EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000025174 (Gene tree)
Gene ID: 111609826
Gene Symbol: -
Alias: -
Full Name: gastrula zinc finger protein xFG20-1-like
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 3547 bases
Position: chr10:16211108-16214654
Accession: 111609826
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000040009	zf-C2H2	PF00096.26	1.3e-28	1	6
ENSXMAP00000040009	zf-C2H2	PF00096.26	1.3e-28	2	6
ENSXMAP00000040009	zf-C2H2	PF00096.26	1.3e-28	3	6
ENSXMAP00000040009	zf-C2H2	PF00096.26	1.3e-28	4	6
ENSXMAP00000040009	zf-C2H2	PF00096.26	1.3e-28	5	6
ENSXMAP00000040009	zf-C2H2	PF00096.26	1.3e-28	6	6
ENSXMAP00000040009	zf-met	PF12874.7	1.1e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000029914	-	2419	XM_023340440	ENSXMAP00000040009	439 (aa)	XP_023196208	UPI000C6D8069

Gene Model

Click here to download ENSXMAG00000025174's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000025174's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000025174	-	50	43.627	ENSAPOG00000023008	-	56	43.627	Acanthochromis_polyacanthus
ENSXMAG00000025174	-	57	38.012	ENSAPOG00000021966	-	56	38.012	Acanthochromis_polyacanthus
ENSXMAG00000025174	-	52	36.634	ENSAPOG00000009709	-	54	36.634	Acanthochromis_polyacanthus
ENSXMAG00000025174	-	50	44.500	ENSACIG00000022738	-	92	45.902	Amphilophus_citrinellus
ENSXMAG00000025174	-	56	40.741	ENSAOCG00000020652	-	55	40.741	Amphiprion_ocellaris
ENSXMAG00000025174	-	50	43.137	ENSAOCG00000016409	-	55	43.137	Amphiprion_ocellaris
ENSXMAG00000025174	-	57	48.077	ENSAOCG00000022529	-	57	43.103	Amphiprion_ocellaris
ENSXMAG00000025174	-	57	34.538	ENSAPEG00000009553	-	59	34.538	Amphiprion_percula
ENSXMAG00000025174	-	50	43.137	ENSAPEG00000008746	-	55	43.137	Amphiprion_percula
ENSXMAG00000025174	-	50	41.667	ENSATEG00000015238	-	60	41.667	Anabas_testudineus
ENSXMAG00000025174	-	62	40.909	ENSATEG00000022064	-	94	43.519	Anabas_testudineus
ENSXMAG00000025174	-	63	38.824	ENSATEG00000021602	-	85	38.926	Anabas_testudineus
ENSXMAG00000025174	-	56	37.615	ENSATEG00000014684	-	90	39.512	Anabas_testudineus
ENSXMAG00000025174	-	54	47.312	ENSACLG00000011239	-	73	47.312	Astatotilapia_calliptera
ENSXMAG00000025174	-	50	42.647	ENSACLG00000015462	-	63	42.647	Astatotilapia_calliptera
ENSXMAG00000025174	-	91	44.681	ENSACLG00000020333	-	93	40.667	Astatotilapia_calliptera
ENSXMAG00000025174	-	91	44.681	ENSACLG00000006718	-	93	40.667	Astatotilapia_calliptera
ENSXMAG00000025174	-	53	40.722	ENSACLG00000019349	-	72	40.722	Astatotilapia_calliptera
ENSXMAG00000025174	-	51	38.798	ENSACLG00000014365	-	90	38.798	Astatotilapia_calliptera
ENSXMAG00000025174	-	81	44.643	ENSACLG00000005795	-	85	43.860	Astatotilapia_calliptera
ENSXMAG00000025174	-	100	64.350	ENSCVAG00000020968	-	100	64.126	Cyprinodon_variegatus
ENSXMAG00000025174	-	50	41.951	ENSCVAG00000019097	-	57	41.951	Cyprinodon_variegatus
ENSXMAG00000025174	-	100	66.518	ENSFHEG00000013228	-	99	67.542	Fundulus_heteroclitus
ENSXMAG00000025174	-	50	42.439	ENSFHEG00000003460	-	56	42.439	Fundulus_heteroclitus
ENSXMAG00000025174	-	51	38.889	ENSGMOG00000009187	ZNF626	74	39.698	Gadus_morhua
ENSXMAG00000025174	-	52	42.683	ENSGAFG00000001481	-	80	42.683	Gambusia_affinis
ENSXMAG00000025174	-	64	35.976	ENSGAGG00000015232	-	79	35.976	Gopherus_agassizii
ENSXMAG00000025174	-	91	42.105	ENSHBUG00000013065	-	83	37.427	Haplochromis_burtoni
ENSXMAG00000025174	-	50	43.931	ENSHBUG00000009274	-	91	43.931	Haplochromis_burtoni
ENSXMAG00000025174	-	50	42.157	ENSHBUG00000019377	-	57	42.157	Haplochromis_burtoni
ENSXMAG00000025174	-	51	45.455	ENSKMAG00000000802	-	75	45.455	Kryptolebias_marmoratus
ENSXMAG00000025174	-	50	41.951	ENSKMAG00000015304	-	57	41.951	Kryptolebias_marmoratus
ENSXMAG00000025174	-	50	43.000	ENSLBEG00000008909	-	71	43.000	Labrus_bergylta
ENSXMAG00000025174	-	55	35.270	ENSLBEG00000026457	-	93	35.714	Labrus_bergylta
ENSXMAG00000025174	-	55	39.181	ENSLBEG00000008850	-	53	39.181	Labrus_bergylta
ENSXMAG00000025174	-	51	37.245	ENSLOCG00000017422	-	69	37.245	Lepisosteus_oculatus
ENSXMAG00000025174	-	50	40.686	ENSMAMG00000010902	-	54	40.686	Mastacembelus_armatus
ENSXMAG00000025174	-	91	40.936	ENSMZEG00005025965	-	88	38.372	Maylandia_zebra
ENSXMAG00000025174	-	91	42.105	ENSMZEG00005011812	-	83	37.427	Maylandia_zebra
ENSXMAG00000025174	-	50	41.237	ENSMZEG00005012676	-	88	41.237	Maylandia_zebra
ENSXMAG00000025174	-	65	37.912	ENSMZEG00005022884	-	85	37.674	Maylandia_zebra
ENSXMAG00000025174	-	51	44.118	ENSMZEG00005023565	-	79	44.118	Maylandia_zebra
ENSXMAG00000025174	-	53	43.548	ENSMZEG00005027551	-	91	36.449	Maylandia_zebra
ENSXMAG00000025174	-	50	42.647	ENSMZEG00005018502	-	63	42.647	Maylandia_zebra
ENSXMAG00000025174	-	53	33.758	ENSMZEG00005003951	-	61	33.758	Maylandia_zebra
ENSXMAG00000025174	-	69	33.750	ENSMMOG00000005437	-	72	34.632	Mola_mola
ENSXMAG00000025174	-	50	41.176	ENSMMOG00000009252	-	60	41.176	Mola_mola
ENSXMAG00000025174	-	50	39.394	ENSMALG00000011756	-	61	39.394	Monopterus_albus
ENSXMAG00000025174	-	67	48.077	ENSMALG00000005696	-	57	48.077	Monopterus_albus
ENSXMAG00000025174	-	57	39.823	ENSMALG00000010959	-	98	38.053	Monopterus_albus
ENSXMAG00000025174	-	52	42.353	ENSMALG00000002956	-	86	42.353	Monopterus_albus
ENSXMAG00000025174	-	50	43.137	ENSNBRG00000024179	-	57	43.137	Neolamprologus_brichardi
ENSXMAG00000025174	-	50	42.197	ENSNBRG00000004723	-	92	42.197	Neolamprologus_brichardi
ENSXMAG00000025174	-	53	42.197	ENSONIG00000014012	-	85	42.197	Oreochromis_niloticus
ENSXMAG00000025174	-	51	42.697	ENSONIG00000020667	-	97	42.697	Oreochromis_niloticus
ENSXMAG00000025174	-	51	37.912	ENSONIG00000001986	-	89	37.912	Oreochromis_niloticus
ENSXMAG00000025174	-	50	42.132	ENSONIG00000019139	-	99	42.132	Oreochromis_niloticus
ENSXMAG00000025174	-	53	40.909	ENSONIG00000012374	-	98	40.909	Oreochromis_niloticus
ENSXMAG00000025174	-	51	35.762	ENSPMGG00000008518	-	94	35.762	Periophthalmus_magnuspinnatus
ENSXMAG00000025174	-	92	41.667	ENSPFOG00000018771	-	93	41.667	Poecilia_formosa
ENSXMAG00000025174	-	50	41.463	ENSPFOG00000000667	-	61	41.463	Poecilia_formosa
ENSXMAG00000025174	-	51	40.000	ENSPLAG00000005106	-	72	40.000	Poecilia_latipinna
ENSXMAG00000025174	-	50	41.463	ENSPLAG00000013745	-	71	41.463	Poecilia_latipinna
ENSXMAG00000025174	-	92	40.331	ENSPMEG00000022651	-	97	40.556	Poecilia_mexicana
ENSXMAG00000025174	-	53	41.880	ENSPMEG00000020864	-	86	41.880	Poecilia_mexicana
ENSXMAG00000025174	-	81	44.048	ENSPNYG00000011024	-	85	43.275	Pundamilia_nyererei
ENSXMAG00000025174	-	50	41.327	ENSPNYG00000020737	-	88	39.512	Pundamilia_nyererei
ENSXMAG00000025174	-	68	37.443	ENSPNAG00000025882	-	61	37.443	Pygocentrus_nattereri
ENSXMAG00000025174	-	88	37.356	ENSSMAG00000006155	-	57	40.541	Scophthalmus_maximus
ENSXMAG00000025174	-	53	45.783	ENSSMAG00000013663	-	96	38.462	Scophthalmus_maximus
ENSXMAG00000025174	-	50	34.247	ENSSMAG00000004429	-	91	34.247	Scophthalmus_maximus
ENSXMAG00000025174	-	51	41.919	ENSSMAG00000013828	-	65	41.919	Scophthalmus_maximus
ENSXMAG00000025174	-	85	38.938	ENSSMAG00000006902	-	79	36.800	Scophthalmus_maximus
ENSXMAG00000025174	-	50	41.176	ENSSDUG00000015013	-	61	41.176	Seriola_dumerili
ENSXMAG00000025174	-	50	41.975	ENSSDUG00000023765	-	77	41.975	Seriola_dumerili
ENSXMAG00000025174	-	56	37.688	ENSSDUG00000023764	-	95	37.688	Seriola_dumerili
ENSXMAG00000025174	-	50	41.176	ENSSLDG00000021278	-	61	41.176	Seriola_lalandi_dorsalis
ENSXMAG00000025174	-	71	45.714	ENSSPAG00000007403	-	91	44.118	Stegastes_partitus
ENSXMAG00000025174	-	69	43.590	ENSSPAG00000008950	-	81	44.792	Stegastes_partitus
ENSXMAG00000025174	-	91	38.983	ENSTRUG00000023491	-	95	38.983	Takifugu_rubripes
ENSXMAG00000025174	-	65	45.122	ENSTRUG00000024009	-	50	44.776	Takifugu_rubripes
ENSXMAG00000025174	-	63	42.857	ENSXMAG00000022894	-	54	41.353	Xiphophorus_maculatus
ENSXMAG00000025174	-	92	41.667	ENSXMAG00000024973	-	99	41.667	Xiphophorus_maculatus