXMAG00000025089's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000025089's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000025089	-	90	52.764	ENSAMXG00000040688	-	63	52.764	Astyanax_mexicanus
ENSXMAG00000025089	-	79	45.763	ENSIPUG00000004642	si:dkeyp-69e1.8	62	45.763	Ictalurus_punctatus
ENSXMAG00000025089	-	79	75.330	ENSMMOG00000008509	-	74	75.330	Mola_mola
ENSXMAG00000025089	-	92	93.585	ENSPFOG00000013403	-	81	93.585	Poecilia_formosa
ENSXMAG00000025089	-	93	93.233	ENSPMEG00000008621	-	51	93.233	Poecilia_mexicana
ENSXMAG00000025089	-	93	93.985	ENSPREG00000013750	-	51	93.985	Poecilia_reticulata
ENSXMAG00000025089	-	89	52.212	ENSPNAG00000000165	-	66	48.649	Pygocentrus_nattereri
ENSXMAG00000025089	-	86	97.166	ENSXCOG00000013594	-	96	97.166	Xiphophorus_couchianus