EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000025239 (Gene tree)
Gene ID: 106699885
Gene Symbol: -
Alias: -
Full Name: protein SON-like
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 23380 bases
Position: chr24:5315079-5338458
Accession: 106699885
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000035130	dsrm	PF00035.26	2.8e-12	1	1
ENSXMAP00000035130	DND1_DSRM	PF14709.7	1.5e-12	1	1
ENSXMAP00000035130	G-patch	PF01585.23	3e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000036969	-	4152	XM_023329603	ENSXMAP00000035130	949 (aa)	XP_023185371	UPI000C6E2224

Gene Model

Click here to download ENSXMAG00000025239's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000025239's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000025239	-	100	67.149	ENSAPOG00000000559	-	100	65.217	Acanthochromis_polyacanthus
ENSXMAG00000025239	-	100	66.461	ENSAOCG00000004262	-	100	64.431	Amphiprion_ocellaris
ENSXMAG00000025239	-	100	66.975	ENSAPEG00000009136	-	100	64.796	Amphiprion_percula
ENSXMAG00000025239	-	58	82.098	ENSATEG00000012732	-	96	79.070	Anabas_testudineus
ENSXMAG00000025239	-	100	64.382	ENSACLG00000007065	-	100	65.524	Astatotilapia_calliptera
ENSXMAG00000025239	-	57	64.654	ENSAMXG00000038259	-	67	65.187	Astyanax_mexicanus
ENSXMAG00000025239	-	58	65.734	ENSELUG00000003878	-	81	76.316	Esox_lucius
ENSXMAG00000025239	-	100	78.438	ENSFHEG00000019700	-	100	78.438	Fundulus_heteroclitus
ENSXMAG00000025239	-	53	47.647	ENSGALG00000052354	-	81	46.943	Gallus_gallus
ENSXMAG00000025239	-	100	94.731	ENSGAFG00000016463	-	100	94.731	Gambusia_affinis
ENSXMAG00000025239	-	92	65.428	ENSHBUG00000001964	-	96	66.817	Haplochromis_burtoni
ENSXMAG00000025239	-	100	70.619	ENSKMAG00000012003	-	100	70.619	Kryptolebias_marmoratus
ENSXMAG00000025239	-	58	82.847	ENSLBEG00000008600	-	100	65.746	Labrus_bergylta
ENSXMAG00000025239	-	92	66.667	ENSMAMG00000003082	-	96	65.559	Mastacembelus_armatus
ENSXMAG00000025239	-	100	64.382	ENSMZEG00005018999	-	100	65.524	Maylandia_zebra
ENSXMAG00000025239	-	51	69.167	ENSONIG00000003775	-	85	66.985	Oreochromis_niloticus
ENSXMAG00000025239	-	100	58.911	ENSORLG00000027334	-	59	80.146	Oryzias_latipes
ENSXMAG00000025239	-	100	94.427	ENSPLAG00000008338	-	100	94.427	Poecilia_latipinna
ENSXMAG00000025239	-	100	94.526	ENSPMEG00000017611	-	100	94.526	Poecilia_mexicana
ENSXMAG00000025239	-	100	94.427	ENSPREG00000017979	-	100	94.427	Poecilia_reticulata
ENSXMAG00000025239	-	64	58.594	ENSPNAG00000009991	-	69	63.972	Pygocentrus_nattereri
ENSXMAG00000025239	-	100	63.296	ENSSMAG00000000065	-	99	66.404	Scophthalmus_maximus
ENSXMAG00000025239	-	100	67.385	ENSSDUG00000018550	-	100	68.066	Seriola_dumerili
ENSXMAG00000025239	-	100	67.923	ENSSPAG00000014575	-	100	68.635	Stegastes_partitus
ENSXMAG00000025239	-	58	80.146	ENSTRUG00000019967	-	57	80.146	Takifugu_rubripes
ENSXMAG00000025239	-	52	74.286	ENSTNIG00000014468	-	90	74.286	Tetraodon_nigroviridis
ENSXMAG00000025239	-	50	46.639	ENSXETG00000014115	son	99	46.328	Xenopus_tropicalis